prot_S-latissima_F_contig98.17525.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig98.17525.1
Unique Nameprot_S-latissima_F_contig98.17525.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length166
Homology
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5JLQ5_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ5_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 6.680e-28
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGC 146
            EL   Y RVT+E IRA    L    M P ++PD Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL    DP F++  +Q+TMR+++LD  SRK   G IAG G SM   A+        +ICH+C + GH +  C
Sbjct:   54 ELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLIVLRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFSMVTTASE-------IICHSCYEPGHIRRNC 191          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.650e-27
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            EL   Y RVT+E IRA    L    M P ++PD+Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL  + DP F++  +Q+TMR+++LD  SRK   G IAG G +M   A       S +ICH+C + GH +  C        K  KPA
Sbjct:  121 ELCNNYDRVTDEVIRAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTA-------SDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA 272          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5K0G3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G3_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.360e-26
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            EL   Y RVT+E IRA    L    M P +DPD Y  Q   LR++L  + EP++DR F DI VQG+ + ++D+KL  + DP F++  +Q+TMR+++LD  SRK   G IAG G +M   A       S +ICH+C + GH +  C +      K  KPA
Sbjct:   57 ELCNNYDRVTDEVIRAKMEELENNPMNPGEDPDDYCNQKHLLRTQLDTMGEPISDRRFKDICVQGISDEHKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGCIAGRGFAMATTA-------SDIICHSCYEPGHIRRNCPMIKNRAKKKTKPA 208          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.470e-25
Identity = 66/159 (41.51%), Postives = 88/159 (55.35%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            EL   Y +VT+E IRA    L  T MEP Q+PD Y  Q   LR +   + E ++D +F D  V G    Y+D+K+  Y DPDF++ K+QTTMRH++LD  SR    G+IAG G +MTA    S +P+    C +CG+ GH    C        K  KPA
Sbjct:   99 ELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATT--SEEPT----CFDCGEKGHIWRNCSEKRGKGKKKTKPA 251          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.570e-25
Identity = 64/159 (40.25%), Postives = 88/159 (55.35%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            EL   Y RVT+E IRA    L    M P ++PD Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL  + DP F++  + +TMR+++LD  SRK   G IAG G +M   A       S +ICH+C + GH +  C        K  KPA
Sbjct:  139 ELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTA-------SDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA 290          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.080e-23
Identity = 59/145 (40.69%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGC 146
            EL   Y RVT+E IR     L    M   ++PD Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL  + DP F++  +Q+TMR+++LD  SRK   G IAG G +M   A+ S       ICH+C + GH +  C
Sbjct:   97 ELCNNYDRVTDEVIRTKMEELENNPMNLGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDS-------ICHSCYEPGHIRRNC 234          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.020e-22
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   28 MEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            M P ++PD Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL  + DP F++  +Q+TMR+++LD  SRK   G IAG G +M   A       S +ICH+C + GH +  C        K  KPA
Sbjct:    9 MNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKEWKGRIAGRGFAMATTA-------SDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA 135          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.520e-20
Identity = 54/134 (40.30%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   28 MEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPGKLYGKVKKPA 160
            M P ++PD Y  Q   L  +L  + EP++DR F DI VQG  + Y D+KL  + DP F++  +Q+TMR++YLD  SRK   G IAG G +M   A       S +ICH+C + GH +  C        K  KPA
Sbjct:    9 MNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLDEQSRKGWKGRIAGRGFAMATTA-------SDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA 135          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5K8X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.610e-20
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK-MTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGC 146
            EL   Y RVT+E IRA    L    M P ++PD Y  Q   LR+ L  + EP++DR F +I VQG  + Y+  KL    DP F+   +Q+TMR+++ D  SRK   G I G      A A+++SD    +ICH+C + GH +  C
Sbjct:  121 ELCNNYDRVTDEVIRAKMEELENKPMNPGENPDDYFNQKHLLRAHLDKMGEPISDRRFKNICVQGFSDEYKGFKLMVVRDPTFNALDMQSTMRNIFSDEQSRKGWKGRIGGR---EFATASTASD----IICHSCYEPGHIRRNC 258          
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Match: A0A6H5L2I7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.500e-20
Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    3 ELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAAVKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLDGLSRK 105
            EL   Y RVT+E IRA    L    M P ++PD Y  Q   LR++L  + EP++DR F DI VQG  + Y+D+KL  + DP F++  +Q+T+R+++LD  SRK
Sbjct:   78 ELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLVVFRDPTFNVLNMQSTVRNIFLDEQSRK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig98.17525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JLQ5_9PHAE6.680e-2842.07CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JF66_9PHAE2.650e-2740.88CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0G3_9PHAE2.360e-2640.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KW66_9PHAE1.470e-2541.51CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE3.570e-2540.25CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KT84_9PHAE1.080e-2340.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZM5_9PHAE1.020e-2240.30CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE1.520e-2040.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8X5_9PHAE4.610e-2039.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2I7_9PHAE7.500e-2043.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..88
e-value: 4.4E-7
score: 29.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 133..146
score: 9.274
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 123..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig98contigS-latissima_F_contig98:421518..422015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig98.17525.1mRNA_S-latissima_F_contig98.17525.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig98 421515..422015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig98.17525.1 ID=prot_S-latissima_F_contig98.17525.1|Name=mRNA_S-latissima_F_contig98.17525.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=166bp
MNELEAKYLRVTNETIRALQAALAATTMEPDQDPDHYIMQATRLRSRLAA
VKEPVTDRHFTDIIVQGLPESYRDIKLTTYNDPDFDLSKIQTTMRHLYLD
GLSRKMTGNIAGHGTSMTAVAASSSDPSSGVICHNCGKDGHYKSGCIVPG
KLYGKVKKPAAGPNNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf