prot_S-latissima_F_contig97.17459.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-latissima_F_contig97.17459.1
Unique Name	prot_S-latissima_F_contig97.17459.1
Type	polypeptide
Organism	Saccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length	277

Homology

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: D7FHL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL8_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 3.160e-115
Identity = 178/223 (79.82%), Postives = 190/223 (85.20%), Query Frame = 0

Query:    1 MEKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLV-------------------MRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACE 204
            MEKGS+ATLGSFVGLAPEGEVLVQGVNCLGRCNKGPN+RVRQ  G+WLEFNRI++VE+VYKILRDYLGADVSKEAALCLKYNF AN+AL+RNEVTLAIDYYDKAI TGY DQQGVLLV                   MRATAF+QRAYSHGRALT+LLQKVVVD PTQ TLD LHELW  SG SA++VLLG FAQDCEGRGSLYQKTKFRYGLYEFALLR  E
Sbjct:  202 MEKGSAATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNVRVRQETGNWLEFNRIENVERVYKILRDYLGADVSKEAALCLKYNFLANAALNRNEVTLAIDYYDKAIDTGYADQQGVLLVRTSCGREGSWCGTVVDDEVMRATAFIQRAYSHGRALTELLQKVVVDRPTQTTLDVLHELWEASGASARMVLLGKFAQDCEGRGSLYQKTKFRYGLYEFALLRVGE 424

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A835YYQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ6_9STRA)

HSP 1 Score: 294 bits (753), Expect = 1.860e-94
Identity = 160/279 (57.35%), Postives = 188/279 (67.38%), Query Frame = 0

Query:    2 EKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNK----------------GPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWG---HSGPSA--------------------KVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQ 241
            E+GS ATL SFVGLAPE EVLVQGVNCLGRCN                 GPNLRV Q DG+WLEFNRIDSVE+VYKILRD+L   VS+ AA CLKYNF  NS LD+NEVT AI+ Y+KAI+ G+ DQ+GVLLVMRATA++QRAYSH RALT LL +V  DMP   TL+ +H+L     H+ P++                       L+   A  C  + +LYQ TKFRYGLYE ALLRAC DALRAT+ LP Y +CWL+AGDAL  LR+  EAA YY+
Sbjct:   33 ERGSGATLSSFVGLAPEDEVLVQGVNCLGRCNXXXXXXXXXXXXXXXXXGPNLRVLQEDGTWLEFNRIDSVERVYKILRDFLSVGVSRTAAECLKYNFQGNSHLDKNEVTEAIECYNKAISMGWADQEGVLLVMRATAYLQRAYSHRRALTALLSRVARDMPGTGTLEIIHKLAPSNPHASPNSVXXXXXXXXXXXXXXXXXXXXXXLVDRLAAYCREKETLYQTTKFRYGLYEIALLRACNDALRATQLLPDYAKCWLRAGDALAELRRFSEAADYYE 311

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A7R9U417_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U417_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.380e-74
Identity = 124/266 (46.62%), Postives = 171/266 (64.29%), Query Frame = 0

Query:    2 EKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVV----VDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETLRE 263
            EKGS ATL SF+GL P+  VLV GV CLG+CNKGPN+++   +G+W E NR+DSV+KVY+IL D+L   VS  AA CL++NF  N+ LDRNEVT AI  Y+KAI  G+ DQ+GV+LVMR+TA++QRA+SH   + + L +      ++    A      EL     P     +L +     E +   Y   K  +GLYEFA+L+A +DA+RAT+ LP Y +CWL+AG+AL  LR+  EA  Y+  A+ LD S+ S + P +  L+E
Sbjct:   52 EKGSGATLASFIGLIPDDNVLVSGVGCLGKCNKGPNIQIMHRNGTWYELNRVDSVDKVYRILTDHLQCRVSPAAAECLQHNFEGNAHLDRNEVTQAIASYNKAIDAGFKDQEGVILVMRSTAYLQRAFSHRIDVRNTLDRNADFQKMEAAIIAAFTAAMEL-----PYWTNTMLRLILSIGEAQAETYHNLKLHHGLYEFAVLQATDDAVRATQLLPNYSKCWLRAGEALAELRRTDEALQYFDTAVSLDPSLASVVEPIVNHLQE 312

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A4D9DHN8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHN8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.750e-66
Identity = 113/264 (42.80%), Postives = 171/264 (64.77%), Query Frame = 0

Query:    1 MEKGSSATLGSFVGLAPEG-EVLVQGVNCLGRCNKGPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETLRE 263
            M++G+ AT+GSF+GL P G +V VQGV+CLGRCN+GPNLR+ +++G++ E + +DSV+KVY +    LG  +++ +A CLK NF  N+ LD+NEV  AI+ YDKAI   +  Q+GVL VMR+TA++QRAY+H     +L+++    +P QA L  L      S P   + +L   ++  + R  LY+ TKF++ L+EFA+ +AC DAL AT  LP + + W++AG  L  LR+ K+A   Y+V + +D      L  +IE L +
Sbjct:    1 MQRGAGATMGSFIGLTPYGSKVRVQGVDCLGRCNRGPNLRLLRSNGTFEELSYVDSVDKVYDVFTSQLGIRINQSSADCLKLNFQGNAHLDKNEVDRAIECYDKAIPLSHRGQEGVLRVMRSTAYLQRAYTHFMQFRELVEQAAQPLPDQAFLAFLQATHA-SSPFLVLPVLAHLSRAYQARDRLYRLTKFQFSLFEFAVHKACHDALTATHILPHFTKSWIRAGHGLRFLRRFKDAIACYRVVIQIDPGAGKDLEQEIELLEK 263

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A6H5JEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH7_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 6.970e-53
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0

Query:  168 VVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKI 258
            +VLLG FAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLP YP+CWLKAGDAL ALRKPKEAAGYYQVALDLD SMESYL+PKI
Sbjct:    1 MVLLGKFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPNYPKCWLKAGDALAALRKPKEAAGYYQVALDLDPSMESYLKPKI 91

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A1Z5JQ11_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ11_FISSO)

HSP 1 Score: 180 bits (457), Expect = 3.380e-51
Identity = 100/263 (38.02%), Postives = 158/263 (60.08%), Query Frame = 0

Query:    1 MEKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNLR-VRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETLR 262
            +EK ++  L +F+ LAP    +   V       KG  +R +        E + +DSV+KVY+IL  ++   VS +   CLK+ +  N  L+  ++ LAID YDKAI TG   Q+G++L+MR+TA++QRA +H   L +++ +++  +P+        E   H  PS    +   F +  E +   ++KT++R+GLY++ALL+A +DA+RAT+ LP Y   WL+AG+ L+ L + KE+A YY+ A+DLDSS+E  LRP IE LR
Sbjct:   67 LEKRANTALDAFLALAPSSVEVTPAV--FKSKAKGGMIRCISSKKNKTFEVSNVDSVDKVYRILTKHMELKVSTKVCDCLKWKYKGNGHLEAGQIDLAIDAYDKAIETGVTQQEGIVLLMRSTAYLQRAITHRTTLKEIVNELIGMVPSALPF-VFDEAIRH--PSLANAIFRKFVEQTERQDKHFRKTQYRHGLYQYALLKAAQDAIRATQLLPYYEVAWLRAGEILSELWRLKESAQYYEKAIDLDSSLEPSLRPVIERLR 324

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A7S1Z4G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4G4_TRICV)

HSP 1 Score: 176 bits (447), Expect = 4.830e-51
Identity = 89/214 (41.59%), Postives = 142/214 (66.36%), Query Frame = 0

Query:   51 NRIDSVEKVYKILRDYLG-ADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETLRE 263
            N +DSV+KVY+IL  ++G A +S  A  CLK+N+  N+ L++ ++  AI  YDKAI TGYV+Q+GV+L+MRATA+++RA+ H R L  ++  +   +P   +L  L+ +     P+    +      +C  +   +++ K+R+GLYE+ALLRA  D+LR+T+ LP+Y + WL+AGD+L  LRK +E+A YY+ A++LD S+   L P IE L++
Sbjct:    2 NNVDSVDKVYRILTKHMGIAGISSVACECLKWNYRGNAHLEKGDIADAIAAYDKAIDTGYVEQEGVVLLMRATAYLKRAFEHQRELKTVVSDLSDAVPDPQSLRALYGV-AKENPAFAGPIFRKVVSECRSQDKKFRQIKYRHGLYEYALLRAARDSLRSTQLLPSYAKTWLRAGDSLAELRKLRESAQYYERAMELDPSLAEALLPVIERLKK 214

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A7S3XUL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUL9_HETAK)

HSP 1 Score: 158 bits (400), Expect = 1.560e-43
Identity = 91/249 (36.55%), Postives = 142/249 (57.03%), Query Frame = 0

Query:   19 GEVLVQGVNCLGRCNKGPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGY-VDQQGVLLVMRATAFMQRAYSHGRALTDLLQKV-----VVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETL 261
            G V V GV+CLGRC +GPN+R +    +WL+F+ +DSV++  +IL + +G  VS++ A CL  N   N  L  N+V  A+++YD+A+A G   DQ+GV+ +MRATA +QRA  H   +    Q+V     V   P         EL  H  P      +   A+  + + S + +  F+  +Y+ ++  ACEDA+ AT  LP +PQ W++AG+  T L+  K A  +Y+VA+ L+ ++E  LRP +  L
Sbjct:    5 GAVNVDGVSCLGRCKRGPNVRCQLGRDAWLDFSGVDSVDQARQILVETMGVPVSQKVATCLDMNLKGNYYLANNKVGKALEHYDRALAAGRGTDQEGVVALMRATARLQRALGHRGQMEGAAQRVGGMAAVAAGPNGRLF--FQELSPH--PRLLAFFIKEVARSFKKQESRFDEFMFKKLMYDHSIAEACEDAVLATRLLPNFPQSWIRAGEVYTELKMFKAAEEHYEVAMALNRALEGDLRPVVARL 249

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: A0A7S3L8D0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8D0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.020e-42
Identity = 97/272 (35.66%), Postives = 159/272 (58.46%), Query Frame = 0

Query:    1 MEKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNKG--PNLR-VRQNDGSWLEFNRIDSVEKVYKILRDYLGAD-VSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVD--QQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALLRACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSMESYLRPKIETLREGSG 266
            MEKG++ATL +F+ L     V V+      +   G  P +R V     S +E   +DSV+KVY++L  ++  + +S+ A  CL+Y + AN  L+  +V+LAI+ Y KA+ +   D  Q+GV+L +R+ A++QRA  H   L D++Q+++  +P    L +L ++  +  P +  V+  +  QD E +   +  T++R+GLY++ALL+A +DAL+ATE LP Y   W++A D +  L K  EA  YY+ A+ LD S+   L P +E L+   G
Sbjct:   93 MEKGAAATLDAFLSLTQSRRVQVKAAFLPKQTKSGGYPWIRCVSIQKSSAIELFGVDSVDKVYRVLTKHMQIEGISRRACRCLQYKYKANGFLEAGKVSLAIEAYQKALQSSKGDKQQEGVILFLRSAAYLQRAEQHRDELKDIVQELINMVPPPPKLVSLLDVAYYVPPLSGAVMRKIL-QDSEAQDRQFLSTQYRHGLYQYALLQAAQDALKATEVLPHYAAAWVRAADIMGELWKLPEAILYYERAIALDESLRPSLIPVVERLQRQQG 363

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BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Match: W7U8R6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8R6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 9.360e-41
Identity = 75/153 (49.02%), Postives = 111/153 (72.55%), Query Frame = 0

Query:    1 MEKGSSATLGSFVGLAPEG-EVLVQGVNCLGRCNKGPNLRVRQNDGSWLEFNRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDYYDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQATL 152
            M++G+ AT+GSF+GL P G +V VQGV+CLGRCN+GPNLR+ +++G++ E + +DSV+KVY +    LG  +++ +A CLK NF  N+ LD+NEV  AI+ YDKAI   +  Q+GVL VMR+TA++QRAY+H     +L+++    +P QA L
Sbjct:  205 MQRGAGATMGSFIGLTPYGSKVRVQGVDCLGRCNRGPNLRLLRSNGTFEELSYVDSVDKVYDVFTSQLGIRINQSSADCLKLNFQGNAHLDKNEVDRAIECYDKAIPLSHRGQEGVLRVMRSTAYLQRAYTHFMQFRELVEQAAQPLPDQAFL 357

The following BLAST results are available for this feature:

BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot

BLAST of mRNA_S-latissima_F_contig97.17459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
D7FHL8_ECTSI	3.160e-115	79.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YYQ6_9STRA	1.860e-94	57.35	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9U417_9STRA	6.380e-74	46.62	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A4D9DHN8_9STRA	2.750e-66	42.80	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A6H5JEH7_9PHAE	6.970e-53	92.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1Z5JQ11_FISSO	3.380e-51	38.02	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]
A0A7S1Z4G4_TRICV	4.830e-51	41.59	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A7S3XUL9_HETAK	1.560e-43	36.55	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S3L8D0_9STRA	4.020e-42	35.66	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
W7U8R6_9STRA	9.360e-41	49.02	Uncharacterized protein n=1 Tax=Nannochloropsis ga...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47682	FAMILY NOT NAMED	coord: 3..106 coord: 200..251
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 16..72
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..254

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-latissima_F_contig97	contig	S-latissima_F_contig97:485501..495031 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Saccharina latissima female	2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90	2022-09-16
OGS1.0 of Saccharina latissima SLPER63f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-latissima_F_contig97.17459.1	mRNA_S-latissima_F_contig97.17459.1	Saccharina latissima SLPER63f female	mRNA	S-latissima_F_contig97 484554..495434 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-latissima_F_contig97.17459.1 ID=prot_S-latissima_F_contig97.17459.1|Name=mRNA_S-latissima_F_contig97.17459.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=277bp
MEKGSSATLGSFVGLAPEGEVLVQGVNCLGRCNKGPNLRVRQNDGSWLEF
NRIDSVEKVYKILRDYLGADVSKEAALCLKYNFSANSALDRNEVTLAIDY
YDKAIATGYVDQQGVLLVMRATAFMQRAYSHGRALTDLLQKVVVDMPTQA
TLDTLHELWGHSGPSAKVVLLGMFAQDCEGRGSLYQKTKFRYGLYEFALL
RACEDALRATETLPTYPQCWLKAGDALTALRKPKEAAGYYQVALDLDSSM
ESYLRPKIETLREGSGDDALATIAGF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR011990	TPR-like_helical_dom_sf