mRNA_S-dermatodea_contig1004.36.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 313 bits (802), Expect = 1.050e-103 Identity = 148/165 (89.70%), Postives = 158/165 (95.76%), Query Frame = 1
Query: 1 DLYCLDLKTLVWE--ETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLEESGVNTDLELNFKNKVPEEVIEGVKYMNEYAECL 489
DLYCLDLKTLVWE ETEM GDLPKARVAHSCSFDPVG DIYLWGGFTGELSRLADFYVYNCK++ WRRL MEGG+ASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPP+LAVLA+KVLLEESG+NT+LEL FKNKVP+EVIEGVK+MNEYAEC+
Sbjct: 232 DLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAECM 396
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.440e-56 Identity = 95/174 (54.60%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEA-----------SPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLEESGVNTDLELNFKNKVPEEVIEGVKYMNEYAECL 489
DLYCLDL++LVWEET M G+LPKARVAHSCSFD IYLWGGFT ELSRL DF+ ++C T++W R+ E +A +PPARAFHSA F G LY+FSGANGD+RY+DVWR+QVR +PP+L++L A + +SG L+ + P E+++GV+ MNE+A+ L
Sbjct: 237 DLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKI--KSGGEAPLK-EMDMRAPAELVQGVREMNEHADRL 407
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.930e-56 Identity = 98/175 (56.00%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEASPP--------------ARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLE-ESGVNTDLELNFKNKVPEEVIEGVKYMNEYA 480
DLY LDL+TLVW+ M G++P+ARVAHSCSFDP IYLWGGFTGELSRL DF+ Y+ + W + +A+ P ARAFHSAVFHDGALY+FSGANGD+RYNDVWR++VR +PP L VLAA+ LL SGV + L + VP+EV++GV MNE A
Sbjct: 231 DLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCL--ETFVPQEVLDGVLNMNESA 403
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 179 bits (454), Expect = 4.130e-51 Identity = 91/183 (49.73%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNME--------------------GGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLEESGVNTDLELNFKNKVPEEVIEGVKYMNEYAECL 489
D+YCL+L+TLVW + G +P+ARVAHSCSFDP IYLWGGFTGELSRL DFY Y+ T W + +P ARAFHSAVF+ GALY+FSGANGD+RYNDVWRY++R SPP L VLA + LL S + + + +P EV++ V MNE A L
Sbjct: 236 DMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALLH-SRLGVQQMMALEALLPHEVLDAVLTMNESASRL 417
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.690e-42 Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRL----------------NMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVL----------LEESGVNTDLELNFKNKVPEEVIEGVKYMNEYA 480
D++ LDL TL W+E +GD+PK+RVAHSC +D I+LWGGFT ELSRL DFY +C+T++WR PPARAFH+A F + ALY+FSGANGD+RY+DVWRYQ SPP+L VLAA+++ K +P EV + V + N++A
Sbjct: 222 DVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 407
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.820e-41 Identity = 71/132 (53.79%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLEESG 396
D+YCL+L TLVW+ +G+ P++RVAH+CSFD I +WGGF+ L RL DF++ +C T++W PP RAFH+A FH GALYLF GA+GD RYNDVWRY VR SPP+L VLAA+ L G
Sbjct: 224 DVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSN----QPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEG 351
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A7S3XN17_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN17_HETAK) HSP 1 Score: 132 bits (333), Expect = 5.110e-33 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGD-LPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSW----RRLNMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLE 387
D +CLDL+T+VW + M+G LP+ R AH+C +DPVG +Y+WGGF L L D + + T +W R GG +PP R+FH+A FH G+LY F+G++G+ RY+DV RYQ+R +P LA LAA+ ++E
Sbjct: 300 DAFCLDLRTMVWAKLAMSGAALPEGRAAHTCEYDPVGHALYMWGGFNKSLVPLQDLHRLDLATGAWTALCRNAKEGGGGNAPPCRSFHAACFHRGSLYSFNGSDGERRYDDVARYQLRRAPARLAQLAARSVVE 433
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A836CI07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI07_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.590e-27 Identity = 54/127 (42.52%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVL 381
D+Y + + W E G +P R AH C FD IY +GGF ++R +D Y+ T + R ++ PPARAFH+AV +DGALY+ GA+GD+RY DVWR+ +PPT VLAA+ L
Sbjct: 203 DMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANN---VPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 326
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA) HSP 1 Score: 114 bits (286), Expect = 6.060e-27 Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 13 LDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGGEASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAKVLLEESGVNTDLELNFKNKVPEEV---IEGVKYMNEYAE 483
LDL++L W++ ++ GD AR A SC DP ++++GGF + +RL F Y+ ++ W N+ SP ARAFHS ++ G+LYL GANG ++ND+W+Y++R +PPTL +LAA LL L + +P+E+ IE VK + E
Sbjct: 208 LDLRSLEWKQVDVEGDTSVARTAVSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEW---NVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDIWQYRIRSTPPTLQMLAAHALLRLP------RLACQPSLPDEIHSLIEAVKVVRSLPE 358
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.520e-25 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 1 DLYCLDLKTLVWEETEMTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRRLNMEGG---------EASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPTLAVLAAK 375
D+Y L++ T+ W TG +PK RVAH +D + IY+WGGFT L RL DF+ + W L+ + G ++ P RAFH A F+D ++Y+F GA+G R+ D+W+YQ+R SP +L LA +
Sbjct: 224 DVYKLNMITMEWSCVHTTGCIPKGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEKNGWMEKNDRQMKSGPCPRAFHGAFFYDSSMYIFGGADGQNRHEDMWKYQLRCSPLSLLDLAGE 357 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1004.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1004.36.1 >prot_S-dermatodea_contig1004.36.1 ID=prot_S-dermatodea_contig1004.36.1|Name=mRNA_S-dermatodea_contig1004.36.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=148bp MTGDLPKARVAHSCSFDPVGRDIYLWGGFTGELSRLADFYVYNCKTSSWRback to top mRNA from alignment at S-dermatodea_contig1004:7782..9745+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1004.36.1 ID=mRNA_S-dermatodea_contig1004.36.1|Name=mRNA_S-dermatodea_contig1004.36.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1964bp|location=Sequence derived from alignment at S-dermatodea_contig1004:7782..9745+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1004:7782..9745+ >mRNA_S-dermatodea_contig1004.36.1 ID=mRNA_S-dermatodea_contig1004.36.1|Name=mRNA_S-dermatodea_contig1004.36.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at S-dermatodea_contig1004:7782..9745+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |