mRNA_S-dermatodea_contig10077.57.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10077.57.1
Unique NamemRNA_S-dermatodea_contig10077.57.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 2.410e-89
Identity = 145/197 (73.60%), Postives = 168/197 (85.28%), Query Frame = 2 
Query:  254 GDMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            GD+KYWD+SYGKTLD+L+GFI   ESGSGDAR+DA+S A +SLKRL GM+RSYNLEIKL++DP  K HYNLEK++KD+R A LQ+R  AA++ G S RD LFGGRRDVE+G     ++AEAKL EAD YQDKTEAA+KNMIGVLQETE TAD TA+ELTNQR+QL RITE+  EIDSLLTRADRLVKVFSKRMMTDK
Sbjct:    4 GDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKASGDSTRDELFGGRRDVESGEA-QGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDK 199
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.490e-45
Identity = 93/199 (46.73%), Postives = 132/199 (66.33%), Query Frame = 2 
Query:  251 LGDMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSG-GQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            +GD+KYWD+SYGK LDEL   + A +  S   ++  +++A Q+++RL GMKRSYNLEIKLM+D   K  Y  EK  KD +L  L+A+L  A++    S + +LF GR   E       +TA+ KLD+A+  Q+KTEA +KN+I VL++TEE    TA  L  QR Q+  ITE  +E+D +LTRA++L+ VFS+R+ TDK
Sbjct:    1 MGDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGRAAEEP----KVKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDK 195
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.910e-34
Identity = 87/201 (43.28%), Postives = 121/201 (60.20%), Query Frame = 2 
Query:  251 LGDMKYWDSSYGKTLDELEGFI-VAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQS--GGQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            +GD+++WD +YG  LD LE  +    E+ +   RD   S+A  +++RL G+KRSYNLEIKL +D   K  Y   K  KD RL  L+A+L  A+   G +++R ALF GR  +E      +  A+AKLD+A   QDKTEA +KNM+ VL +TEE     A  L +QR Q+  I E+   +   LTRA +L+ VF KR+ TDK
Sbjct:    1 MGDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAERAALFDGRA-IEM-----APAADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDK 195
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.540e-18
Identity = 61/198 (30.81%), Postives = 112/198 (56.57%), Query Frame = 2 
Query:  257 DMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKK-DTRLAALQARLGAAQSGGQSKRDALFGGRRDVE-TGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            D++YWD      L ELE  I   +S  G  ++  ++ +  +LKR+  +K+ YN E+++      + H   EK K  D R+AAL+  L  A++  ++ + +LF G +  + +G    + T +  L EA   QDKTEA+ ++ +G+++ +++    T  E+  Q++Q+  IT+    ++  LTRAD+L++ F +R+ TDK
Sbjct:    3 DIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKT--EANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDK 198
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.180e-16
Identity = 61/197 (30.96%), Postives = 105/197 (53.30%), Query Frame = 2 
Query:  257 DMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALFGGRRDVETGNG-GSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            D+ YW  SY  ++D+ +  + +  +   D R   + +A   LKR GG+K+SY LE++L++D   K +Y     + D R   L+ R+   +   +++R  L       ET    G  +  +  LD+A   QDKTE   +    +++ ++E    T  EL  Q+ Q+  ++ + + I+  L+RADRL++ F+KRMMTDK
Sbjct:   62 DIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRE--RTERSTLL-----QETPAAFGEHKGNDYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDK 251
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.450e-16
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 2 
Query:  260 MKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            M+YWD      +D+ E      +  +  A + A       L+   G+K+S+  E++L+ D   + HY ++  + + R++AL  RL  ++   + +       +R    G G S    +A L +A+  QD  E A+      L E  + A  T  EL NQR+++  ITE A  ID LLTRADRL++ F +RM TD+
Sbjct:    1 MEYWDERINSLIDQGEREAEKLDMDNETAME-ACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNGSREAIEKEHLMRGAQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDR 194
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A7S3L437_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L437_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.240e-14
Identity = 61/197 (30.96%), Postives = 98/197 (49.75%), Query Frame = 2 
Query:  257 DMKYWDSSYGKTLDELEGFIVAAES-GSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALFGGRRDVETGNGGSSQTAEAK-LDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTD 841
            D++YWD +  + +  ++  +        G  +  A+    + ++   G KRS+ +EI+L+QD   +  Y       D +L+ L A   A ++  ++ R  LF G  + E GNG S +    K L  A   QDKT+ +  N   ++ +++E    T  EL  QR  L+ I  EA  ID  L RA++L+K F KRM TD
Sbjct:   54 DIQYWDDTLSEEIQVIQSQLDRVPGLRDGVEKASAIDKLKKKIRGAKGTKRSFKMEIRLVQDVNQRRKYESRLASLDQQLSKLVADCKAIEA--ENNRGELFVGGEEGENGNGMSGEEGGDKMLAAASQLQDKTQDSLANTKNMIAQSKEVGMATLEELERQRGVLENIDREADRIDDNLARAEKLLKQFGKRMATD 248
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A448Z4W2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4W2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.050e-13
Identity = 60/201 (29.85%), Postives = 100/201 (49.75%), Query Frame = 2 
Query:  251 LGDMKYWDSSYGKTLDELEGFIVAAESGSGDA-RDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALF--GGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            + D++YW+ +  + ++++   +   ++ S    R  A+  A  +L+   G KRS+ +EI+L+QD   +  Y     + +  L  L+A L A Q+  +  R  LF  GG  D +             L+EA   QDKT+ A  N   ++ +++E    T  EL  QR+ +  I +EA  +   L RA++LVK F KRM  DK
Sbjct:    1 MADIQYWEDTLVEGVEQIRSILDGVQAMSDPVDRATALEDADDTLRSATGTKRSFKMEIRLVQDQNLRNKYTKRLKRLENELRTLKADLKALQA--EEHRGELFISGGAGDPDGNXXXXXXXXSNMLNEASALQDKTQDALSNTKNMIAQSKEVGVATLEELQRQREVIANIDKEADRMGDNLARAEKLVKEFGKRMSGDK 199
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: A0A1E7F711_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F711_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.050e-13
Identity = 61/200 (30.50%), Postives = 97/200 (48.50%), Query Frame = 2 
Query:  251 LGDMKYWDSSYGKTLDELEGFIVAAESGSGDA-RDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALF-GGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            + D++YW+ +  + ++ +E  +   +S S    +  A+  A   ++   G KRS+ +EI+L+QD   +  Y+      +  L  L+A L A Q+  +  R  LF  G      G    +      L+EA   QDKT+ A  N   ++ +T+E    T  EL  QR  L  I +EA  +   L RA+ LVK F KRM +DK
Sbjct:    1 MADIQYWEDTLTEEIELIEHILDGIQSLSDPVDKASALEEADDKMRSATGTKRSFKMEIRLVQDTNQRSKYSKRLKNMENELRTLKADLKALQA--EEHRGELFISGGASGPDGEQDPTMAGNNMLNEASTVQDKTQDALGNTKAMIAQTKEVGVATLEELQRQRDVLQNIDKEADRMGDNLARAEALVKQFGKRMASDK 198
[Close]
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Match: F0YKX2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX2_AURAN)

HSP 1 Score: 79.0 bits (193), Expect = 9.180e-13
Identity = 60/201 (29.85%), Postives = 106/201 (52.74%), Query Frame = 2 
Query:  257 DMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQSLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQSGGQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMIGVLQETEETADGTAIE-----LTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSKRMMTDK 844
            D++YW  SY   +DEL   + +    SG    D  +     L R   +K+SY LE++L++D   KG +N +  + D R A L+  +   + GG+++R+ L     D            ++ L++A   QD+T+ A    I +++ ++E  + T  E     L +Q++Q+  I+ + + I+  L RAD+L++ F+KRMMTDK
Sbjct:    4 DVEYWSDSYAGAVDELAVRVSSIRELSGCDFRDIAAECDTKLSRAKSIKKSYCLEMRLLRDQKIKGLHNCKLKELDRRCAELELEIEFVR-GGRARRELLTSSSVDH-----AGCDDNKSCLNDAAILQDQTQDALSRTINLVEASKEVGNSTINEHTILLLEHQQEQVKDISTDVMLIEDNLLRADKLIRNFTKRMMTDK 198
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10077.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE2.410e-8973.60t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA2.490e-4546.73Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA4.910e-3443.28Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
W7TW41_9STRA3.540e-1830.81Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
A0A7S4A3K9_9STRA3.180e-1630.96Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2V573_9STRA7.450e-1631.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3L437_9STRA8.240e-1430.96Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A448Z4W2_9STRA3.050e-1329.85t-SNARE coiled-coil homology domain-containing pro... [more]
A0A1E7F711_9STRA3.050e-1330.50t-SNARE coiled-coil homology domain-containing pro... [more]
F0YKX2_AURAN9.180e-1329.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10077contigS-dermatodea_contig10077:625..6362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.0
Seed ortholog evalue3e-12
Seed eggNOG ortholog35128.Thaps4535
EggNOG OGs29I5R@1,2RRCR@2759,2XCW0@2836
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-20_002310.1
Exons6
Model size844
Cds size618
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924138.2181814-CDS-S-dermatodea_contig10077:624..8011622924138.2181814-CDS-S-dermatodea_contig10077:624..801Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 625..801 -
1694079043.4237518-CDS-S-dermatodea_contig10077:624..8011694079043.4237518-CDS-S-dermatodea_contig10077:624..801Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 625..801 -
1622924138.227329-CDS-S-dermatodea_contig10077:1620..17611622924138.227329-CDS-S-dermatodea_contig10077:1620..1761Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 1621..1761 -
1694079043.4353988-CDS-S-dermatodea_contig10077:1620..17611694079043.4353988-CDS-S-dermatodea_contig10077:1620..1761Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 1621..1761 -
1622924138.2356787-CDS-S-dermatodea_contig10077:2337..24121622924138.2356787-CDS-S-dermatodea_contig10077:2337..2412Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 2338..2412 -
1694079043.4449513-CDS-S-dermatodea_contig10077:2337..24121694079043.4449513-CDS-S-dermatodea_contig10077:2337..2412Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 2338..2412 -
1622924138.2465825-CDS-S-dermatodea_contig10077:2914..30761622924138.2465825-CDS-S-dermatodea_contig10077:2914..3076Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 2915..3076 -
1694079043.4546018-CDS-S-dermatodea_contig10077:2914..30761694079043.4546018-CDS-S-dermatodea_contig10077:2914..3076Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 2915..3076 -
1622924138.2550013-CDS-S-dermatodea_contig10077:4786..48491622924138.2550013-CDS-S-dermatodea_contig10077:4786..4849Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 4787..4849 -
1694079043.4642735-CDS-S-dermatodea_contig10077:4786..48491694079043.4642735-CDS-S-dermatodea_contig10077:4786..4849Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10077 4787..4849 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924138.2630746-UTR-S-dermatodea_contig10077:4849..50231622924138.2630746-UTR-S-dermatodea_contig10077:4849..5023Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10077 4850..5023 -
1694079043.4742005-UTR-S-dermatodea_contig10077:4849..50231694079043.4742005-UTR-S-dermatodea_contig10077:4849..5023Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10077 4850..5023 -
1622924138.2717865-UTR-S-dermatodea_contig10077:6310..63621622924138.2717865-UTR-S-dermatodea_contig10077:6310..6362Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10077 6311..6362 -
1694079043.4846628-UTR-S-dermatodea_contig10077:6310..63621694079043.4846628-UTR-S-dermatodea_contig10077:6310..6362Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10077 6311..6362 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10077.57.1prot_S-dermatodea_contig10077.57.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10077 625..4849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10077.57.1

>prot_S-dermatodea_contig10077.57.1 ID=prot_S-dermatodea_contig10077.57.1|Name=mRNA_S-dermatodea_contig10077.57.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=206bp
MARSGNTGLGDMKYWDSSYGKTLDELEGFIVAAESGSGDARDDAVSSAGQ
SLKRLGGMKRSYNLEIKLMQDPASKGHYNLEKTKKDTRLAALQARLGAAQ
SGGQSKRDALFGGRRDVETGNGGSSQTAEAKLDEADHYQDKTEAAFKNMI
GVLQETEETADGTAIELTNQRQQLDRITEEAIEIDSLLTRADRLVKVFSK
RMMTDK
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mRNA from alignment at S-dermatodea_contig10077:625..6362-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10077.57.1 ID=mRNA_S-dermatodea_contig10077.57.1|Name=mRNA_S-dermatodea_contig10077.57.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5738bp|location=Sequence derived from alignment at S-dermatodea_contig10077:625..6362- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCACAGGGAGGGGGAGGGCTCCTGCTGTGAGGCCGTGACGACGAGCAAA
AGGTGGGAAACCAACAAGGCTGTCTTGGGAAGCGGGGGATGGGGGCGAGA
TACGATTCAGCTGTGTCGGGATAGATGGATGGTGTCGTTTCGCTAAGAAG
AAAAACAAATTGGACGACAACGAATACATAAAAAAGCAGCAGGTGAAAAT
CGAAAATCTCTCCTCTGCTCTACATGGTACTATCCAATCTTCTGTCTTGC
GAATGGATCAGCAGCGCAATGTGTTCCGAACATTGTACATGGCTCACATC
GATGCCCTCCAGTGCGACAGGCATTATTCCGCCACGAGCACTCCGGGCTG
TGTGTCTCCAGGTTTTCCTTATTTCCTTGCGGTGTGGCGGTGCTTGGATG
GGGCGGTGTATGTGTATAGTTGCCGGCAAAGTATCGTATCGCAGGTCGTT
GTCTCGCGCTTTTCGTTTGAGGTGAACGCTTCAGGCCCCAAAATCTGAAA
TCGTAAATTATGGCACTTCATACTTCATCGGCTGTCGGAAGCCCCCCGCG
CGCAGCCTTCCACTCTAGTTTTTCCTCATATCCATAATACCTACTGCTGT
CTGTATACTGTACTTGTATTAGAGTTGTATACCAGTACGCAGTATCAGCG
CAATAATAATAATGGAGCTCTATCATAGCTCTATAGTAGACCGGCAGCCA
AATCCCTACTACTTACGGTATGATATGCATACTCTTTTCTATACATTTGG
TAGAAAACGGTCTTCACAACGAAAACCATCCTCAGTGTGGCTCCACCCCA
AGCTGTACTTGGCACTAAAGCTATTAGAGCTCTACAACTGCTGTATACAT
GTCCCGTGTACTTGTACATCAGTTGAATACAGAGTAGTAGGTGACCTCAT
GATCCTTTTGACCTATCATATTATCTATATATAACATATCATACTTGCAA
CCTGAAACCGGCCTCTCTCATCATGCTTTCTACCTTGGAAAAAGCTACAT
ATTCAGCAAAAGCACGCATTCATAGTGGTACGTAACAAAAATATACAAAC
AAGTGCAATGCAATAACGTGTGACAGCATAACGCTCTTTTACGAGAGAAA
AACACACCGACAACAACGCACTTCAAACTATTAACACGTCTACTGCTGCT
GTACAAGGATACCGAGATCGAGCTACACCAGTACTGGTACCAGTTACATG
TCATACTTGTGGCATATACCATCTAATATAGATCAGCTCTACAGCTTCAA
CAGTTGAATATTACGCAAATACTCTGTACAAAGTAGTAGCACAGCGGTAT
GACGTATTCTAAATGACCCCGCTCTTGTTCCATAAACAGAGAGGAAGAGA
GGAAGAGAGTGCGAAAGGCACCCGGCGTCGAGCGGCGGAACCTCCATCTC
CTGGTTTACCGTCGTCCGCCGCTTGCCGAGAAACCCGAAGAGCGAAACAG
GGGCAGGGTGGGAGCTTCAGCAGTGCATAGATAAAGGGGATTTGATCGGA
CCGGTCAACAGCCATGGCCAGGTCCGGCAATACCGGGTTGGGCGATATGA
AGTACTGGGATTCGAGCTACGGGAAGGTGAGGGGGAAGGAAGGGAGCGCT
ATAATAGCTGCCCTCGGCGGCCGTGCACTGGAGCATGCGTATCAATGTCG
ATGATTTGTGTCTTGTATCCTTTGGGGTTGGATTGGACCAAGACCGGTAC
AGGTAGTCGACTTTCCTCTTTGAGGTTTGGATATCTGTCTACGTCTACAG
ATGAAGCTATGTATATAGACTCCATAGCTACAGTAGTAGAGTAGTATAGT
GAGCTATGATATGTAGCGGAGGAGGTGTGATGCAGGCATACTTGTGATAC
ATACCATACGTGTTGTATCAAAAGGCGGTTGAGTTTTTGTCTTGGAGATT
TTGTTTTGAGTTGTTAATTACACAAAACCACGTACCCTGTCCAGACAGCA
GTAAGTAGGTATACGCTTGCCAAATTCTTCTATTTGGTTGTTGCAGTTTC
ATGTTTCATGGTGCGCTGTTCGTGCGTGCTTGTCCAAGTTGCGAGGAGAT
GCACGTTTAAAAGACGCAACAAACCGGGGATAAGATAAGATAAGAGAGAT
GGGGTGATCCCTTGTGACCACAGCTGGACCTCGGAAAAGCAAGTCTATCG
TATATCATATAATATGTGGGCAAAAGAAAAAGAAAAAAGTGCGGCCTCTC
TGGCTGCTTCCGTTACAGCAGTAGGCTCTACTTGAGCTCTATGTACTCGG
TCTAGACGCCAATTCCATCTACTGCCGTGGTCTGCCAACGCTGCCCTGCT
GAATGACAATGGCTGGGGCTGTACCCAATCGGAGGCTCAGGTACGCTCTC
CAGCGATACCCATGTGCAGAGGGGCGGCGACCGCACCAACTGCAAACTCC
AGTTTTTTACGCACCGAGTTACGATGATATTTTGACCAGGCCTGCGCATA
CAGGCGAGCCGCTGGCATGCAAGGAGCTGCACCGCGCGCATCCACTAACC
TGCCCAAATATGATCGTTACTGGCAAAAACCGTCGATGGCCACGCCCTTT
TTCGCCTTCGCCGAATCCACCCCTCATCAATAAATACGTGGTGGCTTTTT
TGGTCGGAAACATTTTTTTTATCGTATGTATGACATTTTACATTTGCCAA
CATGTTACTACCCTTCATTGCTCGTTGTCTTGCATTCAGTAGTATTTGTA
CAAGCCCGGCATTGCCGCAGCCTGTCGCTTCAGCAGTAGAAGCAAATAGA
GCTCTAGAGCCTACGCGCACATACAGGTACTTGTTTTCATCAAAGAATTG
GCTCACCACCAACGCTCTCGCGTTCTCCGCGGCCGAAAGACGAGTCACAC
AAGCGCGCCTGCCACAGTTTGAACCCCCAAGATACCCGCCTACCGGACGA
ATGAACCCTGTAGTTAGTTCATCCTAGCTGATACGACCATTTTTATTTTT
TATTTTTATTTGATTGATTGATTTGCACACGTATAGCCGATCGGCATAAT
CCGACCCGACTTGTGGTCAGACACGCAAAGAGTCAAGGAGAAAAATAACT
AATCAGAATTCTGTGTGACCGGTTAACCACTGGGCCAGTGGCTGCCACCA
GGCGCATGGGCACGTCACAAACAGTACACGTATGGATGAAACCAATTCAA
GCACTTGTTTTGTACAAGGCCTCCCTCCCAGTACGCTATTAATCTATTAA
TAGGCCTCTCGTTTATCCCCAGAACATGATAACGGCTCGACGCGATCGAT
CTCACGCCGCCAACCCACCGATCGATCAATGGGCAGACCCTGGACGAACT
GGAGGGCTTCATCGTGGCCGCGGAGTCGGGGTCAGGAGACGCGCGGGATG
ACGCGGTTTCGAGCGCGGGGCAGTCGTTAAAACGCCTGGGCGGCATGAAG
CGGAGCTACAACCTAGAGATCAAGCTCATGCAGGATCCCGCCTCTAAGGT
ACGGATTGTATACGTGCAGCCAGCCTCACGCGGGAGTGAGATCCCGTAGC
CGATTGCCGCGAACGGAGATTCGAAATCGTGCCTCTGCATCGTACGCGCG
TGTGGTGCTACGCCTGGGGTTTGCGTCCGCACGCCAGGAGCTATGTATGG
TAGCTGAAGCGGGTGTCGGTGTACAACGGCTTCTTGCGCGTCGTGGTTGT
GATGACGTTGTAAACACGGCACCGTATACTCTATGCACTTTTACTCTCCT
ACTGGTGTTCCCGTGTTGGTTGATGTTACTTTCGGGCATATGTATACGGT
TGACGGTACGTGGCTTGCGGCGCGGTGATGCCGTACTGCGTTACGTATTT
CCCCTCTACACCCAGACGCTGCCTCTGCTGCTTCCCCCGTCTGTCGGCGA
TCTATTGGAAGCTCAATCGAGCTTTGCACAACCCTCCCCCCTCCCGGCGT
CTATCGGATTGCCTGCTGTTTCGGTCGAAATCGGTGTTGCACCGCACCAG
GGGCACTACAACCTAGAGAAGACGAAAAAGGACACCCGTCTGGCGGCCCT
GCAAGCAAGACTCGGCGCTGCCCAGGTCTTTGCGCGCGGGCTGTGCGGCC
ATCGCGCGATCAGTAGCGCGCGTTCGCGGGGAACCGCGCGGAAGCAGACG
CGGGCAGTCTTAGCATTAAGCGAAAGAGTTTTCGCTTGACCGGCTCTGCT
TGTTTTCAGACGAAAAAATATAGTTTATTTCTCGTGTGCGCTGTATACTT
CTCCGCGTATGTGCAAAACACCTGGGCGGGTTCGACTTGAGCCTTTTCCG
CCGCGTCTCCGTTTTTGTTTTTTGGGGTGGGCCCCGTGGAACAGTTGCGG
CCGCATAACTAGCGTCGCACATCTCCACGTGCGCGCGTCGGCGGGGTGAT
TTGCCTGACATCGTCGGCGCCTAGCCGCACACACCTTCAGCGGCGAAAGG
CACCGCCAAGGTCGTGTTCCCTCTTTACCATAAGAACGAAGAGACGCTCT
CGACGCCCGCTGAGGCGCTCGTCCATTACCTACACAGCCGCGGTGGCACC
GCCGCCGATACCGGTACCCAAACGAAGTGTTTTTTTTTAATGCAAGAACC
CCCCGCAACACTCCCTTCTCTATTCGCAAACGTTGCTCTGCCGCGGCACA
GTCGGGCGGACAGAGCAAGCGAGACGCGCTGTTCGGCGGTCGGAGGGATG
TCGAGACTGGGAACGGGGGCTCTTCTCAGACGGCGGAGGCCAAGCTGGAC
GAGGCGGATCACTACCAGGATAAGACGGAGGCTGCGTTCAAGGTACACAT
GGTGTTATCGGAGGGCCTTTATTTGGTTGGCGTCGTGTGCGCGCTTTATG
GTTTTGTAGTGTACGGGTTTTGCGTGCGCGTTTTGCGCGTAAGGTTCTTC
AATTTTATCGAATGCATGGCGATATATTTTTTAATAAACACAACACAGAA
AGGGTACAATCCATAAATCATCGCGGACGGGACCCGGGCGGACTCTGCTC
CACGCAAACCTGAGATGATTTTTCACCGGCCGCCCGAAAGAAGATATCCT
TAGTAGAACATGGGTCAGGCGACTCCCCAAGTGCAATGCTTGGGTGAGCA
GGACGTTCCTCGGCGAACCGTCAACCGTCACTAATTTTGGCGGCTTGAGT
GTTTTGGATTTTGTCGTGGGTTCGCGTATTTTGTTTCCTTCGAGAAACGG
GGAGTGGGGGGGCGGGGGGTCAGCCAGGGGTATGTCTTTTGGAGCAGCGT
ATGCTCCATTAAGCCGCTGTTTCTCCCAATTTTTGTCGCGGCGGACCCTC
TAGACGCTTGCTTTTGTGTTTTTCGGTCCGATCACGATCGAATGACTTTT
GCTTCCTGCAGCTAATTCGCCAGTCTCGGCGAGGGCGAGCAGCTTGCAGT
GGACGTGTCCGCTCTCAAACGCACTCGTTCGCCGCCGCGCAATCGGCAGC
CGCTCGGTTTCGAGGCGCCCTCACATCGCCCCCCAGTTCCCCAAGATCTG
CATGGCGTCCCCCGTCCTAAAACGTTTGCTCTTCCCCCCCGGGTACTGGC
CGCGCTCCATATATGAACGCCTACGTATCACCCCTATTTTGCGTGCGCGA
AACGAAAACAGAACATGATCGGAGTGCTCCAGGAGACGGAGGAGACGGCG
GACGGAACGGCGATAGAGCTAACCAACCAGAGACAGCAGCTAGACCGAAT
CACGGAGGAGGCAATCGAGATCGACTCTTTGTTGACGAGGGCGGACCGGC
TCGTAAAGGTCTTCTCGAAGCGAATGATGACCGATAAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10077:625..6362-

>mRNA_S-dermatodea_contig10077.57.1 ID=mRNA_S-dermatodea_contig10077.57.1|Name=mRNA_S-dermatodea_contig10077.57.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1236bp|location=Sequence derived from alignment at S-dermatodea_contig10077:625..6362- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCCAGGTCCGGCAATACCGGGTTGGGCGATATGAAGTACTGGGATTC
GAGCTACGGGAAGATGGCCAGGTCCGGCAATACCGGGTTGGGCGATATGA
AGTACTGGGATTCGAGCTACGGGAAGACCCTGGACGAACTGGAGGGCTTC
ATCGTGGCCGCGGAGTCGGGGTCAGGAGACGCGCGGGATGACGCGGTTTC
GAGCGCGGGGCAGTCGTTAAAACGCCTGGGCGGCATGAAGCGGAGCTACA
ACCTAGAGATCAAGCTCATGCAGGATCCCGCCTCTAAGACCCTGGACGAA
CTGGAGGGCTTCATCGTGGCCGCGGAGTCGGGGTCAGGAGACGCGCGGGA
TGACGCGGTTTCGAGCGCGGGGCAGTCGTTAAAACGCCTGGGCGGCATGA
AGCGGAGCTACAACCTAGAGATCAAGCTCATGCAGGATCCCGCCTCTAAG
GGGCACTACAACCTAGAGAAGACGAAAAAGGACACCCGTCTGGCGGCCCT
GCAAGCAAGACTCGGCGCTGCCCAGGGGCACTACAACCTAGAGAAGACGA
AAAAGGACACCCGTCTGGCGGCCCTGCAAGCAAGACTCGGCGCTGCCCAG
TCGGGCGGACAGAGCAAGCGAGACGCGCTGTTCGGCGGTCGGAGGGATGT
CGAGACTGGGAACGGGGGCTCTTCTCAGACGGCGGAGGCCAAGCTGGACG
AGGCGGATCACTACCAGGATAAGACGGAGGCTGCGTTCAAGTCGGGCGGA
CAGAGCAAGCGAGACGCGCTGTTCGGCGGTCGGAGGGATGTCGAGACTGG
GAACGGGGGCTCTTCTCAGACGGCGGAGGCCAAGCTGGACGAGGCGGATC
ACTACCAGGATAAGACGGAGGCTGCGTTCAAGAACATGATCGGAGTGCTC
CAGGAGACGGAGGAGACGGCGGACGGAACGGCGATAGAGCTAACCAACCA
GAGACAGCAGCTAGACCGAATCACGGAGGAGGCAATCGAGATCGACTCTT
TGTTGACGAGGGCGGACCGGCTCGTAAAGGTCTTCTCGAAGCGAATGATG
ACCGATAAGAACATGATCGGAGTGCTCCAGGAGACGGAGGAGACGGCGGA
CGGAACGGCGATAGAGCTAACCAACCAGAGACAGCAGCTAGACCGAATCA
CGGAGGAGGCAATCGAGATCGACTCTTTGTTGACGAGGGCGGACCGGCTC
GTAAAGGTCTTCTCGAAGCGAATGATGACCGATAAG
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