prot_S-latissima_F_contig995.17650.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig995.17650.1
Unique Nameprot_S-latissima_F_contig995.17650.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length231
Homology
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BLAST of mRNA_S-latissima_F_contig995.17650.1 vs. uniprot
Match: D8LAU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU9_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 6.970e-22
Identity = 77/171 (45.03%), Postives = 95/171 (55.56%), Query Frame = 0 
Query:   63 RDRGGRPYSLLFASKDSREPTDQEDDESPQPPPPLGSAQDGNAETEIDTDLNTNPRGGQITPPSSDATDAPEPPTRNEQTLAEARAAAADSNADGEQAAPPQVPDGDGQADGGG--EPEVDWDKAWASTRQKMDKDRKAAPAFSGRKQVVATKNSDGDYDFVEISADGSRR 231
            R R  RPY+ LF S D     D    +SP P    G+A D   E        ++P GG    P +D                +   + AD+ A GE   PPQ  +G+  A G G  E +VDWDKAWASTRQ+M+++++AAPAFSGRKQVVATKN DG YDF EISADGS R
Sbjct:   54 RRRPHRPYASLFDSGDENNARD----DSPNP----GNA-DSQGEAPESESAPSSPDGGAKPVPRADE---------------QLTGSLADAGATGE--GPPQA-EGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSR 197
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig995.17650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAU9_ECTSI6.970e-2245.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig995contigS-latissima_F_contig995:70376..71068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig995.17650.1mRNA_S-latissima_F_contig995.17650.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig995 69283..71068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig995.17650.1 ID=prot_S-latissima_F_contig995.17650.1|Name=mRNA_S-latissima_F_contig995.17650.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=231bp
MGAIGLLLHHSHGGFQAAAAFAAPPMRPASAPIFRAHPAAATAATAWTST
STTAKTRRCRRHRDRGGRPYSLLFASKDSREPTDQEDDESPQPPPPLGSA
QDGNAETEIDTDLNTNPRGGQITPPSSDATDAPEPPTRNEQTLAEARAAA
ADSNADGEQAAPPQVPDGDGQADGGGEPEVDWDKAWASTRQKMDKDRKAA
PAFSGRKQVVATKNSDGDYDFVEISADGSRR
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