mRNA_S-dermatodea_contig10080.60.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: D8LMR0_ECTSI (MOSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR0_ECTSI) HSP 1 Score: 177 bits (448), Expect = 3.990e-52 Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 QPLTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGFRTSFADGFPILLAAEESLEELNSRM-----DKEETIGMERFRPKWV 378
+PL LSAPG+ SLEVPVVRK+GA GP AGG++VEVG+W DTC+A+DQG+ A WL FL ++NLRLVRM DG+VR TDP YG GFRT FADGFP+LL AEESLEELNSR+ ++ +GM+RFRP V
Sbjct: 122 EPLVLSAPGVASLEVPVVRKVGAGGPAAGGELVEVGVWKDTCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRTGFADGFPMLLVAEESLEELNSRIAATGDGEQAAVGMDRFRPNIV 252
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A7S2W2F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2F0_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.180e-29 Identity = 66/125 (52.80%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGFRTSFADGFPILLAAEESLEELNSRMDKEET-IGMERFRPKWV 378
L L+APGM L VPV R G P V V +WS R VDQG+ A WLS FL+ + LRLVR DGY+R+TDP++ G+RT+++DGFP+L+A+EESL ELN RM K + I M RFRP V
Sbjct: 121 LVLTAPGMEPLRVPVRR--GWFVPR-----VRVTVWSTPYRGVDQGDVAAKWLSSFLQRDGLRLVRFPDGYIRETDPEFAKGYRTAYSDGFPLLVASEESLGELNRRMGKSKPDIPMNRFRPNVV 238
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A835Z5C1_9STRA (MOSC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5C1_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.810e-29 Identity = 65/125 (52.00%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 4 PLTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGFRTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
PL + APGM L VP R RG + G V VG+W D C +DQG A WLS L LRL+R D + R TDP YG GF T+++DGFP+LLA+EESLE+LN+R+ + IGMERFRP V
Sbjct: 124 PLIIKAPGMPELVVPARR----RG-DPGAKEVPVGVWGDQCTGIDQGEETATWLSRCLGEPGLRLLRYDDAFTRGTDPAYGRGFFTAYSDGFPLLLASEESLEDLNARLAQ--PIGMERFRPNVV 241
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A482SPP9_9ARCH (MOSC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPP9_9ARCH) HSP 1 Score: 99.4 bits (246), Expect = 1.670e-23 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVD-QGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGFRTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
+ ++APGM L ++ R P G +V +WSD C AV+ N W + FL +++LVRM D +VR+TDP + +TSFADG+P LLA+E SLE+LNS+MDK I MERFRP V
Sbjct: 1 MVITAPGMPEL------RVSLRTPS--GPTQKVKVWSDICDAVEITDNNCQQWFATFLNAPDVKLVRMADSFVRKTDPKFAPNGQTSFADGYPFLLASEGSLEDLNSKMDK--PITMERFRPNIV 115
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A7W1I5B1_9CHLR (MOSC domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1I5B1_9CHLR) HSP 1 Score: 94.7 bits (234), Expect = 4.820e-21 Identity = 55/125 (44.00%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYG-IGFRTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
L L+AP M L +P+ + GD ++ +W DTC A+DQG A W + FL ++ RL+RM + + RQ DP Y IG + FADGFP+LL +EESL +LNSR+ E + M RFRP V
Sbjct: 80 LHLAAPEMPPLTIPIATR---------GDARDIVVWRDTCPAIDQGPESAAWFTAFLGLD-CRLMRMAEDHQRQVDPAYAEIGDQVGFADGFPVLLISEESLADLNSRL--ETPLPMNRFRPNVV 192
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A850ANC1_9CHLR (MOSC domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A850ANC1_9CHLR) HSP 1 Score: 93.6 bits (231), Expect = 1.010e-20 Identity = 60/127 (47.24%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIW-SDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGF--RTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
+TLSAPG SL+ PV +A G V IW S AVDQG+ A W SE+L+ +RLVR+ DGY R+ + +Y + T FADG+PILL AEESL++LNSR+D + M RFRP V
Sbjct: 66 ITLSAPGFDSLQFPV---------KASGHTFPVQIWGSHGVPAVDQGDETAEWFSEWLDAP-VRLVRIADGYKRKVNAEYAVNEDDHTGFADGYPILLIAEESLQDLNSRLDS--PLPMNRFRPNLV 180
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A1V9Z9X7_9STRA (Mosc domain protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9X7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.410e-20 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGFRTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
+TL+APGM +L VPVV K G+ ++V +W D ++VDQG+ A W+ +FL LR V+ D + R DP + G T FADGFPIL+A + S++E++++ + + M+RFRP V
Sbjct: 229 ITLTAPGMPNLVVPVVNK---------GNELKVRVWKDYIQSVDQGDAAAEWIVKFLATPELRFVKFKDDFCRPCDPKFAPGHSTGFADGFPILIACQASIDEMSAQAKHK--VEMDRFRPNIV 341
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A7S3JU38_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU38_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.910e-20 Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 QPLTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGI-GFRTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
+P+ L AP M LEVPV+ + G + V W D A DQG+ A WLS+FL + LRLVRM R D Y + G RT F+DGFPILLA+ SLE+LN+++ K + M+RFRP V
Sbjct: 113 KPIILKAPDMTDLEVPVIIR---------GKKIIVRCWEDQIEAYDQGDEAAQWLSDFLTIPGLRLVRMAPLARRLVDKKYVMRGTRTGFSDGFPILLASNASLEDLNAKI-KTSNVPMDRFRPNIV 229
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A431L340_9BACT (MOSC domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A431L340_9BACT) HSP 1 Score: 91.3 bits (225), Expect = 8.070e-20 Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGF--RTSFADGFPILLAAEESLEELNSRMDKEETIGMERFRPKWV 378
LTL+APGM + VPV + G R V +WS+ CRA DQG+ A W S +L E+ RLVRM + + RQ D Y + FADGFPILL +EESL +LN+R+ + M RFRP V
Sbjct: 70 LTLNAPGMEKIIVPVTDQFGQR---------RVTVWSNACRADDQGDAAAQWFSRYLG-EDCRLVRMSNTHKRQVDQRYAKRKTDQVGFADGFPILLISEESLNDLNNRLPT--ALPMNRFRPNIV 183
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Match: A0A2W4R7X7_9CHLR (MOSC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4R7X7_9CHLR) HSP 1 Score: 91.3 bits (225), Expect = 9.510e-20 Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 7 LTLSAPGMVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLEMENLRLVRMGDGYVRQTDPDYGIGF-RTSFADGFPILLAAEESLEELNSRMDK--EETIGMERFRPKWV 378
L+L+APGM + +P+ E G V IW DTC+ D+G+ A WLS++L+ RLVRM D YVR+ D Y F + FADG+P+LLA E SL+ELN R+ + + M RFRP V
Sbjct: 71 LSLTAPGMPEIRIPL--------EERSGPTRRVVIWRDTCKGADEGDEAARWLSDYLDYP-ARLVRMPDDYVRRVDSRYSPQFAQVGFADGYPLLLAQEASLKELNHRLAARGKMPVPMSRFRPSVV 188 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10080.60.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10080.60.1 >prot_S-dermatodea_contig10080.60.1 ID=prot_S-dermatodea_contig10080.60.1|Name=mRNA_S-dermatodea_contig10080.60.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp MVSLEVPVVRKIGARGPEAGGDVVEVGIWSDTCRAVDQGNTVALWLSEFLback to top mRNA from alignment at S-dermatodea_contig10080:6999..7988- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10080.60.1 ID=mRNA_S-dermatodea_contig10080.60.1|Name=mRNA_S-dermatodea_contig10080.60.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=990bp|location=Sequence derived from alignment at S-dermatodea_contig10080:6999..7988- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10080:6999..7988- >mRNA_S-dermatodea_contig10080.60.1 ID=mRNA_S-dermatodea_contig10080.60.1|Name=mRNA_S-dermatodea_contig10080.60.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at S-dermatodea_contig10080:6999..7988- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |