prot_S-latissima_F_contig96.17356.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17356.1
Unique Nameprot_S-latissima_F_contig96.17356.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length482
Homology
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 1.820e-122
Identity = 341/555 (61.44%), Postives = 364/555 (65.59%), Query Frame = 0
Query:    1 MAPPQEGSA-SFRQQSAA-YATEPKRMRLSSSARXXXXXXXXXXXX------------RASTGAPTAMTNKGSVYKAQRGRAVTAAAVKAKAPTTTHRRRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSEHEADRQAVIHKQRQLLEQQQQAEDRAH-----------AQLHGGSFSVGREEFDDLDEYHRGMDEA--CSSEEDEREAXXXXXXXXXXE------------------------------------DC------GDGYDEVC-----SRSSRSMSSSXXXXXXXXXXXXGGVSGAHHHQAXXXXXXXXXXXXXXAFEPAYYSRAQAGXXXXXXXXXXXXXXXXXXXXXXXXQPHSRERGCSDGESDSDYATAADVATASPLIPDAEQPSAQEGMGFPYAEDLLGYEMQSWYCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFMGRQQQ---SEELWGTSVGANLGWGFGDFAQAYSDGGSRASSGSMSSGSLSCDDDCLPSALPPLMGIS 478
            MAPPQE S+ SFRQ   A YATEPKRMRLS +A+ XXXXXXXXXXX            RASTGAPTAMTNKGSVYKAQRGRAV+AAAVKAKAPTT HRRRGR+GKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFA++AVCNFDSEHEADRQAVIHKQRQLL                      AQLHGGSFSVGREEFDDL+EYHRGMDEA  CSSEED+ E           +                                    +C      GD Y+E         S RSMS S        XXXX           XXXXXXXXX     A   A+       XXXXXXXXXXXXXXXX        Q   R   CS GESD     +++  T S L  ++   + QEGMGFP AEDLLGYEMQSWYCC XXXXXXXXXXXXXXXXXXXXXXXXXXXX           SEELWGT+VGANLGWGFGDFAQ YSDGGSRASSGSMSS SLSCDD+ +PSALPPLMG+S
Sbjct:    1 MAPPQESSSGSFRQHEVAEYATEPKRMRLSGAAKSXXXXXXXXXXXXXXXXXXXXXXXRASTGAPTAMTNKGSVYKAQRGRAVSAAAVKAKAPTT-HRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNEESLHGDDIDDDIDDSVHGEEEDHRRGRXXXRLNGDDDDELPAAECDMSDEGGDRYEEDGVIGGGGSSGRSMSCSYSSAMSTGXXXXXXXXXXXXXXXXXXXXXXXXEVATVADGSAFXXXXXXXXXXXXXXXXXXXXXXXDLHTQQLEQQRGR---CSSGESD----CSSEFVTPSLLREESLSSTTQEGMGFPVAEDLLGYEMQSWYCCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQMYSDGGSRASSGSMSS-SLSCDDEYVPSALPPLMGMS 546          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: D8LM11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM11_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 5.900e-54
Identity = 190/428 (44.39%), Postives = 215/428 (50.23%), Query Frame = 0
Query:  107 AVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSEHEADRQAVIHKQRQLLEQQQQAEDRAH-----------AQLHGGSFSVGREEFDDLDEYHRGMDEA--CSSEEDERE------AXXXXXXXXXXEDCGDGYDEVCSRSSRSMSSSXXXXXXXXXXXXGGVSGAHHHQAXXXXXXXXXXXXXXAFEPAYYSRAQAGXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------QPHSRERG-CSDGESDSDYATAADVATASPLIPDAEQPSAQEGMGFPYAEDLLGYEMQSWYCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFMGRQQQSEELWGTSVGANLGWGFGDFAQAYSDGGSRASSGSMSSGSLSCDDDCLPSALPPLMGIS 478
            +V++  + +LYLGVYESEVDAAKAHDRAARFHFA++AVCNFDSEHEADRQAVIHKQRQLL                      AQLHGGSFSVGREEFDDL+EYHRGMDEA  CSSEED+ E      +          ED   G +E   R  R     XXXXXX      G +S     +               +   +Y S    G     XXXXXXXXXXXXXXXXXXX                                    Q   ++RG CS GESD     ++D  T S L  ++   + QEGMGFP AEDLLGYEMQSWYCC                                  Q   E    TS G             YSDGGSRASSGSMSS SLSCDD+ + SALPPLMG+S
Sbjct:   10 SVLFSPKYKLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNDESLHGDDIDDDIEDSVHGGEEEDHRRGRL---DXXXXXXELPAAEGDMSDEGGDRYEEDGVIGGGGTSGRSMSCSYSSAMSTGSMSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHAQQLEQQRGRCSSGESD----CSSDFVTPSLLREESMSSTTQEGMGFPVAEDLLGYEMQSWYCC----------------------------------QDDEERSPSTSGGT------------YSDGGSRASSGSMSS-SLSCDDEYVSSALPPLMGMS 383          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.370e-28
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0
Query:   78 APTTTHRRRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSEHEADR 155
            AP T  RRRGRKG+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EADR
Sbjct:  127 APVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 204          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.430e-28
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0
Query:   78 APTTTHRRRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSEHEADR 155
            AP T  RRRGRKG+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EADR
Sbjct:  114 APVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 191          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.720e-27
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0
Query:   82 THRRRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 147
            T RRRGRKGKS+YRGVCVTREGKWRAVIYKERKQLYLGV+ESE+DAAKAHDRAAR+HF   A+ NF
Sbjct:   19 TARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.360e-22
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0
Query:   94 YRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 147
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESEVDAAKAHDRAAR HF + A+ NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 7.620e-14
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0
Query:   85 RRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 147
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE DAA+A+D AA  HFAE A  NF
Sbjct:  341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 7.900e-14
Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   85 RRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 147
            RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F + AV NF
Sbjct:  143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.870e-14
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   85 RRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSEHEA 153
            RRGRKGKS+YRGV  TREGK+RAV+Y ERKQ+YLGVY  EV AA+AHD+    H   +A  NF  E  A
Sbjct:  125 RRGRKGKSIYRGVSHTREGKYRAVLYVERKQIYLGVYNDEVSAARAHDKGVLAHGLGHAYLNFKLEEAA 193          
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 9.630e-14
Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   85 RRGRKGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 147
            RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F + AV NF
Sbjct:  156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JUY3_9PHAE1.820e-12261.44AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LM11_ECTSI5.900e-5444.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ71_ECTSI5.370e-2879.49AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE7.430e-2879.49AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CI56_9STRA1.720e-2784.85AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA1.360e-2287.04AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
D8LFR4_ECTSI7.620e-1465.08Pathogenesis-related transcriptional factor and ER... [more]
A0A6V1UZI2_HETAK7.900e-1461.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZDL0_9STRA8.870e-1462.32AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S3Y6J2_HETAK9.630e-1461.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 93..154
e-value: 7.1E-9
score: 45.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 93..148
score: 12.602
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 93..150
e-value: 2.1E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR32467:SF27AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE2coord: 27..135
coord: 89..302
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 27..135
coord: 89..302
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 92..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:491483..495459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17356.1mRNA_S-latissima_F_contig96.17356.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 491458..495893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17356.1 ID=prot_S-latissima_F_contig96.17356.1|Name=mRNA_S-latissima_F_contig96.17356.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=482bp
MAPPQEGSASFRQQSAAYATEPKRMRLSSSARSTAAAAGSSTTTRASTGA
PTAMTNKGSVYKAQRGRAVTAAAVKAKAPTTTHRRRGRKGKSVYRGVCVT
REGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAENAVCNFDSE
HEADRQAVIHKQRQLLEQQQQAEDRAHAQLHGGSFSVGREEFDDLDEYHR
GMDEACSSEEDEREADAEAEREGDGEDCGDGYDEVCSRSSRSMSSSCSSS
TGSMSDDCGGVSGAHHHQAEASGSSAAAAAAASAFEPAYYSRAQAGTAAA
AASAGAGRGGGGVGGVGNGNQPHSRERGCSDGESDSDYATAADVATASPL
IPDAEQPSAQEGMGFPYAEDLLGYEMQSWYCCQDDDDRSPASSGGAPYES
QQQQQQQQQQQPFMGRQQQSEELWGTSVGANLGWGFGDFAQAYSDGGSRA
SSGSMSSGSLSCDDDCLPSALPPLMGISGEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf