mRNA_S-dermatodea_contig1004.34.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI) HSP 1 Score: 261 bits (667), Expect = 4.570e-80 Identity = 124/147 (84.35%), Postives = 137/147 (93.20%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPVK 441
YAPFCKHVFVPNFAGVKTSTVKITPEN+KLLV+GYEART +ELP+LSRWFE G+VETPEAKFLDIILYSREQIRKET AM K++ S+APWGIISVKSQDVD+EIPMQPITMMRNALGKEEGGSGV L+R+KY +SV FW+DH PVK
Sbjct: 105 YAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A0M0KA33_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KA33_9EUKA) HSP 1 Score: 211 bits (538), Expect = 9.480e-62 Identity = 100/148 (67.57%), Postives = 119/148 (80.41%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPE-AKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPVK 441
YAPFCKH+FVPNFAGVK + + +TPEN+ L SGYEART QEL VL+RWF K + P A+++DIILYSREQI KE AM ++E + APWGIIS+K+QDV YE+PMQPITMMRNALGKEEGGSGV ++R KY ESVAFW H P+K
Sbjct: 49 YAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPTVARYMDIILYSREQINKEAAAMGREEEPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPIK 196
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S1TVC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVC6_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.000e-61 Identity = 104/148 (70.27%), Postives = 120/148 (81.08%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSV-ETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPVK 441
YAPFCKH+FVPNFAGVK ST+ ITPEN+ LL S YEART QELPVLSR+F +V E PE K+LDIILYSREQI KE M + + APWGIISVK+QDVDYE+PMQPITMMRNALG+++GGSGV L R+KY ESVAFW + P+K
Sbjct: 106 YAPFCKHIFVPNFAGVKASTLPITPENEHLLRSSYEARTEQELPVLSRYFPLAAVGEPPECKYLDIILYSREQIAKEAADMDRAAPDTTAPWGIISVKAQDVDYELPMQPITMMRNALGRDQGGSGVELVREKYDESVAFWSGNAPIK 253
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK) HSP 1 Score: 209 bits (533), Expect = 2.100e-60 Identity = 104/147 (70.75%), Postives = 116/147 (78.91%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPVK 441
YAPFCKH+FVPNFAGV S IT EN LL SGYEART +ELPVL RWF V E +FLDIILYSREQIRKE EAM ++SGSDAPWGI+SVK+QD++YEIPMQPITMMRNALG ++GGSGV LD YA SVAFW DH +K
Sbjct: 95 YAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMG-EDSGSDAPWGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATIK 240
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A835YXC5_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC5_9STRA) HSP 1 Score: 206 bits (525), Expect = 9.070e-60 Identity = 94/143 (65.73%), Postives = 120/143 (83.92%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDH 429
YA FCKH+F+PNF GV+ + V+ITPEN+ LL SGY+ARTP+EL VL+RWF +GSV P A++LD+ILYSR+QIRKE AM ++ GSDAPWG++S+K+QDVD E+PMQPITM+RNALG+++GGSGV LD Y ESVAFW +H
Sbjct: 57 YASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMG-EDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEH 198
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S4A4J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4J5_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.050e-59 Identity = 101/147 (68.71%), Postives = 116/147 (78.91%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPVK 441
YAPFCKHVFV NF K + ITPEN+ LL SGY ART +EL VLSRWF K S+ P AK+LD+ILYSREQIR E AM ++SGSDAPWGI+SVK+QDVD E+PMQPITMMRNALG +EGGSGVALD KY ESVA+W H P++
Sbjct: 71 YAPFCKHVFVENFVNAKGAVAAITPENEHLLRSGYSARTEKELAVLSRWFPKESIAAPTAKYLDLILYSREQIRIENAAMG-EDSGSDAPWGIVSVKAQDVDSELPMQPITMMRNALGADEGGSGVALDAAKYRESVAYWAGHAPIQ 216
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT) HSP 1 Score: 202 bits (514), Expect = 3.730e-58 Identity = 101/147 (68.71%), Postives = 116/147 (78.91%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPE-AKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPV 438
YAPFCKH+FVPNF T + ITPEN+ LL + Y+ART QELPVL+RWF +V P AKFLDIILYSREQIRKE EAM + + ++ PWGIISVK+QDVDYE+PMQPITMMRNALGK EGGSGV L R+KY ESV FWK H P+
Sbjct: 55 YAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTE-PWGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.660e-58 Identity = 100/143 (69.93%), Postives = 114/143 (79.72%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDH 429
YAPFCKH+FVPNFAGV+ S V IT EN+ L+ S Y+ART +EL VL RW K VE +A FLDIILYSREQI KE EAM +++ +DAPWGIISVK+QDVD+EIPMQPITMMRNALGKE GGSGV L R KY ESV FW+ H
Sbjct: 116 YAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSH 258
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S0YN34_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0YN34_9CHLO) HSP 1 Score: 203 bits (516), Expect = 7.590e-58 Identity = 96/148 (64.86%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGS--DAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPV 438
YAPFCKH+FVPNF G K+ ++ ITPEN+K L SGY R P+EL VL+RWF G V PE+KFLDIILYSREQ+ E EA+ E DAPWGIIS+K+QD DYE PMQPITM+RNALG+EEGGSGV LDR+ YA+SVA+W+ H +
Sbjct: 89 YAPFCKHIFVPNFVGAKSGSLLITPENEKFLKSGYTKRRPEELAVLTRWFVAGEVPVPESKFLDIILYSREQLLLEYEALPPSERYELPDAPWGIISIKAQDEDYETPMQPITMLRNALGREEGGSGVKLDREAYAKSVAYWESHATI 236
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Match: A0A7S0W724_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W724_9CRYP) HSP 1 Score: 199 bits (506), Expect = 7.370e-57 Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 1 YAPFCKHVFVPNFA-GVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFEKGSVETPEAKFLDIILYSREQIRKETEAMTKQESGSDAPWGIISVKSQDVDYEIPMQPITMMRNALGKEEGGSGVALDRQKYAESVAFWKDHGPV 438
YAPFCKH+FVPNF G + V ITP+N+ LL S Y+AR EL VL RWF GSVE PEA LD+ILYSREQIRKE AM K+ DAPWG+IS+K+Q +D EIPM PITMMRNALGKEEGGSGV +DR+KY ESVAFW H +
Sbjct: 63 YAPFCKHLFVPNFLPGARVEAVPITPDNEHLLRSEYQARKEGELAVLQRWFPIGSVEAPEATHLDLILYSREQIRKENAAMGKEPQDEDAPWGLISIKAQGIDREIPMNPITMMRNALGKEEGGSGVPIDREKYRESVAFWSKHAVI 209 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1004.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1004.34.1 >prot_S-dermatodea_contig1004.34.1 ID=prot_S-dermatodea_contig1004.34.1|Name=mRNA_S-dermatodea_contig1004.34.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=148bp YAPFCKHVFVPNFAGVKTSTVKITPENQKLLVSGYEARTPQELPVLSRWFback to top mRNA from alignment at S-dermatodea_contig1004:171..2978+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1004.34.1 ID=mRNA_S-dermatodea_contig1004.34.1|Name=mRNA_S-dermatodea_contig1004.34.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2808bp|location=Sequence derived from alignment at S-dermatodea_contig1004:171..2978+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1004:171..2978+ >mRNA_S-dermatodea_contig1004.34.1 ID=mRNA_S-dermatodea_contig1004.34.1|Name=mRNA_S-dermatodea_contig1004.34.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at S-dermatodea_contig1004:171..2978+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |