mRNA_S-dermatodea_contig1007.53.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 234 bits (596), Expect = 4.680e-71 Identity = 124/234 (52.99%), Postives = 163/234 (69.66%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
V++TSDGWTS +NDTYM T ++I+S ++L+ + V+CKK G TTG+ L E +KA R+GLT + A TDCE SMVK GR+L+++ TH+GC HRLES T F GPGV K +ALAR +VTRY+ SSQ +DRL Q ++ + VE KKV+QDV TRW ST + RLL LR PI +HE + + PLL DW VL++V P+ +PF L+QK E K VT SLV+P+I DLR
Sbjct: 50 VAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLR 282
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 234 bits (596), Expect = 2.030e-68 Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQ-QSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVT 474
V ITSDGWTSCANDTYMSLT + ITS W+L+T+SV C KSEGTTTG ALA G+KA +HGLTGK TA+ TDCE SMVKMGR+L + V T IGCCN+RLEST+ IVFNGP VKKVM LARGLVTRY TSSQ ADRL QFVKTYLGV+NK+VIQDVVT
Sbjct: 41 VCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 227 bits (579), Expect = 2.210e-65 Identity = 123/234 (52.56%), Postives = 160/234 (68.38%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
V++TSDGWT +NDTYMS T ++I+S ++L+ + ++CKK T G+ L E +KA R+GLTG+ AI TDCE SMVK GR+L+++ TH+GC HRLES T F GPGV K +ALARG+VTRY+ SSQ +DRL Q V + VE K V+QDV TRW ST V + RL+ LR PI +HE + PLL DW VL++V +L+PF AQK LE K VT LV P+I DL+
Sbjct: 6 VALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQ 238
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.180e-63 Identity = 121/235 (51.49%), Postives = 158/235 (67.23%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSGV-CTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
V+IT+DGWTS +N++YMSLTV++I W+L +S+ C K G+T G+ LA + + RHGLTG+ TA VTDCE SMVK GR+L+ G HIGC NHR+ESTT VFNG + +A AR +V RY SSQM+ RLA F+ L + V+QDV TRW S+ M+ RLL L + IK HE + + P+L+ DW VL ++ P+L PF AQK LEG KYVTGS+ VP I +LR
Sbjct: 77 VAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIG-ILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELR 309
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 210 bits (534), Expect = 3.960e-61 Identity = 120/235 (51.06%), Postives = 155/235 (65.96%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSG-VCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
V+IT+DGWTS N++YMSLTV++I W+L +S+ C K GTTTG+ LA + RH LTG+ A VTDCE SM+K GR+L+ G +HIGC NHR+ESTT VFNG + + LAR LV RY SSQMA RL Q L +E V+QDV TRW ST M+ RLL L + IK HE +++ PLL+ DW VL ++ P+L PF AQK LEG +YVTGS+ + + +LR
Sbjct: 41 VAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCG-ILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELR 273
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 184 bits (467), Expect = 6.880e-53 Identity = 105/225 (46.67%), Postives = 139/225 (61.78%), Query Frame = 1
Query: 28 SCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
S +NDTYM+ T ++I+S ++L+ + ++ KK G TTG+ L E +KA R+GLTG+ A TDCE MVK GR+L+++ +H+GC HR ES T F GPGV K +AL RG+VTRY+ SSQ ++RL Q + VE KKV+QDV TRW ST E + + PLL DW VL++V P+L PF AQK LE K VT SLV +I DLR
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCD-IVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLR 210
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A1X7UW18_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UW18_AMPQE) HSP 1 Score: 103 bits (257), Expect = 1.070e-21 Identity = 75/258 (29.07%), Postives = 119/258 (46.12%), Query Frame = 1
Query: 10 TSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLT--GKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPL--------------------------LTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDL 699
TSD WTSCAND Y+SLT FI S W+L++ + G TG + E +K G + A+V D +MV G IL++ C + C HRL+ + + + + A+ LVT + S+ +D L + + +G K+ QD TRW+ST M+ LLE R P+ E + LT+ +W +LE + VLEP ++A + +++ S+V+P +Y +
Sbjct: 187 TSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQLCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKK-KQLDMGKPVMKLQQDCPTRWNSTFYMIRSLLENRWPVTAVLSDETITKRQYQXXXXXXXXXXXXXXXXXXXRYLDLTSENWLLLEDLFKVLEPLEIATVVFSSESHISLSVVLPVVYSI 443
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU) HSP 1 Score: 102 bits (255), Expect = 1.470e-21 Identity = 73/241 (30.29%), Postives = 113/241 (46.89%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGL-TGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPL------LTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
+++T+D WTS A + Y+ +T FI+ WEL + + E TG +A ++ A R + A+V D ++V IL++ + C H L+ P + K + AR LV + S + +L K +G+ KK+IQDV TRW+ST M+ RLLE R P+ + P L WA+LE + L+ F+ A L G YVT S + P + L+
Sbjct: 82 IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQK-QMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQ 321
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: A0A671UN94_SPAAU (DUF659 domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN94_SPAAU) HSP 1 Score: 101 bits (251), Expect = 2.670e-21 Identity = 72/241 (29.88%), Postives = 112/241 (46.47%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGL-TGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIKKHEEAEKLEPL------LTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDLR 702
+++T+D WTS A + Y+ +T FI+ WEL + + E TG +A ++ R + A+V D ++V IL++ + C H L+ P + K + AR LV + S + +L K +G+ KK+IQDV TRW+ST M+ RLLE R P+ + P L WA+LE + L+ F+ A L G YVT S + P + L+
Sbjct: 82 IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHVIARFQVPASNIVAVVHDNGSNVVLAANILKEKHGWNSVRCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQK-QMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLIATLSDPTVTPRGKQHLDLKPDQWALLEKLAKALQAFESATVYLSGETYVTVSALPPLVRGLQ 321
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Match: UPI0005EE8021 (zinc finger BED domain-containing protein 1-like n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005EE8021) HSP 1 Score: 100 bits (250), Expect = 7.840e-21 Identity = 71/234 (30.34%), Postives = 121/234 (51.71%), Query Frame = 1
Query: 1 VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAEGMKAAGVRHGLTGKFTAIVTDCEHSMVKMGRILQQSGVCTHIGCCNHRLESTTFIVFNGPGVKKVMALARGLVTRYSTSSQMADRLAQFVKTYLGVENKKVIQDVVTRWSSTCVMMGRLLELREPIK-KHEEAEKLEPLLTAADWAVLEMVLPVLEPFKLAQKLLEGRKYVTGSLVVPFIYDL 699
+SIT++ WTS AND +++T FI ++ + ++ +K G T + +AE + + + K +V+D +M+K +L+ H C H + V VK ++ + +VT + S+ D+L K + E K+IQD TRW+S+ M+ R+L+LR+P+ E K LLTA D +LE ++ +L +LA K + G YVT SL++P I+ +
Sbjct: 174 ISITTNLWTSTANDGIITITAHFIYDD-DIKSAVLETRKVVGHHTAEHIAEELDEMLQKWNIREKIVTMVSDNASNMIKTATVLK----VRHSPCFAHTINLVALDVLETESVKPILKHVKEIVTYFRNSTLAMDKLRDMQKQF-HKEELKLIQDTPTRWNSSFYMIQRILKLRDPLLLAMSELRKSPRLLTAEDVLILEDLIIILSLLELATKDISGSLYVTMSLIIPLIHGI 401 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1007.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1007.53.1 >prot_S-dermatodea_contig1007.53.1 ID=prot_S-dermatodea_contig1007.53.1|Name=mRNA_S-dermatodea_contig1007.53.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=234bp VSITSDGWTSCANDTYMSLTVSFITSVWELITVSVKCKKSEGTTTGKALAback to top mRNA from alignment at S-dermatodea_contig1007:22018..22719- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1007.53.1 ID=mRNA_S-dermatodea_contig1007.53.1|Name=mRNA_S-dermatodea_contig1007.53.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=702bp|location=Sequence derived from alignment at S-dermatodea_contig1007:22018..22719- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1007:22018..22719- >mRNA_S-dermatodea_contig1007.53.1 ID=mRNA_S-dermatodea_contig1007.53.1|Name=mRNA_S-dermatodea_contig1007.53.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at S-dermatodea_contig1007:22018..22719- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |