mRNA_S-dermatodea_contig10068.50.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A6H5KLW2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLW2_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.990e-29 Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAGVLPESGEGRTKSKTEVQNNALQSRLVKIR 386
MGI+D+ +A HQRLK RIH FR+PLS+ G+IAMS+VYFSIPVVGGHY+MQWA +A NL +AGVLP+ GE T+SKT QN A++ +L +IR
Sbjct: 1 MGIMDDFSAGHQRLKERIHNFRIPLSRPGRIAMSIVYFSIPVVGGHYLMQWAQERAQVNLTDAGVLPKPGETPTRSKTHEQNAAIKKQLEEIR 93
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A8K1CHE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHE5_PYTOL) HSP 1 Score: 80.5 bits (197), Expect = 3.020e-15 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 3
Query: 105 MMGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGN--LRNAGVLPESGEGRTKSKTEVQNNALQSRLVKIRKE 392
++ L +L A H+RLK RIH+FR+PLSK GQ AMS+VYFS+PV+GG+++M+WA +A N L + +G TKS + QN L+ L +KE
Sbjct: 2 VLAYLRQLGAAHERLKKRIHSFRIPLSKNGQRAMSVVYFSVPVIGGYFVMKWAERRADRNFQLEEDKIRNATGASTTKS-VQRQNEQLRRMLEHAKKE 98
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A2D4BV99_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV99_PYTIN) HSP 1 Score: 78.2 bits (191), Expect = 2.100e-14 Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 3
Query: 105 MMGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNL 287
M+ L ++ A H+RLK R+HAFR+PLSK GQ AM +VYFSIPV+GG+++M+WA +A N
Sbjct: 1 MLSFLRDIGAAHERLKKRVHAFRIPLSKNGQRAMGVVYFSIPVIGGYFVMKWAERRAERNF 61
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A835YNY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.090e-13 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 3
Query: 123 ELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAGVLPESGEGRTKSKTEVQNNALQSRL 374
+L RH+ LK RIH FR+PLS RGQ+AM +VYF++P VGG IMQWA +A NL + V+ + T+ QN A Q L
Sbjct: 2 DLRGRHEALKKRIHNFRIPLSPRGQLAMQVVYFTVPFVGGMAIMQWARSKADKNLEHLQVVEAAA-------TQQQNKAFQQVL 78
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A0P1AWP4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWP4_PLAHL) HSP 1 Score: 71.6 bits (174), Expect = 4.470e-12 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAGVLPESGEGRTKSKTEVQNNALQSRLVKI 383
M L RH+ LK +IH+ R+PLSK GQ M +VYF+ P+VGG+YIM+WA G+A N + + G QN L+ +L ++
Sbjct: 1 MEFFRRLGERHEALKLKIHSTRIPLSKNGQRIMGVVYFTTPIVGGYYIMKWAEGRANANFQREEIEIRRAAGNNARNVAQQNQQLKKQLQQM 92
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A7R9U3Q2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Q2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.330e-11 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 3
Query: 114 ILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAG 299
+L +L+ R + LK RIH FRMPLS GQ M VYF IPV+GG+YIMQWA QA NL G
Sbjct: 6 LLRQLHERQENLKHRIHNFRMPLSPAGQRFMGFVYFCIPVIGGYYIMQWAQRQAEKNLGKHG 67
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: T0R506_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R506_SAPDV) HSP 1 Score: 70.1 bits (170), Expect = 1.520e-11 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAGVLPESGEGRTKSKTEVQNNALQSRLVKI 383
MG L +L H RLK RIH R+PLS G M +VYF+ P++GG+++MQWA ++ NLR+ P T++ T QN++L+ L I
Sbjct: 1 MGWLRDLGDAHTRLKKRIHGTRIPLSPAGIRFMKVVYFTTPIIGGYFVMQWAQARSVANLRDLHAPPP-----TQNPTSYQNDSLKGLLKDI 87
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A3M6VCE9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCE9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.060e-11 Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLR 290
M L L+ RHQ LK +IH+ R+PLS GQ M+LVYF+ P++GG+Y+M+WA +A N +
Sbjct: 1 MEFLRRLSKRHQELKQKIHSTRIPLSNNGQRVMALVYFTAPIIGGYYVMKWAERRADANFQ 61
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: G4ZFE1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZFE1_PHYSP) HSP 1 Score: 68.6 bits (166), Expect = 5.740e-11 Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLRNAGVLPESGEGRTKSKTEVQNNALQSRL 374
M +L RH+ LK +IH+ R+PLSK GQ M LVYF+ P+VGG+Y+M+WA +A N + + G QN L+ L
Sbjct: 1 MDFFRQLGERHEALKKKIHSTRIPLSKNGQRFMGLVYFTTPIVGGYYVMKWAERRADANFQREETVIRRAAGSNAKYVAQQNQQLKRML 89
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Match: A0A225WKI2_9STRA (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A225WKI2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.080e-10 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 3
Query: 108 MGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMQWANGQAPGNLR 290
M +L RH+ LK +IH+ R+PLSK GQ M LVYF+ P++GG+YIM+WA +A N +
Sbjct: 1 MEFFRQLGERHEALKKKIHSTRIPLSKNGQRVMGLVYFTTPIIGGYYIMKWAECRADANFQ 61 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10068.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10068.50.1 >prot_S-dermatodea_contig10068.50.1 ID=prot_S-dermatodea_contig10068.50.1|Name=mRNA_S-dermatodea_contig10068.50.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp MMGILDELNARHQRLKARIHAFRMPLSKRGQIAMSLVYFSIPVVGGHYIMback to top mRNA from alignment at S-dermatodea_contig10068:1640..4693+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10068.50.1 ID=mRNA_S-dermatodea_contig10068.50.1|Name=mRNA_S-dermatodea_contig10068.50.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3054bp|location=Sequence derived from alignment at S-dermatodea_contig10068:1640..4693+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10068:1640..4693+ >mRNA_S-dermatodea_contig10068.50.1 ID=mRNA_S-dermatodea_contig10068.50.1|Name=mRNA_S-dermatodea_contig10068.50.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at S-dermatodea_contig10068:1640..4693+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |