mRNA_S-dermatodea_contig10135.95.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: D7G7Q5_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q5_ECTSI) HSP 1 Score: 238 bits (607), Expect = 8.430e-73 Identity = 119/166 (71.69%), Postives = 138/166 (83.13%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQRATITLRAEQAKNSSDLAVFQLAASGCAKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
VANNL+PRFVTL+PATFRFEEVQ+LRF V+DV GSFTTSDASRL + Q SQGTAE ALA++MGAHGQ +PL SPHLP+Q+A+IT+RAEQAKNSSDL VF L C + +KSVFFRISRTAEAG PIPC+KSEVA S GS W +SKV +P+L+NGDP RPL
Sbjct: 87 VANNLSPRFVTLVPATFRFEEVQMLRFDVYDVEGSFTTSDASRLDVRMQTSQGTAECALATIMGAHGQMSVEPLRSPHLPHQKASITIRAEQAKNSSDLVVFDLGMRACPRGNKSVFFRISRTAEAGAPIPCYKSEVAKVSGGSVLWSQSKVGLPVLANGDPHRPL 252
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 2.860e-32 Identity = 76/167 (45.51%), Postives = 104/167 (62.28%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHL-PNQRATITLRAEQAKNSSDLAVFQLAASGCAKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
+ N+L+P+FVT++P TF+FEEVQ LRF+V+DV ++++SDA+ + Q QG AE ALA V+G QT+ L + +RAE+ NS+ LA LA S H S F RISR +E GPPIPCFK+EVA S W K+ + +L+NGDP+RPL
Sbjct: 88 ITNSLDPKFVTIVPVTFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGARRGKGDSPKVVVRAEEVANSNALAEITLAGSNIG--HGS-FLRISRLSEQGPPIPCFKTEVAKGSPPR-PWAPIKISLQVLANGDPYRPL 250
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.310e-30 Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQRAT-ITLRAEQAKNSSDLAVFQLAASGCAKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
++N+L+P+FVT++P TF+FEEVQ LRF+V+DV ++++SDA+ + Q QG AE ALA V+G QT+ L + + +RAE+ N LA LA S K F R+SR +E GPPI CFK+EVA S W K+ + +L+NGDP+RPL
Sbjct: 92 ISNSLDPKFVTIVPVTFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKRGKGGSPKVVVRAEEVANCDGLAQITLAGSNIGKWP---FLRVSRVSEKGPPIRCFKTEVAKGSPPR-PWAPIKISLQVLANGDPYRPL 254
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI) HSP 1 Score: 124 bits (311), Expect = 4.780e-30 Identity = 71/167 (42.51%), Postives = 102/167 (61.08%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQRAT-ITLRAEQAKNSSDLAVFQLAASGCAKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
++N+L+P FVT++P TF+FEEVQ LRF+V+DV ++++SDA+ + Q QG AE LA V+G QT+ L + + +RAE+ NS+ LA LA S K F R+SR +E GPPI CFK+EVA S W ++ + +L+NGDP+RPL
Sbjct: 58 ISNSLDPNFVTIVPVTFKFEEVQTLRFEVYDVDTAYSSSDATLIDPSKQDFQGAAECVLAQVIGGRDQTWEGLLSGAKTGKGGSPKVVVRAEEVANSNGLAEITLAGSNIGKGP---FLRVSRVSEKGPPIRCFKTEVAKGSPPR-PWAPIEISLKVLANGDPYRPL 220
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.770e-19 Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 3
Query: 6 ANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQRA--TITLRAEQAKNSSDLAVFQLAASGCAKSHKS-----VFFRISRTAEAG-PPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
+N L+P+FV LI +RFEE+Q LRF+V+D SF+++ A +L + Q +G AE ALA ++G GQ +T L S P++ TIT+RAE+ + + +L A K +F R+SR+ E G IPC+++EV S +W L D FRPL
Sbjct: 35 SNTLSPQFVRLITMAYRFEEIQYLRFEVYDADTSFSSASADQLDLSKQDEEGVAECALALIVGGAGQAWTGALTSSTNPHKGGLGTITVRAEEVPDQNLAVSLRLQARDLVLQRKQRKAAGMFLRLSRSVEGGGKAIPCYRTEVRR-DKASPQWDTITAPAAALCAADLFRPL 206
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A8J2JT16_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JT16_9HEXA) HSP 1 Score: 67.0 bits (162), Expect = 5.450e-10 Identity = 56/177 (31.64%), Postives = 83/177 (46.89%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPL-------DSPHLPNQRATITLRAEQAKNSSDLAVFQLAASGC----AKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
V NNL+P F + +RFE VQ LRF+V+DV D ++ Q S G E +LA ++ A + T L +S + +ATI+L AE+ ++ D +LA SGC A FF +S+ +A + ++ A S+ S W K+ L NGD R L
Sbjct: 36 VENNLDPDFAEKVTMEYRFESVQALRFEVYDV-------DNISEKLEDQDSLGFVETSLAQIVTAGDEGLTLTLSEVKLIFNSQNAGKPKATISLIAEELQSEKDEVTLKLAGSGCGNWTACLPPKTFFSVSKLNDAEKYLVVYRGRYARGSNPS--WPPLKMTSRALCNGDHDRTL 203
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A8J2PXL1_9HEXA (Hypothetical protein n=4 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2PXL1_9HEXA) HSP 1 Score: 62.0 bits (149), Expect = 3.680e-8 Identity = 53/182 (29.12%), Postives = 86/182 (47.25%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLP----------NQRATITLRAEQAKNSSDLAVFQLAA------SGCAKSHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
V ++LNP FVT + +RFE+VQ LRF+V+DV D++ + S G E +L ++ A + T L + + P + +TI L AE+ + + +LA SGC +F +S+ EAG + +S++A S+ + W+ K+ L NGD R L
Sbjct: 86 VKDDLNPEFVTKVVLDYRFEQVQALRFEVYDV-------DSATAKLGRHDSLGYLETSLGQIVSAGEEGMTVELQTHNAPVLAANGMAANREPSTIILIAEELASEKEEIAVKLAGNSIGSWSGCLPPR--TYFAVSKINEAGKYLIVHRSKMARGSNPT--WQPMKISSRSLCNGDFDREL 256
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A2I0X2X4_9ASPA (Protein BONZAI 1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X2X4_9ASPA) HSP 1 Score: 60.1 bits (144), Expect = 1.620e-7 Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHL---PNQRATITLRAEQAKNSSDLAVFQLAASGCAKSHKSVFFR-------ISRTAEAGPPIPCFKSEV 413
V N+LNP ++ I TF FE +Q L FQ++DV F L +D Q G A L+ V ++ LD + +T+RAE+ +S +F++ CA FF ISRT EAGPPIP +K+EV
Sbjct: 101 VLNSLNPIWIAKIELTFHFELLQPLVFQLYDVDSQFHNVPEKTLKLDEQQFLGQASCFLSEVATKLNRSLILKLDHKEYGKGSQKLGELTVRAEECFSSK--MMFEMIFH-CANLDNKDFFSKSDPFLVISRTTEAGPPIPVYKTEV 244
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: A0A6A5BNQ3_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BNQ3_NAEFO) HSP 1 Score: 59.7 bits (143), Expect = 2.230e-7 Identity = 54/170 (31.76%), Postives = 83/170 (48.82%), Query Frame = 3
Query: 9 NNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQ-RATITLRAEQAKNSSDLAV-FQLAASGCAK----SHKSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
NNLNP+F+ ++FEE+Q L+F V+DV +++S LA D G EV L+ ++ + PL H TIT+R+E+ +N+ D V LA AK S FF IS++A + +KSE+ + W+ ++ M L NGD P+
Sbjct: 62 NNLNPKFIKTFMVAYKFEEIQPLKFLVYDV-----DNESSTLADDDFL--GMCEVKLSDIV-CRPEGLQIPLKDKHGQQMGHGTITIRSEEKRNARDYIVNIGLAGRDLAKMDLFSKSDPFFIISKSA-GNQFVDIYKSEIIMNNLNP-NWKNFEITMQKLCNGDENNPI 221
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Match: UPI001CFD7738 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD7738) HSP 1 Score: 59.3 bits (142), Expect = 3.110e-7 Identity = 55/170 (32.35%), Postives = 73/170 (42.94%), Query Frame = 3
Query: 3 VANNLNPRFVTLIPATFRFEEVQLLRFQVFDVAGSFTTSDASRLAIDSQASQGTAEVALASVMGAHGQTFTQPLDSPHLPNQRATITLRAEQAK-NSSDLAVFQLAASGCAKSH---KSVFFRISRTAEAGPPIPCFKSEVAHASSGSFRWRESKVCMPILSNGDPFRPL 500
V +NLNP FV + FEEVQ L+F V+D+ S T ++ G L + G+ GQ + L H R TI + AEQ N +D QLA AK KS F I G I F+SE + W+ ++ + L NGD RPL
Sbjct: 78 VRDNLNPNFVKSFVLDYFFEEVQHLKFAVYDIDNSTAT-------LNDDDFIGEMTTTLGEICGSRGQKLIKHLCVGHSKTSRGTIIVSAEQINSNVTDDVEIQLAGISLAKMDFFGKSDPFFIIEKLHNGQYINVFQSETIMNTLNPV-WKPFRMPLTKLCNGDVMRPL 239 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10135.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10135.95.1 >prot_S-dermatodea_contig10135.95.1 ID=prot_S-dermatodea_contig10135.95.1|Name=mRNA_S-dermatodea_contig10135.95.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=167bp WSRTTSTRDSSPSSPRPSGSRRCSCFASKSSTSPDPSPRQTRAVWPSTHRback to top mRNA from alignment at S-dermatodea_contig10135:3052..7351- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10135.95.1 ID=mRNA_S-dermatodea_contig10135.95.1|Name=mRNA_S-dermatodea_contig10135.95.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4300bp|location=Sequence derived from alignment at S-dermatodea_contig10135:3052..7351- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10135:3052..7351- >mRNA_S-dermatodea_contig10135.95.1 ID=mRNA_S-dermatodea_contig10135.95.1|Name=mRNA_S-dermatodea_contig10135.95.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at S-dermatodea_contig10135:3052..7351- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |