mRNA_S-dermatodea_contig10107.75.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI) HSP 1 Score: 238 bits (608), Expect = 4.880e-73 Identity = 120/264 (45.45%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 19 LAWFLFLFCCGFVAAAMSSLVLFFRARDVFQIRARSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSSDPRVSKALSRRRKTGL 810
+AWFL + G + + L + R VF+IRARS+ LV+L GA + L + + Q+ V+F+ PN M +F +VC +CCY SR IRLAVL+S R+++PWL SERNH+C C+ L + F LY + +GPFAEL+FA+ A LWR++I Q + +YPLV K DDIFNI ELR +I+L TL G FG + S+ ++AR++N R MG +A+++F S+ P QLVF PL+SSDPRVS+AL++RR+ L
Sbjct: 59 IAWFLLVVSSGLLVVMTGVMFLLIKNRHVFEIRARSACLVMLLGASTMTALAMNMVGQSVVIFNALPNLYTFFMLYFFILVCGSCCYGSRTIRLAVLFSTGTRRVVPWLASERNHVCMCLVLGAGSLGFPLYVMYDVGDGPFAELLFAERAGVLLWRVSIASQAMVLSLYPLVWKTDDIFNISRELRVVIVLTFSTTLIGHFGDNHSSEDVARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRALAKRRQGRL 322
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.080e-31 Identity = 85/240 (35.42%), Postives = 129/240 (53.75%), Query Frame = 1
Query: 76 LVLFFRARDVFQIRARSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGK-FGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSSDPRVSKALSR 792
LVLFFRARDVF+IRARS YLV G ++ + VLF N +++ ++F CY SR IRLAV + P+ R+ MP L SE+ + +++ V + S +Y KIT+ + + A W T+ Q T + P+V +DD+F+I EL II+L LI ++ K F ++ EI +IN +M + T S+LF SV+ P +L F P+ S +++A+ R
Sbjct: 8 LVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDLHAIVLFGTPANYFTNNLLVFFVTFSIASCYISRVIRLAVGFHPKLRRSMPKLMSEKLLIAVSLSIGVMSLSIPIYYKITVPNEDYRDH-----QAGVKWLCTLVLQITQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTGEIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVLR 242
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 102 bits (254), Expect = 6.540e-21 Identity = 67/248 (27.02%), Postives = 121/248 (48.79%), Query Frame = 1
Query: 46 CGFVAAAMSSLVLFFRARDVFQIRARSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINE-GPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTL--------GGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSS 762
C F+ +LV F+R+R + IR RS++LV L G ++ +++V T +++D + + L+F Y RA+RLAV+++PRA+ +PWL ERN+L + ++ + +Y + T+ + A R+ + + C +YP +R VDD+FNI EL + + ++VT+ GG F + S I+ + ++LF S++ P +L PL ++
Sbjct: 72 CCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVC------IYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNIS---------VVFVAVLFCISIVAPLRRLALDPLAAT 304
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 3.790e-19 Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 1
Query: 277 YTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSSDPRVS-KALSRRRKT 804
Y RA+RLAV++ PRA++ +PWL ERNHL A+AVA +Y +T+ E++ +V D L T+ TL ++P +RKVDD+FNI EL + IL LI+ +G K G E+ + TA++ F SV+ P +L PL S R + +A+ RR+T
Sbjct: 48 YICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVW---EVIAKQV--DLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILAIGIKCGL---YFEVDMWTGGNLNFFITAAV-FGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARRET 215
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 5.370e-19 Identity = 57/215 (26.51%), Postives = 109/215 (50.70%), Query Frame = 1
Query: 121 RSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRL-WRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSS 762
RS++LV++ G C++ T+VV V++D + + L+F Y RA+RLAV++ PRA++ +PWL ERN++ + ++V + +Y + T+ + + L + +T+ C +YP +R VDD+FNI EL + + + + + K + R++ ++ I A++LF S++ P +L PL ++
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLAC------IYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVG-NNISIFIAAVLFGISIVDPLRRLAMDPLAAT 210
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 4.450e-15 Identity = 44/162 (27.16%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 277 YTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSS 762
Y RA+RLAV++ P+A++ +PWL ERN++ + + + LY + T+ + K +W ++I +YP +R VDD+F+I EL + +++ +G K D R++ ++ + A+++F+ SV+ P +L F PL ++
Sbjct: 37 YICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWE----IIPKQTDILIW-VSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLG-NNLFLLFAAVVFSVSVVDPLRRLAFDPLAAT 192
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 6.200e-13 Identity = 48/166 (28.92%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 118 ARSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITIN--EGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVT 609
ARS++LV L G ++ +++V T +++D + + L+F Y RA+RLAV+++PRA++ +PWL ERN+L + ++ + +Y + T+ + + K A R+ + + C +YP +R VDD+FNI EL + + +VT
Sbjct: 18 ARSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQA-RVLAVMLVC------IYPFIRNVDDLFNISKELITVTVTIAVVT 176
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: D7G1D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D5_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-10 Identity = 42/148 (28.38%), Postives = 71/148 (47.97%), Query Frame = 1
Query: 49 GFVAAAMSSLVLF--FRARDVFQIRARSSYLVLLAGACIVATLVVLAITQTYVLFDYTPNSLASHMTLYFAVVCSNCCYTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLW 486
G + ++VLF F+ R+V +IRARS+YLV+ G C++A L + L + N H +F + CY R IRL V +SPR ++ +PW+ E+ + + +++ + + Y I G + F D +W
Sbjct: 33 GSAMLVLGTMVLFKMFQYRNVLEIRARSAYLVMTLGLCLLAALTLDVHVMCRTLLGWPSNVFLVHSGYFFIIFSIESCYIWRVIRLGVSFSPRVKRFIPWVMWEKLAVVSSLSIGAVSTAIPTYYYIEYGGGDDHDR-FLAAELDAMW 179
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 3.270e-9 Identity = 56/177 (31.64%), Postives = 78/177 (44.07%), Query Frame = 1
Query: 277 YTSRAIRLAVLYSPRARKLMPWLTSERNHLCACVALAVAAWSFLLYDKITINEGPFAELVFAKVAADRLWRITIGCQCTLTGVYPLVRKVDDIFNIGPELRAIIILQLIVTLGGKFGKDSSNSEIARYINLRSMGIATASILFAFSVMYPAWQLVFHPLQSSDPR-VSKALSRRRKT 804
Y RA+RLAV++ PRA++ +PWL ERNHL A VA +Y +T+ +W KVDD+FNI EL + IL LI+ +G K G E+ + TA++ F SV+ P L PL S R + +A+ RR T
Sbjct: 48 YICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLE----------------VW------------------KVDDLFNISRELIIVTILFLILAIGIKCGL---YYEVDMWTGGNLNFFITAAV-FGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDT 186 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10107.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10107.75.1 >prot_S-dermatodea_contig10107.75.1 ID=prot_S-dermatodea_contig10107.75.1|Name=mRNA_S-dermatodea_contig10107.75.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=274bp MFTCAALAWFLFLFCCGFVAAAMSSLVLFFRARDVFQIRARSSYLVLLAGback to top mRNA from alignment at S-dermatodea_contig10107:123..7560- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10107.75.1 ID=mRNA_S-dermatodea_contig10107.75.1|Name=mRNA_S-dermatodea_contig10107.75.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7438bp|location=Sequence derived from alignment at S-dermatodea_contig10107:123..7560- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10107:123..7560- >mRNA_S-dermatodea_contig10107.75.1 ID=mRNA_S-dermatodea_contig10107.75.1|Name=mRNA_S-dermatodea_contig10107.75.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at S-dermatodea_contig10107:123..7560- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |