prot_S-latissima_F_contig995.17646.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig995.17646.1
Unique Nameprot_S-latissima_F_contig995.17646.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length555
Homology
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: D8LAU6_ECTSI (rRNA-processing protein EFG1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU6_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.100e-91
Identity = 201/324 (62.04%), Postives = 222/324 (68.52%), Query Frame = 0
Query:  118 KTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERLLKAALERGEAAGWAEFQENLEKFVSG--DRGRKKRDNVAAVEGEAAGGEGGEPSVKRKKGLDGLAVVAQEKLWDDEEEAVEGEGEEGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKGRPXXXXXXXXXTTTPVLAPDGAGSSRSTESDSEGGLSGDEGFGAAASDEDDAYSFAEARMRWASG 439
            K K PS KNRIRSLTRLMN+PGI EEQRL L++QVEELEGK +EREK E ER+LAIKYHK KFFDRRKALRRLAQ+HRKLKGDI++  R ELE+ R +EE DLKYVLYFPKDKKY+PL KGKEGPPRAQ+SH R LK AL RGEAAGW EFQENL+KFV+G  + GR K     AV+  AA  EG    VKR KG+  L VVAQ+KLWDD E+    EG     XXXXXXXXXX                    +  K +P               A D         SDS G LSGDEGFGAAASDEDDAYSFAEARMRWASG
Sbjct:  133 KGKNPSAKNRIRSLTRLMNKPGIEEEQRLHLQRQVEELEGKVSEREKQERERTLAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAARAELERKRDTEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHVRFLKEALVRGEAAGWTEFQENLDKFVTGGGEGGRPK----VAVDAAAAAEEG---DVKRNKGIGALPVVAQQKLWDDGEDNSSAEGXXXXXXXXXXXXXXXGDGVAGQQGAGKDAAPAARGKKVKRQPTESGSGSWEPEQGEAAGD--------SSDSAGELSGDEGFGAAASDEDDAYSFAEARMRWASG 441          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: Q015G9_OSTTA (rRNA-processing protein EFG1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q015G9_OSTTA)

HSP 1 Score: 81.6 bits (200), Expect = 1.780e-13
Identity = 54/139 (38.85%), Postives = 88/139 (63.31%), Query Frame = 0
Query:  115 KSSKTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQ-DDVRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERL 252
            K ++ + PSVKN+IRS+TRL+ RP + ++ R   ++++E+LE +  + ++ E E+ L+ +YHK+KFF+R K  RR+AQ+ R+ +G    DD   EL + R+    DL+YV +FP+ +KYV +         A K  ERL
Sbjct:   17 KHAQARRPSVKNQIRSITRLLARPNVPQKLREEKQRELEKLERQGRDNKRVEREKKLSTRYHKVKFFERVKLTRRIAQLEREKEGGAGGDDAEAELSRLRE----DLEYVTHFPRGEKYVSVLVSDGDTEHATKERERL 151          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: R7SXP4_DICSQ (rRNA-processing protein EFG1 n=1 Tax=Dichomitus squalens (strain LYAD-421) TaxID=732165 RepID=R7SXP4_DICSQ)

HSP 1 Score: 79.7 bits (195), Expect = 9.250e-13
Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 0
Query:  116 SSKTKAPSV---KNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDV--------RLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERLLKAALERGEA 262
            SS T  P V   K  +R   RL+ +  +  + R+  +++++ LE   A+ E+  +ERSLA +YHK+KFF+R+K LR++AQV R+LKGD +D          R +LE+       DL YVL++PK KKY+ L      PP  +K  E   +   E+G+A
Sbjct:   36 SSPTALPGVQKIKAALRQTRRLLAKDSLAADVRVKTERRLKSLEADLAKAERARVERSLAARYHKVKFFERQKLLRKIAQVKRQLKGDGEDGEGETLGKKERKKLEKRLGELRVDLNYVLHYPKTKKYISL-----FPPEVRKGEEAEAETVDEKGKA 188          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A371CMD6_9APHY (rRNA-processing protein EFG1 n=2 Tax=Polyporus TaxID=5637 RepID=A0A371CMD6_9APHY)

HSP 1 Score: 78.2 bits (191), Expect = 2.810e-12
Identity = 55/169 (32.54%), Postives = 94/169 (55.62%), Query Frame = 0
Query:  111 PVPSKSSKTKAPSV---KNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERLLKAALERGEAAGWAEFQENLEKFV 276
            P    SS    P V   K  +R   RL+ +  +  + R++ +++++ LEG+ A+ E+  LER++A +YHK+KFF+R+K  RR+AQV ++L+G  +   + +LE   +    DL YVL++PK KKY+ L      PP  ++  +   + A E  E       +E + K+V
Sbjct:   44 PTSHPSSSNAVPGVQKIKAALRQTRRLLAKDKLAADVRVATERRLKALEGELAQAEQARLERTMATRYHKIKFFERQKITRRIAQVKKQLEGATEKKEQRKLEARLEELRVDLNYVLHYPKTKKYISL-----FPPEVRQGGKNAEQVAREEKEKTETDRQREEVRKWV 207          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A4Q9PE18_9APHY (rRNA-processing protein EFG1 n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9PE18_9APHY)

HSP 1 Score: 78.6 bits (192), Expect = 5.000e-12
Identity = 59/158 (37.34%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  116 SSKTKAPSV---KNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDV--------RLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERLLKAALERGEA 262
            SS T  P V   K  +R   RL+ +  +    R+  +++++ LE   A+ E+  +ERSLA +YHK+KFF+R+K LR++AQV R+LKGD +D          R +LE+       DL YVL++PK KKY+ L      PP  +K  E   +   E+G+A
Sbjct:  112 SSPTALPGVQKIKAALRQTRRLLAKDSLAANVRVKTERRLKSLEADLAKAEQARVERSLAARYHKVKFFERQKLLRKIAQVKRQLKGDGEDGEGETLGKKERKKLEKRLGELRVDLNYVLHYPKTKKYISL-----FPPEVRKGEEAEAETVDEKGKA 264          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A7S1CB15_9STRA (rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB15_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.760e-12
Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 0
Query:  120 KAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHERLLKAA 256
            K PS+KNR+RS+ RL+N P +  + R   ++ +  LE K AE  + E ER +A +YHK+KFF+R+K +RR+A+    L      + R       +  E DL+Y+ ++P+ +KYV L   +    +A     R+ +AA
Sbjct:    8 KTPSLKNRMRSVRRLLNNPKLTGQARKDKERLLRRLEAKLAEGAQGERERKIARRYHKVKFFERKKVVRRIARAQAALAAADSAEAREAASTELKRHEADLEYITWYPRHEKYVALFPKQRDDAKAAAKRARMREAA 144          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A7S2RJF1_9STRA (rRNA-processing protein EFG1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJF1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 9.870e-12
Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 0
Query:  117 SKTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLK--GDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPL 235
            +K K PS KN+IRSL RL+++  +  E R S++ ++ EL  +  ++++ +LER  A +YHK+KFF+RRK +RRL  V ++L    D  +   L+ E  R  E  D+ YV YFP DKKY+ L
Sbjct:    8 TKKKTPSRKNQIRSLRRLLSKEDLDAELRKSIESKLGELGEQVVDKQQEDLERKRAQRYHKVKFFERRKLMRRLEAVKKQLSKAADTSEVTTLKDELVRLDE--DMTYVRYFPNDKKYISL 126          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A485LEQ6_9STRA (rRNA-processing protein EFG1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEQ6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.450e-11
Identity = 40/118 (33.90%), Postives = 81/118 (68.64%), Query Frame = 0
Query:  118 KTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPL 235
            K K PS+KN+IR+L R + +  + ++ R + +++++ L+ +T +++  +  R +A+KY K+KFFDRR+ +R L ++ R+++    DD + +LE+  QS + D+ +V ++PK++KY+ L
Sbjct:   20 KKKTPSLKNKIRNLERFLKKDSLPDDVRQAKEEELKTLQAQTEDKQVEDKSREIALKYKKVKFFDRRRLMRTLKKLKRQIETS-DDDAKADLEKQYQSAKEDMMFVYFYPKNEKYINL 136          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A7R9TMB4_MICPS (rRNA-processing protein EFG1 (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TMB4_MICPS)

HSP 1 Score: 74.3 bits (181), Expect = 1.840e-11
Identity = 53/137 (38.69%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  110 GPVPSKSSKTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDD-VRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRA 245
            GPV  K      PS KN++RS+ RL+ R G+ E+ R    +Q+E L+    E ++ E ER L+++YHK+KFF+R K  R + ++ R      + D V  EL+Q ++    DL YV++FPK  KYV + K K+  P A
Sbjct:   22 GPVTKKK-----PSTKNQMRSIQRLLKREGLPEKARAEKARQLEALDAIAEENKRAERERKLSVRYHKVKFFERVKLTRAMEKLERDNPAATRSDAVAEELKQLKE----DLHYVMHFPKGYKYVSVLKNKDETPEA 149          
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Match: A0A5C2S2T7_9APHY (rRNA-processing protein EFG1 n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2S2T7_9APHY)

HSP 1 Score: 75.1 bits (183), Expect = 5.290e-11
Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 0
Query:  112 VPSKSSKTKAPSV---KNRIRSLTRLMNRPGIVEEQRLSLKKQVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGDIQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPL 235
             P  SS    P V   K  +R   RL+ +  +  + R++ +++++ LE   A  E+  LER+LA +YHK+KFF+R+K  RR+AQ+ ++L  D +   R +LE   Q    DL YVL++PK KKY+ L
Sbjct:   81 TPDSSSSNVLPGVQKIKAALRQTRRLLAKDTLAADVRVATERRLKALEADLARAEQARLERTLATRYHKVKFFERQKIARRIAQIAKQLAADPEKKERRKLEARLQELRVDLNYVLHYPKTKKYISL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig995.17646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAU6_ECTSI1.100e-9162.04rRNA-processing protein EFG1 n=1 Tax=Ectocarpus si... [more]
Q015G9_OSTTA1.780e-1338.85rRNA-processing protein EFG1 n=2 Tax=Ostreococcus ... [more]
R7SXP4_DICSQ9.250e-1337.34rRNA-processing protein EFG1 n=1 Tax=Dichomitus sq... [more]
A0A371CMD6_9APHY2.810e-1232.54rRNA-processing protein EFG1 n=2 Tax=Polyporus Tax... [more]
A0A4Q9PE18_9APHY5.000e-1237.34rRNA-processing protein EFG1 n=3 Tax=Dichomitus sq... [more]
A0A7S1CB15_9STRA6.760e-1235.04rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bi... [more]
A0A7S2RJF1_9STRA9.870e-1242.15rRNA-processing protein EFG1 n=1 Tax=Rhizochromuli... [more]
A0A485LEQ6_9STRA1.450e-1133.90rRNA-processing protein EFG1 n=1 Tax=Aphanomyces s... [more]
A0A7R9TMB4_MICPS1.840e-1138.69rRNA-processing protein EFG1 (Fragment) n=1 Tax=Mi... [more]
A0A5C2S2T7_9APHY5.290e-1137.80rRNA-processing protein EFG1 n=2 Tax=Lentinus tigr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..170
NoneNo IPR availablePANTHERPTHR33911FAMILY NOT NAMEDcoord: 80..382
IPR019310rRNA-processing protein Efg1PFAMPF10153Efg1coord: 124..235
e-value: 6.2E-23
score: 81.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig995contigS-latissima_F_contig995:43517..48375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig995.17646.1mRNA_S-latissima_F_contig995.17646.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig995 43450..48375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig995.17646.1 ID=prot_S-latissima_F_contig995.17646.1|Name=mRNA_S-latissima_F_contig995.17646.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=555bp
MPHTNRARRADHFRSIDNKSNSNNSNNSNNNKSYPTAPTDNAAERNSGRT
QVHHQHDRDVDGASREPYHGRSDGRGGAGRGGGGRRQEATAGRGFGRGGR
EGTGGRGARGPVPSKSSKTKAPSVKNRIRSLTRLMNRPGIVEEQRLSLKK
QVEELEGKTAEREKHELERSLAIKYHKLKFFDRRKALRRLAQVHRKLKGD
IQDDVRLELEQTRQSEETDLKYVLYFPKDKKYVPLEKGKEGPPRAQKSHE
RLLKAALERGEAAGWAEFQENLEKFVSGDRGRKKRDNVAAVEGEAAGGEG
GEPSVKRKKGLDGLAVVAQEKLWDDEEEAVEGEGEEGHAGGGREGGKDSS
STDGESGEEDSGSEGGGGREAKKGRPRKSKKRKKKTTTPVLAPDGAGSSR
STESDSEGGLSGDEGFGAAASDEDDAYSFAEARMRWASGGGAGGGTASAA
AATTGGDSSSDDGSSAGAEATDGKAARDGLGGDVSANGPGVTSDGSESGD
SVGDIYVGGRTEGARSVSGPGRSSDRSDGSERPSSGENEGLDGDSDDGSD
EDSDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019310Efg1