mRNA_S-dermatodea_contig1004.37.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig1004.37.1
Unique Name	mRNA_S-dermatodea_contig1004.37.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: D7FP82_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP82_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.680e-121
Identity = 253/574 (44.08%), Postives = 310/574 (54.01%), Query Frame = 1

Query:    1 SNTWVSRTPSGLPLCPICRKELGFCPHSSI---GTRERSKSISGA------GAASTLP--GTLPGAIAMNTGEDAPQASGSAEPRGNSEHDGKKRRGSGTQGAAPAKVQRRGRSTMGKGGSASAAAPNTSKARTKCASRRSPRFVVED---GPSGGRGAASGGDGAC-ADTSRRAAVPRHDHLLRFPGFSLNESGKECLGCYEVARITISFVCEDRRMKEVERQAAAVAEAQSAAACCSGNAEGAPATEEAPAALMGGLDLSAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCPGCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXG------------------RRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHWSNDPVLNHAYNAHQVAAAGFREGCIIS 1623
            +N+W++RTPSGLPLCP C KELGFCPHS     G R   K  +GA      G+   +P  G +P A+ +N   +A Q+  SA P    +H  K+R  +  QG    K ++R      KG  A +A       R +    RS R   E+    P      AS GD    +  +  AAV     LLRFPGF  N +G++C+ CYEVA I ++F CE RR +E E+  AA    Q ++   +G   GA A   A A+ +G   +  PH+MC+DCF V+VESRV+E  LVTSRDF+ YTVGCPMGCADS ++P+CFE+++G +FM+KYRRFAAIHLA H+R VWCPGCHCGVVPSAAA                           XX                   R+  E    T    R          QASLCM CR LH PGVSCADA A                  XXXXXXXXXXX                + S TKRCP CHVPIFKDGGCNHM C  C  EFCWLHLT WV GG CQRGHWS++P LN AYNA ++A    R+ C IS
Sbjct:    2 ANSWINRTPSGLPLCPTCNKELGFCPHSPTLREGARAGDKEETGAAHSAHTGSGEAVPDTGAVPLALRIN---EAGQSHESASPEERPKHGTKRRPSTALQG----KGKQRRVLVQSKGTPALSAPDEEDGVRIRRNPPRSTRTREEECKTRPKKRASLASSGDXXXXSGATNDAAVDEKTRLLRFPGFEANGTGQQCISCYEVAPIMVNFACEGRREQEAEKARAAAERQQGSSRESTG--AGAEAVNTAVASRLG---MDVPHVMCVDCFCVYVESRVSERMLVTSRDFDGYTVGCPMGCADSFIDPSCFEEVMGAEFMVKYRRFAAIHLASHLRVVWCPGCHCGVVPSAAAAAAAGARRSSVNPLPNLQQEQMGXXXXXXXXXXXXXXXXXXXXXXXAERQEEEGGDGTAARPRGSFCIGCPGCQASLCMLCRELHAPGVSCADAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEL---DDSPTKRCPGCHVPIFKDGGCNHMKCSRCHFEFCWLHLTEWVEGGECQRGHWSSNPALNRAYNAQRMARE--RQRCTIS 558

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A8J1XJ95_OWEFU (E3 ubiquitin-protein ligase parkin n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XJ95_OWEFU)

HSP 1 Score: 98.6 bits (244), Expect = 2.000e-18
Identity = 77/279 (27.60%), Postives = 102/279 (36.56%), Query Frame = 1

Query:  748 HIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCPGCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIG-LHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHWSNDPVLNHAYNAH 1581
            HIMCL+CFR +  S++ E       ++  YTV CP GC DS +  +    I+G +   +Y++F A       R V CP   CG                            +       GRR                       Q S    C       V CA+ R   +  E  +     G  A            +R  S+  +H T        TK CP C  P+ + GGC HMHC  C+HE+CWL L  W     CQ  HW  D  LN+  N H
Sbjct:  215 HIMCLECFREYCLSKLNERGFQAHPEY-GYTVACPAGCEDSLIQESHHFRIMGNEQYSRYQQFGAEEWVLKERGVLCPAPGCG----------------------------QGWITNDSGRR----------------------LQCSEPQGCGM-----VFCAECREAYHEGECDLASIQQGAIASINSADLSQTQQDRLQSLDTIHKT--------TKSCPKCSTPVERSGGCMHMHCIRCKHEWCWLCLIEW--NSECQSDHWFGDNPLNNPLNYH 427

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A3P9L2M2_ORYLA (E3 ubiquitin-protein ligase parkin n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9L2M2_ORYLA)

HSP 1 Score: 96.3 bits (238), Expect = 3.910e-18
Identity = 70/270 (25.93%), Postives = 100/270 (37.04%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCFR++ +SR+ E + V       Y++ C  GC DS +       +LG+D   +Y+++A       M  + CP  GC  G++PS                                             P R              C  CR  +  G        E  A +  +  E                 A RR      + R  +E   TK CPNC VP+ ++GGC HMHC +CQ ++CWL   PW     C   HW
Sbjct:  135 SERHVICLDCFRLYCQSRLNERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPSD--------------------------------------------PCRRVECERQLGCGFVFCRECREAYHQG--------ECRACQGFVVDEE----------------ASRRGRWEQASQRLIQEM--TKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVPW--NRECMGNHW 331

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A8C7XBS9_9TELE (RBR-type E3 ubiquitin transferase n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XBS9_9TELE)

HSP 1 Score: 94.0 bits (232), Expect = 9.130e-18
Identity = 69/271 (25.46%), Postives = 101/271 (37.27%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCR-ALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCFR++ +SR++E + V       Y++ C  GC DS +       +LG+D   +Y+++A       M  + CP  GC  G++PS                                             P R              C  CR A H        A    + ++  +  E                 A RR      + R  +E   TK CPNC VP+ ++GGC HMHC +CQ ++CWL    W     C   HW
Sbjct:   66 SERHVICLDCFRLYCQSRLSERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPSD--------------------------------------------PCRRVECERQLGCGFVFCRECREAFHQGECRACQAPPMGDVEQGFVVDEE----------------ASRRGRWEQASQRLIQEM--TKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVTW--NRECMGNHW 271

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A3B3IP36_ORYLA (E3 ubiquitin-protein ligase parkin n=7 Tax=Oryzias TaxID=8089 RepID=A0A3B3IP36_ORYLA)

HSP 1 Score: 96.3 bits (238), Expect = 1.490e-17
Identity = 70/271 (25.83%), Postives = 101/271 (37.27%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCR-ALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCFR++ +SR+ E + V       Y++ C  GC DS +       +LG+D   +Y+++A       M  + CP  GC  G++PS                                             P R              C  CR A H        A    + ++  +  E                 A RR      + R  +E   TK CPNC VP+ ++GGC HMHC +CQ ++CWL   PW     C   HW
Sbjct:  259 SERHVICLDCFRLYCQSRLNERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPSD--------------------------------------------PCRRVECERQLGCGFVFCRECREAYHQGECRACQAPPMGDVEQGFVVDEE----------------ASRRGRWEQASQRLIQEM--TKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVPW--NRECMGNHW 464

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A3B3ZNA0_9GOBI (E3 ubiquitin-protein ligase parkin n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZNA0_9GOBI)

HSP 1 Score: 92.4 bits (228), Expect = 2.120e-16
Identity = 71/269 (26.39%), Postives = 100/269 (37.17%), Query Frame = 1

Query:  742 APHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCPGCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGV--SCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            A H++CLDCFR + ++R+ E + V  ++   YT+ CP GC DS +       I+G++   +Y RF A      +  + CPG  CG                                GL    R VE                        C  CR  +  G   +   A  +A A E                       A  +A     +    +ES  TK CP C  P+ K+GGC+HMHC +CQ E+CW+   PW     C   HW
Sbjct:  231 ARHVICLDCFRGYAQTRLNERQFVYHQEL-GYTLPCPAGCEDSLIKELHHFRIMGQEQYDRYLRFGAEQCLLGLGGLLCPGAGCGA-------------------------------GLVAQGRRVE-------------CDVRAGCGLVFCRDCRQDYHQGACPTAEGAGTDAQAPE-----------------------ASLQARWDRDSLLFIKES--TKPCPQCSAPVQKNGGCSHMHCPLCQAEWCWVCALPW--SRDCMGNHW 427

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A8C7XCL3_9TELE (Parkin RBR E3 ubiquitin protein ligase n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XCL3_9TELE)

HSP 1 Score: 90.5 bits (223), Expect = 3.460e-16
Identity = 69/271 (25.46%), Postives = 104/271 (38.38%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCR-ALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCFR++ +SR++E + V       Y++ C  GC DS +       +LG+D   +Y+++A       M  + CP  GC  G++PS                                             P R              C  CR A H    S  +    +  +  ++++EA                  RR      + R  +E   TK CPNC VP+ ++GGC HMHC +CQ ++CWL    W     C   HW
Sbjct:  129 SERHVICLDCFRLYCQSRLSERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPSD--------------------------------------------PCRRVECERQLGCGFVFCRECREAFHQGEPSSVN---HSPIQGFVVDEEA-----------------SRRGRWEQASQRLIQEM--TKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVTW--NRECMGNHW 330

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: A0A834CST1_ORYME (E3 ubiquitin-protein ligase parkin n=2 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834CST1_ORYME)

HSP 1 Score: 89.0 bits (219), Expect = 3.520e-15
Identity = 67/271 (24.72%), Postives = 101/271 (37.27%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCR-ALHDPGVSCADARAEANAKEDMINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCFR++ +SR+ E + V       Y++ C  GC DS +        LG++   +Y+++A       M  + CP  GC  G++PS                                              SR              C  CR A H        A    + +++ +  E                 A RR      +    +E+  TK CP+C VP+ ++GGC HMHC +CQ ++CWL   PW     C   HW
Sbjct:  253 SERHVICLDCFRLYCQSRLNERQFVHHAAV-GYSLPCAAGCEDSLIKELHHFRALGDEQYTRYQQYATEECLLKMGGLLCPAPGCGAGLLPSDL--------------------------------------------SRRVECDPQLGCGFVFCRECREAFHQGECRALQALPVGDVEQEFVVDEE----------------ASRRGRWEQASRLLIQET--TKPCPSCSVPVERNGGCMHMHCALCQADWCWLCGVPW--NRECMGNHW 458

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BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: UPI001487470E (E3 ubiquitin-protein ligase parkin-like isoform X2 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI001487470E)

HSP 1 Score: 85.1 bits (209), Expect = 5.270e-15
Identity = 72/273 (26.37%), Postives = 102/273 (37.36%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGVSCADARAEANAKED---MINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCF  + ++R++E + V S     Y++ C  GC DS +       ILGED   +Y+++ A         + CP  GC  G++P                                       P  T+                   C  CR  +  G +C   RA   A+     M+  EA   G               RAS+ L          STKRCP C VP+ +DGGC HM C +C+ ++CWL    W     C   HW
Sbjct:   31 SERHVICLDCFHRYCQTRLSERQFV-SHPVIGYSLPCAAGCIDSLIKELHHFRILGEDQYGRYQQYGAEECLLMNGGLMCPSPGCGAGLIP---------------------------------------PDGTSRVQCERQLGCGFV-----FCKYCREAYHEG-ACLTERAPPTAEASQGFMVEDEASLRGRWD------------RASLLLL-------QESTKRCPQCSVPVERDGGCMHMQCPLCRADWCWLCGVSW--NRDCMGNHW 236

[Close]

BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Match: UPI0014867F63 (E3 ubiquitin-protein ligase parkin-like isoform X1 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI0014867F63)

HSP 1 Score: 85.1 bits (209), Expect = 2.390e-14
Identity = 72/273 (26.37%), Postives = 102/273 (37.36%), Query Frame = 1

Query:  739 SAPHIMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDILGEDFMLKYRRFAAIHLAFHMRTVWCP--GCHCGVVPSAAAXXXXXXXXXXXXXXXXXXXXXRSMWGLXXGRRGVEPAATTEPPSRXXXXXXXXXXQASLCMSCRALHDPGVSCADARAEANAKED---MINQEAHGGGAXXXXXXXXXXXAERRASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHLTPWVIGGPCQRGHW 1542
            S  H++CLDCF  + ++R++E + V S     Y++ C  GC DS +       ILGED   +Y+++ A         + CP  GC  G++P                                       P  T+                   C  CR  +  G +C   RA   A+     M+  EA   G               RAS+ L          STKRCP C VP+ +DGGC HM C +C+ ++CWL    W     C   HW
Sbjct:  131 SERHVICLDCFHRYCQTRLSERQFV-SHPVIGYSLPCAAGCIDSLIKELHHFRILGEDQYGRYQQYGAEECLLMNGGLMCPSPGCGAGLIP---------------------------------------PDGTSRVQCERQLGCGFV-----FCKYCREAYHEG-ACLTERAPPTAEASQGFMVEDEASLRGRWD------------RASLLLL-------QESTKRCPQCSVPVERDGGCMHMQCPLCRADWCWLCGVSW--NRDCMGNHW 336

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig1004.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FP82_ECTSI	1.680e-121	44.08	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A8J1XJ95_OWEFU	2.000e-18	27.60	E3 ubiquitin-protein ligase parkin n=1 Tax=Owenia ...	[more]
A0A3P9L2M2_ORYLA	3.910e-18	25.93	E3 ubiquitin-protein ligase parkin n=2 Tax=Oryzias...	[more]
A0A8C7XBS9_9TELE	9.130e-18	25.46	RBR-type E3 ubiquitin transferase n=1 Tax=Oryzias ...	[more]
A0A3B3IP36_ORYLA	1.490e-17	25.83	E3 ubiquitin-protein ligase parkin n=7 Tax=Oryzias...	[more]
A0A3B3ZNA0_9GOBI	2.120e-16	26.39	E3 ubiquitin-protein ligase parkin n=2 Tax=Perioph...	[more]
A0A8C7XCL3_9TELE	3.460e-16	25.46	Parkin RBR E3 ubiquitin protein ligase n=1 Tax=Ory...	[more]
A0A834CST1_ORYME	3.520e-15	24.72	E3 ubiquitin-protein ligase parkin n=2 Tax=Oryzias...	[more]
UPI001487470E	5.270e-15	26.37	E3 ubiquitin-protein ligase parkin-like isoform X2...	[more]
UPI0014867F63	2.390e-14	26.37	E3 ubiquitin-protein ligase parkin-like isoform X1...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig1004	contig	S-dermatodea_contig1004:16176..21847 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	386.0
Seed ortholog evalue	3e-104
Seed eggNOG ortholog	2880.D7FP82
Preferred name	PARK2
KEGG ko	ko:K04556
KEGG Pathway	ko04120,ko04137,ko04141,ko05012,map04120,map04137,map04141,map05012
GOs	GO:0000003,GO:0000122,GO:0000139,GO:0000151,GO:0000209,GO:0000266,GO:0000422,GO:0000423,GO:0000976,GO:0001067,GO:0001101,GO:0001504,GO:0001505,GO:0001558,GO:0001664,GO:0001932,GO:0001933,GO:0001959,GO:0001961,GO:0001963,GO:0001964,GO:0002020,GO:0002791,GO:0002792,GO:0002793,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003779,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0006109,GO:0006140,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006584,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006839,GO:0006914,GO:0006915,GO:0006950,GO:0006979,GO:0006986,GO:0006996,GO:0007005,GO:0007034,GO:0007041,GO:0007154,GO:0007267,GO:0007268,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007417,GO:0007420,GO:0007568,GO:0007584,GO:0007610,GO:0007611,GO:0007612,GO:0007626,GO:0008013,GO:0008021,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008340,GO:0008344,GO:0008345,GO:0008637,GO:0009056,GO:0009057,GO:0009605,GO:0009636,GO:0009712,GO:0009719,GO:0009725,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010243,GO:0010259,GO:0010468,GO:0010498,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010635,GO:0010636,GO:0010637,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010677,GO:0010720,GO:0010803,GO:0010817,GO:0010821,GO:0010822,GO:0010823,GO:0010906,GO:0010918,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0010992,GO:0010994,GO:0012501,GO:0012505,GO:0012506,GO:0014059,GO:0014069,GO:0014070,GO:0014823,GO:0014850,GO:0015631,GO:0015696,GO:0015844,GO:0015850,GO:0015872,GO:0015893,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016239,GO:0016241,GO:0016567,GO:0016579,GO:0016604,GO:0016607,GO:0016740,GO:0017124,GO:0017144,GO:0017157,GO:0018958,GO:0019048,GO:0019054,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019941,GO:0019953,GO:0022008,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030100,GO:0030111,GO:0030133,GO:0030154,GO:0030162,GO:0030163,GO:0030165,GO:0030178,GO:0030307,GO:0030334,GO:0030336,GO:0030382,GO:0030424,GO:0030534,GO:0030537,GO:0030544,GO:0030658,GO:0030659,GO:0030672,GO:0030808,GO:0030810,GO:0031072,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031624,GO:0031625,GO:0031644,GO:0031645,GO:0031647,GO:0031648,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031960,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032024,GO:0032092,GO:0032182,GO:0032231,GO:0032232,GO:0032268,GO:0032269,GO:0032270,GO:0032279,GO:0032368,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033131,GO:0033132,GO:0033157,GO:0033238,GO:0033267,GO:0033365,GO:0033554,GO:0033673,GO:0033993,GO:0034613,GO:0034620,GO:0034622,GO:0034976,GO:0035249,GO:0035519,GO:0035690,GO:0035774,GO:0035821,GO:0035966,GO:0035967,GO:0036211,GO:0036477,GO:0036503,GO:0040008,GO:0040012,GO:0040013,GO:0042053,GO:0042069,GO:0042175,GO:0042176,GO:0042221,GO:0042325,GO:0042326,GO:0042391,GO:0042415,GO:0042417,GO:0042493,GO:0042592,GO:0042802,GO:0042826,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043086,GO:0043122,GO:0043123,GO:0043130,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043195,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043274,GO:0043388,GO:0043393,GO:0043408,GO:0043409,GO:0043412,GO:0043523,GO:0043524,GO:0043549,GO:0043565,GO:0043632,GO:0043653,GO:0043679,GO:0043900,GO:0043901,GO:0043903,GO:0043933,GO:0044003,GO:0044057,GO:0044068,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044306,GO:0044314,GO:0044389,GO:0044390,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044788,GO:0044793,GO:0044827,GO:0044828,GO:0044877,GO:0045069,GO:0045071,GO:0045121,GO:0045202,GO:0045472,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045806,GO:0045838,GO:0045862,GO:0045892,GO:0045893,GO:0045912,GO:0045920,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0045981,GO:0046328,GO:0046329,GO:0046676,GO:0046677,GO:0046872,GO:0046883,GO:0046887,GO:0046888,GO:0046914,GO:0046928,GO:0046929,GO:0048070,GO:0048073,GO:0048075,GO:0048076,GO:0048078,GO:0048087,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050433,GO:0050708,GO:0050709,GO:0050714,GO:0050764,GO:0050765,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050792,GO:0050793,GO:0050794,GO:0050796,GO:0050801,GO:0050804,GO:0050805,GO:0050821,GO:0050877,GO:0050890,GO:0050896,GO:0050905,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051087,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051258,GO:0051270,GO:0051271,GO:0051338,GO:0051341,GO:0051348,GO:0051354,GO:0051384,GO:0051385,GO:0051412,GO:0051493,GO:0051494,GO:0051580,GO:0051582,GO:0051583,GO:0051588,GO:0051589,GO:0051590,GO:0051603,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051701,GO:0051702,GO:0051704,GO:0051716,GO:0051817,GO:0051851,GO:0051865,GO:0051881,GO:0051934,GO:0051937,GO:0051952,GO:0051960,GO:0051962,GO:0051966,GO:0051967,GO:0055065,GO:0055069,GO:0055076,GO:0055080,GO:0060099,GO:0060101,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060359,GO:0060548,GO:0060627,GO:0060759,GO:0060760,GO:0060828,GO:0061136,GO:0061178,GO:0061630,GO:0061659,GO:0061726,GO:0061734,GO:0061912,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0070201,GO:0070302,GO:0070303,GO:0070382,GO:0070534,GO:0070585,GO:0070646,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0070936,GO:0070979,GO:0071229,GO:0071230,GO:0071241,GO:0071242,GO:0071248,GO:0071287,GO:0071310,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0072507,GO:0080090,GO:0080134,GO:0080135,GO:0085020,GO:0090087,GO:0090090,GO:0090140,GO:0090141,GO:0090199,GO:0090201,GO:0090258,GO:0090276,GO:0090277,GO:0090278,GO:0090394,GO:0090493,GO:0090494,GO:0097159,GO:0097164,GO:0097237,GO:0097305,GO:0097327,GO:0097413,GO:0097458,GO:0097602,GO:0097708,GO:0098588,GO:0098589,GO:0098657,GO:0098771,GO:0098779,GO:0098780,GO:0098791,GO:0098793,GO:0098794,GO:0098805,GO:0098810,GO:0098815,GO:0098827,GO:0098857,GO:0098916,GO:0098984,GO:0099074,GO:0099075,GO:0099177,GO:0099501,GO:0099503,GO:0099536,GO:0099537,GO:0099572,GO:0110053,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140110,GO:0150003,GO:0150034,GO:1900371,GO:1900373,GO:1900407,GO:1900408,GO:1900542,GO:1900544,GO:1901074,GO:1901075,GO:1901214,GO:1901215,GO:1901360,GO:1901363,GO:1901524,GO:1901526,GO:1901564,GO:1901565,GO:1901575,GO:1901615,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901797,GO:1901800,GO:1902065,GO:1902175,GO:1902176,GO:1902235,GO:1902236,GO:1902253,GO:1902254,GO:1902283,GO:1902494,GO:1902528,GO:1902530,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902803,GO:1902882,GO:1902883,GO:1902903,GO:1902904,GO:1902914,GO:1902916,GO:1903008,GO:1903050,GO:1903052,GO:1903146,GO:1903201,GO:1903202,GO:1903203,GO:1903204,GO:1903214,GO:1903265,GO:1903299,GO:1903300,GO:1903320,GO:1903322,GO:1903350,GO:1903351,GO:1903362,GO:1903364,GO:1903376,GO:1903377,GO:1903381,GO:1903382,GO:1903426,GO:1903427,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903531,GO:1903532,GO:1903533,GO:1903541,GO:1903542,GO:1903573,GO:1903578,GO:1903580,GO:1903599,GO:1903649,GO:1903651,GO:1903747,GO:1903827,GO:1903829,GO:1903859,GO:1903861,GO:1903900,GO:1903901,GO:1904048,GO:1904049,GO:1904643,GO:1904844,GO:1904845,GO:1904880,GO:1904881,GO:1904923,GO:1904925,GO:1904950,GO:1904951,GO:1904978,GO:1904979,GO:1905153,GO:1905154,GO:1905232,GO:1905279,GO:1905281,GO:1905365,GO:1905366,GO:1905475,GO:1905477,GO:1905897,GO:1905952,GO:1990234,GO:1990381,GO:1990444,GO:1990452,GO:1990837,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000377,GO:2000378,GO:2000425,GO:2000426,GO:2001023,GO:2001141,GO:2001169,GO:2001171,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.	regulation of intralumenal vesicle formation
EggNOG OGs	KOG0006@1,KOG0006@2759
EC	2.3.2.31
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03029,ko04121,ko04131
Hectar predicted targeting category	other localisation
Ec32 ortholog description	C6HC-type zinc finger and E3 ubiquitin ligase RBR domain protein
Ec32 ortholog	Ec-08_000450.1
Exons	6
Model size	1626
Cds size	1626
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig1004.37.1	prot_S-dermatodea_contig1004.37.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig1004 16176..21847 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924136.8592932-CDS-S-dermatodea_contig1004:16175..16360	1622924136.8592932-CDS-S-dermatodea_contig1004:16175..16360	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 16176..16360 -
1694079042.297678-CDS-S-dermatodea_contig1004:16175..16360	1694079042.297678-CDS-S-dermatodea_contig1004:16175..16360	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 16176..16360 -
1622924136.8675823-CDS-S-dermatodea_contig1004:17076..17623	1622924136.8675823-CDS-S-dermatodea_contig1004:17076..17623	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 17077..17623 -
1694079042.3507185-CDS-S-dermatodea_contig1004:17076..17623	1694079042.3507185-CDS-S-dermatodea_contig1004:17076..17623	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 17077..17623 -
1622924136.875489-CDS-S-dermatodea_contig1004:18237..18412	1622924136.875489-CDS-S-dermatodea_contig1004:18237..18412	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 18238..18412 -
1694079042.3623798-CDS-S-dermatodea_contig1004:18237..18412	1694079042.3623798-CDS-S-dermatodea_contig1004:18237..18412	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 18238..18412 -
1622924136.8859787-CDS-S-dermatodea_contig1004:19401..19523	1622924136.8859787-CDS-S-dermatodea_contig1004:19401..19523	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 19402..19523 -
1694079042.3755429-CDS-S-dermatodea_contig1004:19401..19523	1694079042.3755429-CDS-S-dermatodea_contig1004:19401..19523	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 19402..19523 -
1622924136.894801-CDS-S-dermatodea_contig1004:20378..20654	1622924136.894801-CDS-S-dermatodea_contig1004:20378..20654	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 20379..20654 -
1694079042.3852165-CDS-S-dermatodea_contig1004:20378..20654	1694079042.3852165-CDS-S-dermatodea_contig1004:20378..20654	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 20379..20654 -
1622924136.9037952-CDS-S-dermatodea_contig1004:21526..21847	1622924136.9037952-CDS-S-dermatodea_contig1004:21526..21847	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 21527..21847 -
1694079042.4134495-CDS-S-dermatodea_contig1004:21526..21847	1694079042.4134495-CDS-S-dermatodea_contig1004:21526..21847	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1004 21527..21847 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig1004:16176..21847-
coding sequence from alignment at S-dermatodea_contig1004:16176..21847-

protein sequence of mRNA_S-dermatodea_contig1004.37.1

>prot_S-dermatodea_contig1004.37.1 ID=prot_S-dermatodea_contig1004.37.1|Name=mRNA_S-dermatodea_contig1004.37.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=542bp
SNTWVSRTPSGLPLCPICRKELGFCPHSSIGTRERSKSISGAGAASTLPG
TLPGAIAMNTGEDAPQASGSAEPRGNSEHDGKKRRGSGTQGAAPAKVQRR
GRSTMGKGGSASAAAPNTSKARTKCASRRSPRFVVEDGPSGGRGAASGGD
GACADTSRRAAVPRHDHLLRFPGFSLNESGKECLGCYEVARITISFVCED
RRMKEVERQAAAVAEAQSAAACCSGNAEGAPATEEAPAALMGGLDLSAPH
IMCLDCFRVFVESRVTEGKLVTSRDFESYTVGCPMGCADSCVNPACFEDI
LGEDFMLKYRRFAAIHLAFHMRTVWCPGCHCGVVPSAAAAAAAKAARHNP
VPSIPPPPPTRSMWGLWGGRRGVEPAATTEPPSRPSNCIGCPGCQASLCM
SCRALHDPGVSCADARAEANAKEDMINQEAHGGGAGGEGGGGRAGGAERR
ASIGLHTTRHFEESSSTKRCPNCHVPIFKDGGCNHMHCGMCQHEFCWLHL
TPWVIGGPCQRGHWSNDPVLNHAYNAHQVAAAGFREGCIIS*

mRNA from alignment at S-dermatodea_contig1004:16176..21847-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig1004.37.1 ID=mRNA_S-dermatodea_contig1004.37.1|Name=mRNA_S-dermatodea_contig1004.37.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5672bp|location=Sequence derived from alignment at S-dermatodea_contig1004:16176..21847- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCAAACACGTGGGTTAGCCGCACACCATCGGGTCTCCCTCTTTGCCCCAT
CTGCCGCAAGGAGCTTGGCTTCTGCCCTCACTCGTCTATCGGCACCAGGG
AGAGGTCCAAGTCTATTTCCGGCGCTGGAGCCGCGTCTACGCTTCCTGGC
ACGTTGCCTGGCGCTATCGCCATGAACACGGGTGAGGATGCTCCCCAAGC
AAGCGGGAGCGCCGAGCCAAGAGGCAATTCGGAGCATGATGGAAAGAAGA
GGCGCGGCTCAGGTACACAGGGGGCGGCTCCGGCTAAGGTGCAGCGGCGT
GGGAGGTCAACGATGGGGAAGGTGCGTGTGTAAGGGGCACCACGTAGAAT
AGGGACAACTTTGGGTATACACTTATTTGTGCCCTTTTTTTTTTAAGCAG
CACGAGATGCTTGGTCAGGTTTGGCCGAACTTGGCCCAACAATATGTGTG
TCGTACTTACACAAAGTATTACAGGTAGACTAGTATGATAGGTGGGTTGG
AGGATCGGAGGGCTTGGGCCCGATACACAAACAGTGTGTCAGACTATTGG
CACGCTTGGAGACTCCTTGGCCGGAGCTTGCACGACGGCGCCACGGTGGA
AAACTCCCGACGTAAAACAATATTTGCTCGCGACACACGTACACGTACTA
TTTACGTGGTAAACAGACATATGCTGTACCGTAGTCTACATGGTACAATA
AGTGTTAATAATACTGTACAAGTACTACAGACATTTGTAGTAAATTACTC
GAGAGGTCCAACATCGTCCCGCGCATGTACTTCCCGTGCATGTACTTGCG
GGGCATGTGGGCTAATAATTAAGAAGGCACCGCCGCGTTTGACGGCGGAA
TAGGCCAGAATTGTATGGCTGCTCGCGTGAAGTGAGGACGATAAGCCTTA
ATGTCGGAACCATTACGCCGAATGTGACCCGCCTCCTCCGCCACTTCGGT
GGAACAATGCACGGCGAAATCCACGCTATTCCATCATGCGCATCGAGCAC
GCAACACTTCCTCTGACGTTGTGAGTTGCCTCCCCCTGCCAGCACACAAA
AAAACGGGGTTGCCTTTTCCCAAATATTGTGTAACCTCTACCTCCATTTT
GAACGGGTCCACCAATCAGAATGGCACAACCGGCTCAATCCGAAAATCCG
ACATGCACGACACCTCGCCGTACCCAAAAAATGCCTACCGTAGGGCGGAT
CGGCATCAGCTGCGGCACCCAACACCTCAAAGGCCAGGACTAAATGTGCC
TCCCGTCGTAGCCCAAGATTCGTGGTCGAAGATGGGCCATCCGGTGGGAG
AGGCGCGGCAAGCGGCGGCGACGGTGCTTGCGCCGATACTAGCAGACGTG
CTGCTGTTCCCAGACATGATCACTTGTTGCGTTTCCCGGGGTTTTCTCTC
AACGAAAGCGGGAAGGAGTGCCTCGGATGCTACGAAGTCGCGAGGATCAC
GATAAGCTTTGTCTGCGAGGTGGGGGTCAAGACGGTTCTGGAAAATTGTG
GCTGTTGATTGATTGAGTGTTTGATTGGTAAGTTGTTGAGTAATTGATTG
GTTGCTTCATTGATTGATTGATTGAATTATTGGTTTATTGATTAGTTGGT
TTTGATTTGATTATCAAACCGATCGGCCCGCCTCTGGTTGCCGATCCCGC
TCGTGGTGACATGATAAATCGAAAAATCGAAATAGCCTACAAGTACGGAA
TTACCTATATACTTCGAAGTATAGTACATGTATAGAAGAATTAACAAAAA
CGCTCGAAATCAGTGGGGACATGCGTCGGACTTTGGGTCTACTAACCCGA
TGAGTGTGTAAACTGTCGTGCTCTGTTTCTATATAAAAAATAAAAAATAA
AAAAAAACAGCTACGGCTCATCACAGCGGGTCAGAGTCCACAACCATGCC
CGAGCTACGAAGAAAGCTTAGCGACTCGCATACCCGCCGTCCGTGGAGAA
ATTAAATACCTGTGTACCTGCATATTTTATCAGCGCTAGCTCTCCCGCCC
TGGAAATGAAAAAAATACACATATGATACATACTTGTAAAGTACTCAGGT
TGTGGTCAATTCATGATTCTCCGCCGTGCTTATTTGGGGTCAACGTCAAA
CGTTCACGGTATTACTCAGCTATTTCGCCCGTGGGGGTGCTTTCAGAGAC
GCCCGCAAAATACGTCCATGTTAATTCCCAGCGACGCTGTCAACTCGAGC
ATTTTTGCCATCCAAAATAACCCATTCCCTCATGCCTGGTAAGCCATACA
TACCTACCTGGTGCGCCTACACTATCGTACTGTAATCGTTTTCGTGCTAA
AATTGTAAATTGGCCGCTTTGCAGGACCGTCGGATGAAGGAGGTGGAACG
ACAAGCGGCAGCTGTTGCGGAAGCCCAGTCCGCCGCCGCATGTTGTTCGG
GAAACGCCGAGGGTGCCCCCGCCACCGAGGAAGCCCCCGCCGCCTTGTAA
GCAAAGCGTGGAAGTATCGCGTATTATATTATAGAGAGAACAAGTCGACA
GGCACATGTCCGAGTACTAGGCATCCGTGAAATACGTTGCCCCGCCACCT
CTGCACTCTGTGAAGCCTATCCTCTTTTGCGGTGGTAGGAGTAGCCCCAG
TCCGAGCGTAGTGTCTCTTGTACCAGTATATTTTCTGAACTGTCGCTGTG
TAAATTTTCATGTTTTTTTATTTGTGTATTTAAAATCTTGACTTTTTTCA
TCTGATGAGCACGGATATCATTGGAGGCCAATCAATTTCATTCAGTGAAA
ACATCGTAAAATCTCTCCCGAGCCGGACAGGGTATAAGGTCCTAACCTTT
ACATCGTTTGTCGACTTCTTGGTTAGAACAGTTTTTCCTTCTACGTGCAA
AACTATAGCAAAGGAGCCGTCGCAAACGAACCAGGGTCTGAAGGCATGTA
TTTCGAAATTTGGGTACCGCGGCGGCGTGTACAAGGACGTCGGCCCCGTT
GTGACAGGCAACTTGACACCATGATAGAGGAAGGGTCTGGGCTCACCTTA
CACTCTTCCCCCTTCCTTGATTGATTGAGTTTATTGATTTGCACACGTAT
AGCAGATCGGCTTAATCCGACCCGACTTGTGGTCAGACACGCAAAGAGTC
AAGAAAAATAACTAATCAGAACTCTACTTCTACGATACACCGTACCGTCC
CATGACTTACTATGGTCCTTTCTGTAACAAAATGCTGCGGCAGCACTACG
TCTTGATCGTAAACGTTGGCGGGCATGTACCTTACAGGCGCCAAGATGGT
CCCTCCAGATTTTTCACAAACAGAGTCAAGGAAAAGAGATCATTCCAAGA
AATAAAGTATCGTGAAAATCATGTCCCCTCTGGGCCTTGGATCTCTCCAT
GCCATTCAATCCACAGATTTCAACGCCCCACTTACTCCTCGCCCGCCCAA
TGTCACATCTCCGTCATTTTACGTGATTATCGCAGGATGGGCGGCCTTGA
CTTGTCCGCTCCGCACATCATGTGCCTGGATTGCTTCCGTGTGTTCGTGG
AGAGCCGCGTGACCGAAGGAAAGCTGGTGACCTCGCGCGACTTCGAGAGC
TACACGGTCGGCTGTCCCATGGGTTGCGCCGACAGCTGTGTCAACCCTGC
ATGCTTCGAGGTGTGCGCATTGTTATTATTGCTCGCGCTGCACGTTTTTT
TTGTGTATGTTTCTGTTCGTAAACAAAAGTTAAGGGCAGGGCAAAGACAG
CAACCAATACGTGTGGGGGTTAAGCATGATGAAGTATTTATTTTAGTTTG
TCTAAAAAATGTTTAGCTATAAAAAAATAAAATAAAATGACGTTGTGGAC
GAATTCAAACCAAGCATACCGGTGTCAAAAAGTCGTCTTTCTCGTTCACG
CGGACGCATATTTTCGCGAATAACTTCCAAACTACATCGGAGCACATCTT
GAAAATTTTACCTGAAGAAAAAAAGACATAGCGTTAAGAAGATAGCCGGA
GAATAAACAACCCCCCCCCAGAAGTGGCCTGAGAAGGTGAGATTTAACGT
AGACAGGATAGCCAAGACATTTTTCGCCACGTTTGGCAGAGTAGGAAGGG
ACGATTGGCCATCGGCGATTGATCGATCCGGTAGGAACAACACTCCATCC
TCTCGAGGACGGGGGGTCGATGGTCTAACAGCCAAGGAACGCAAACCATG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCGCCCCCGCCCCCGCCC
CCGCCCCCGCCCCCGCCCCAACAGGATATCCTAGGAGAGGACTTCATGCT
GAAGTACCGCCGGTTCGCGGCCATCCACCTCGCGTTCCACATGCGTACCG
TCTGGTGCCCGGGGTGCCACTGCGGCGTCGTCCCGTCCGCTGCCGCTGCA
GCCGCGGCAAAAGCGGCCCGGCACAACCCAGTTCCCTCGATCCCACCCCC
TCCACCCACCCGATCCATGTGGGGCTTGTGGGGGGGCAGAAGAGGGGTGG
AGCCGGCCGCGACCACGGAGCCACCGAGCCGACCCAGCAACTGCATTGGG
TGCCCAGGGTGCCAGGCGTCCCTGTGCATGTCGTGCAGGGCTCTGCATGA
CCCTGGGGTATCTTGCGCCGACGCCCGTGCCGAAGCTAATGCCAAGGAGG
ACATGATCAACCAGGAAGCGCACGGGGGGGGGGCAGGGGGTGAAGGCGGA
GGCGGACGCGCTGGCGGCGCGGAGAGGAGGGCATCGATCGGCTTGCACAC
TACCAGACACTTCGAGGAATCGTCGAGCACCAAGAGGTGTCCGAACTGCC
ACGTGCCCATATTCAAAGACGGTGAGTTGGAGCTTGGCTTCGGAGGTCAC
CGGGGTCCAGTACTATGATAGTGCCGTAGTTTTCCTTGACATACGAAAGA
AACACATACCTACGAAAATAGTGTAGTAAGTATTAATTTTCTCTCGAAAC
CGAGTGCAGAGTAGTGCCCTTGTTGTTTAATTGATTAATTGATTGATTGA
ATATCACGCTTACAACCGACCGGGCCACCAATGGTTGCCAATCCCGCTCC
CTCGTGGTTAGATGACAAATCGAGAGATTGAAAAAAAACTACGCAATAGT
ATATAGTACATACTAAGAAGGAATTGACACAAAATCTTGGAAACGAAGGG
GGCACAGCTCGGAACTTGTGCCTGCTAAGAATCAAGGGAAAAAAAAACGG
CCTCCTCTCCTGTATCAAGGACTCAGCGCACCCGCGATGTCCTTACGCTT
ATCGAGTCTGGCAACCGTTACGCAAAAACGACATACAAAAAAACAAACGC
ATCGTGGACTACGGGCGCGACATATGAATGAATGTGGTATCGTAGCCCAG
GGAAAAAACAAAACAATAAAAGACAACCTAAGAAAGAAGCAGAGAAAAAT
CAGCAAACCCTCTCCTCCGCAGTCTCCCCCGCCACTGTCCCCCAGGCACC
GTCCTTGTCTATAACCCCCTTCCGTAACCCATCCTTCCCATATAGTAACC
CTCACCTTACTTTTCGCCACAAACTTCTACGCGACAGGTGGGTGCAATCA
CATGCACTGCGGCATGTGCCAGCACGAATTTTGCTGGCTGCACCTCACGC
CGTGGGTAATCGGCGGACCGTGTCAGCGAGGGCACTGGTCCAACGACCCC
GTGCTAAACCACGCCTACAACGCGCATCAGGTGGCTGCGGCGGGCTTCAG
GGAGGGCTGCATCATCTCATAA

Coding sequence (CDS) from alignment at S-dermatodea_contig1004:16176..21847-

>mRNA_S-dermatodea_contig1004.37.1 ID=mRNA_S-dermatodea_contig1004.37.1|Name=mRNA_S-dermatodea_contig1004.37.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3252bp|location=Sequence derived from alignment at S-dermatodea_contig1004:16176..21847- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCAAACACGTGGGTTAGCCGCACACCATCGGGTCTCCCTCTTTGCCCCAT
CTGCCGCAAGGAGCTTGGCTTCTGCCCTCACTCGTCTATCGGCACCAGGG
AGAGGTCCAAGTCTATTTCCGGCGCTGGAGCCGCGTCTACGCTTCCTGGC
ACGTTGCCTGGCGCTATCGCCATGAACACGGGTGAGGATGCTCCCCAAGC
AAGCGGGAGCGCCGAGCCAAGAGGCAATTCGGAGCATGATGGAAAGAAGA
GGCGCGGCTCAGGTACACAGGGGGCGGCTCCGGCTAAGGTGCAGCGGCGT
GGGAGGTCAACGATGGGGAAGTCAAACACGTGGGTTAGCCGCACACCATC
GGGTCTCCCTCTTTGCCCCATCTGCCGCAAGGAGCTTGGCTTCTGCCCTC
ACTCGTCTATCGGCACCAGGGAGAGGTCCAAGTCTATTTCCGGCGCTGGA
GCCGCGTCTACGCTTCCTGGCACGTTGCCTGGCGCTATCGCCATGAACAC
GGGTGAGGATGCTCCCCAAGCAAGCGGGAGCGCCGAGCCAAGAGGCAATT
CGGAGCATGATGGAAAGAAGAGGCGCGGCTCAGGTACACAGGGGGCGGCT
CCGGCTAAGGTGCAGCGGCGTGGGAGGTCAACGATGGGGAAGGGCGGATC
GGCATCAGCTGCGGCACCCAACACCTCAAAGGCCAGGACTAAATGTGCCT
CCCGTCGTAGCCCAAGATTCGTGGTCGAAGATGGGCCATCCGGTGGGAGA
GGCGCGGCAAGCGGCGGCGACGGTGCTTGCGCCGATACTAGCAGACGTGC
TGCTGTTCCCAGACATGATCACTTGTTGCGTTTCCCGGGGTTTTCTCTCA
ACGAAAGCGGGAAGGAGTGCCTCGGATGCTACGAAGTCGCGAGGATCACG
ATAAGCTTTGTCTGCGAGGGCGGATCGGCATCAGCTGCGGCACCCAACAC
CTCAAAGGCCAGGACTAAATGTGCCTCCCGTCGTAGCCCAAGATTCGTGG
TCGAAGATGGGCCATCCGGTGGGAGAGGCGCGGCAAGCGGCGGCGACGGT
GCTTGCGCCGATACTAGCAGACGTGCTGCTGTTCCCAGACATGATCACTT
GTTGCGTTTCCCGGGGTTTTCTCTCAACGAAAGCGGGAAGGAGTGCCTCG
GATGCTACGAAGTCGCGAGGATCACGATAAGCTTTGTCTGCGAGGACCGT
CGGATGAAGGAGGTGGAACGACAAGCGGCAGCTGTTGCGGAAGCCCAGTC
CGCCGCCGCATGTTGTTCGGGAAACGCCGAGGGTGCCCCCGCCACCGAGG
AAGCCCCCGCCGCCTTGACCGTCGGATGAAGGAGGTGGAACGACAAGCGG
CAGCTGTTGCGGAAGCCCAGTCCGCCGCCGCATGTTGTTCGGGAAACGCC
GAGGGTGCCCCCGCCACCGAGGAAGCCCCCGCCGCCTTGATGGGCGGCCT
TGACTTGTCCGCTCCGCACATCATGTGCCTGGATTGCTTCCGTGTGTTCG
TGGAGAGCCGCGTGACCGAAGGAAAGCTGGTGACCTCGCGCGACTTCGAG
AGCTACACGGTCGGCTGTCCCATGGGTTGCGCCGACAGCTGTGTCAACCC
TGCATGCTTCGAGGATGGGCGGCCTTGACTTGTCCGCTCCGCACATCATG
TGCCTGGATTGCTTCCGTGTGTTCGTGGAGAGCCGCGTGACCGAAGGAAA
GCTGGTGACCTCGCGCGACTTCGAGAGCTACACGGTCGGCTGTCCCATGG
GTTGCGCCGACAGCTGTGTCAACCCTGCATGCTTCGAGGATATCCTAGGA
GAGGACTTCATGCTGAAGTACCGCCGGTTCGCGGCCATCCACCTCGCGTT
CCACATGCGTACCGTCTGGTGCCCGGGGTGCCACTGCGGCGTCGTCCCGT
CCGCTGCCGCTGCAGCCGCGGCAAAAGCGGCCCGGCACAACCCAGTTCCC
TCGATCCCACCCCCTCCACCCACCCGATCCATGTGGGGCTTGTGGGGGGG
CAGAAGAGGGGTGGAGCCGGCCGCGACCACGGAGCCACCGAGCCGACCCA
GCAACTGCATTGGGTGCCCAGGGTGCCAGGCGTCCCTGTGCATGTCGTGC
AGGGCTCTGCATGACCCTGGGGTATCTTGCGCCGACGCCCGTGCCGAAGC
TAATGCCAAGGAGGACATGATCAACCAGGAAGCGCACGGGGGGGGGGCAG
GGGGTGAAGGCGGAGGCGGACGCGCTGGCGGCGCGGAGAGGAGGGCATCG
ATCGGCTTGCACACTACCAGACACTTCGAGGAATCGTCGAGCACCAAGAG
GTGTCCGAACTGCCACGTGCCCATATTCAAAGACGGATATCCTAGGAGAG
GACTTCATGCTGAAGTACCGCCGGTTCGCGGCCATCCACCTCGCGTTCCA
CATGCGTACCGTCTGGTGCCCGGGGTGCCACTGCGGCGTCGTCCCGTCCG
CTGCCGCTGCAGCCGCGGCAAAAGCGGCCCGGCACAACCCAGTTCCCTCG
ATCCCACCCCCTCCACCCACCCGATCCATGTGGGGCTTGTGGGGGGGCAG
AAGAGGGGTGGAGCCGGCCGCGACCACGGAGCCACCGAGCCGACCCAGCA
ACTGCATTGGGTGCCCAGGGTGCCAGGCGTCCCTGTGCATGTCGTGCAGG
GCTCTGCATGACCCTGGGGTATCTTGCGCCGACGCCCGTGCCGAAGCTAA
TGCCAAGGAGGACATGATCAACCAGGAAGCGCACGGGGGGGGGGCAGGGG
GTGAAGGCGGAGGCGGACGCGCTGGCGGCGCGGAGAGGAGGGCATCGATC
GGCTTGCACACTACCAGACACTTCGAGGAATCGTCGAGCACCAAGAGGTG
TCCGAACTGCCACGTGCCCATATTCAAAGACGGTGGGTGCAATCACATGC
ACTGCGGCATGTGCCAGCACGAATTTTGCTGGCTGCACCTCACGCCGTGG
GTAATCGGCGGACCGTGTCAGCGAGGGCACTGGTCCAACGACCCCGTGCT
AAACCACGCCTACAACGCGCATCAGGTGGCTGCGGCGGGCTTCAGGGAGG
GCTGCATCATCTCATAAGTGGGTGCAATCACATGCACTGCGGCATGTGCC
AGCACGAATTTTGCTGGCTGCACCTCACGCCGTGGGTAATCGGCGGACCG
TGTCAGCGAGGGCACTGGTCCAACGACCCCGTGCTAAACCACGCCTACAA
CGCGCATCAGGTGGCTGCGGCGGGCTTCAGGGAGGGCTGCATCATCTCAT
AA