prot_S-latissima_F_contig995.17644.1 (polypeptide) Saccharina latissima SLPER63f female
|
Overview
Homology
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE) HSP 1 Score: 248 bits (632), Expect = 1.290e-78 Identity = 139/211 (65.88%), Postives = 160/211 (75.83%), Query Frame = 0
Query: 1 MAAEEAKVVGSMPPPPAYYKLFAPGAAGPESNGELELATAPAAXXXXXXXXXXXXXXXXAAGASNAFPLEPPPPPGPSDTYKMFGMPYSSEPIAEELLPPEKMVVPPSDQSIDFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQAEENAEVMSSLEAAMLECASAQNRAKACLSL 211
MA EEAKVV ++PPPPAYYKLF+PGA+ G+ A+A A A N FPL+PP PPGP +TY+MFGMPYSSEP+ +ELLPPEK+VVP S Q+IDFR LK LLNSIMANYGQFMEMLVSSP+ AHEKLSDVETLFVNFH+LLNRYRAHQARH++L+RLR QAEEN VMS+LEAAM +C SAQ A +CL L
Sbjct: 1 MATEEAKVVDAVPPPPAYYKLFSPGAS---LTGQDVGASAAIAAPGDSAGGAGGT-------APNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCLGL 201
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.670e-60 Identity = 111/160 (69.38%), Postives = 128/160 (80.00%), Query Frame = 0
Query: 83 MFGMPYSSEPIAEELLPPEKMVVPPSDQSIDFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQAEENAEVMSSLEAAMLECASAQNRAKACLSLS-NGAVGDA------AREAGDPMDLADVLAG 235
MFGMPYSSEP+ +ELLPPEK+VVP S Q+IDFR ELK LLNSIMANYGQFMEMLVSSP+ AHEKLSDVETLFVNFH+LLNRYRAHQARH++L+RLR QA+EN VMS+LEAAM +C SAQ A +CL L NGA G A AR+ MD+ + + G
Sbjct: 1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGG 160
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.510e-23 Identity = 53/123 (43.09%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 74 PPGPSDTYKMFGMPYSSEPIAEELLPPEKMVVPPSDQ-SIDFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQAEENAEVMSSLEAAM 195
PP P +Y FG+PYS+E L+P EK + P D +FR E++ LL SIMANY Q +++L+ PS K+ ++E LFVNFH++LN++R HQAR ++L RL++Q ++ + ++ LE+ M
Sbjct: 31 PPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQM 153
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.060e-20 Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = 0
Query: 7 KVVGSMPPPPAYYKLFAPGAAGPESNGELELATAPAAXXXXXXXXXXXXXXXXAAGASNAFPLEPPPPPGPSDTYKMFGMPYSSEPIAEELLPPEKMVV--------PPSDQSIDFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQAEENAEVMSSLEAAMLECASAQNRAKACLSLSN 213
++V PPPPA++ L+ +++ APA PP P P+ Y MFG PYS++ + +LLP + + P+ Q+ID++ +LK L S++AN Q +++L+ +P +EK+ D+E LFVN H L+N++R HQAR +I+Q LR Q EE ++ + ++E RA + L + N
Sbjct: 11 EIVSEFPPPPAFFSLY-----------QIDDVNAPA----------------------------PPAPMAPN--YHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIESREQVERAHSALDVDN 184
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A835YZG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.500e-12 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 0
Query: 1 MAAEEAKVVGSMPPPPAYYKLFAPG--AAGPESNG---ELELATAPAAXXXXXXXXXXXXXXXXAAGASNAFPLEPPPPPGPSDTYKMFGMPYSSEPIAEELLPPEKMV--VPP-------SDQSIDFRVELKALLNSIMANYGQFMEMLVSSPS-HAHEKLSDVE 151
+ AEE KVV ++P PPAYYKLFA AAG E + +L+ +PAA AA A LEPPP P Y M+G Y + E LLP E+++ PP SD +++F+ E++ LL+S+MANY Q +++L+ SPS HA + + +++
Sbjct: 72 LMAEETKVVSALPLPPAYYKLFAKRSEAAGAEDSTPAKDLDAQKSPAA----------------AADAEINL-LEPPPLPSVGGAYNMYGTAYKVDFELEYLLPREQILFGAPPEGTASSSSDLNLNFKDEMRRLLDSVMANYAQLLDVLMRSPSLHAQKAVLELQ 220
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A261Y1E2_9FUNG (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1E2_9FUNG) HSP 1 Score: 68.6 bits (166), Expect = 3.980e-10 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 0
Query: 69 LEPPPPPGPSDTYKMFG--------MPYSSEPIAEELLPPEKMVVPPSDQSIDFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQAEENAEVMSSLEA 193
LEPP P +Y +F +P SE E+L P D ID ELK L +S++ NY Q +++LV +P K+ + T+F+N H L+N YR HQAR +++ ++QQ E + LEA
Sbjct: 67 LEPPKPTFEDGSYSLFNQTWQIEDKLPSLSEMDVEQLYP---------DGPIDRIKELKKLNHSLVINYLQLLDLLVKNPQQFDTKVQHLRTIFINMHHLINEYRPHQAREILILLMQQQVERKRKATEQLEA 190
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: L8GHV0_ACACA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GHV0_ACACA) HSP 1 Score: 65.9 bits (159), Expect = 3.500e-9 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 80 TYKMFGMPYSSEPIAEELLP-PEKMVVPPSDQSIDFRVELKALLNSIMANYGQFMEMLVSSPSHA--HEKLSDVETLFVNFHTLLNRYRAHQARHLILQRLRQQ 180
TY MFG P +++ + + L P ++ + P + I+ R ELK L +SI+ NY + + LV++P H+K++D+E LFVN H LLN +R HQAR ++ L +Q
Sbjct: 41 TYSMFGRPLATQEVEDSLENHPGRVQLYPRGE-INHRRELKKLNHSILHNYLELLNTLVTNPHEYTFHDKVADLEQLFVNLHFLLNAFRPHQARETLISILAEQ 143
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A5M9JAI2_MONFR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9JAI2_MONFR) HSP 1 Score: 62.8 bits (151), Expect = 5.960e-8 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0
Query: 69 LEPPPPPGPSDTYKMFGMPYSSE---PIAEELLPPEKMVVPPSDQSI-----DFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLIL 174
L+PP PP S +Y+ G + + P EE E++ PP + D + LK + S++ NY + + ++ +P +HEK+SD+ TLFVNFH LLN YR HQAR ++
Sbjct: 72 LQPPEPPT-SGSYRTLGQIHKIKDELPTLEES-EVERLYTPPDTPTGTGTHGDRALILKRIAKSLLLNYLELVGIMSINPEQSHEKISDLNTLFVNFHHLLNEYRPHQARESLI 183
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A5M9J856_MONFR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9J856_MONFR) HSP 1 Score: 62.8 bits (151), Expect = 8.110e-8 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0
Query: 69 LEPPPPPGPSDTYKMFGMPYSSE---PIAEELLPPEKMVVPPSDQSI-----DFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLIL 174
L+PP PP S +Y+ G + + P EE E++ PP + D + LK + S++ NY + + ++ +P +HEK+SD+ TLFVNFH LLN YR HQAR ++
Sbjct: 72 LQPPEPPT-SGSYRTLGQIHKIKDELPTLEES-EVERLYTPPDTPTGTGTHGDRALILKRIAKSLLLNYLELVGIMSINPEQSHEKISDLNTLFVNFHHLLNEYRPHQARESLI 183
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Match: A0A5N6JY34_MONLA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Monilinia laxa TaxID=61186 RepID=A0A5N6JY34_MONLA) HSP 1 Score: 62.8 bits (151), Expect = 9.740e-8 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0
Query: 69 LEPPPPPGPSDTYKMFGMPYSSE---PIAEELLPPEKMVVPPSDQSI-----DFRVELKALLNSIMANYGQFMEMLVSSPSHAHEKLSDVETLFVNFHTLLNRYRAHQARHLIL 174
L+PP PP S +Y+ G + + P EE E++ PP + D + LK + S++ NY + + ++ +P +HEK+SD+ TLFVNFH LLN YR HQAR ++
Sbjct: 72 LQPPEPPT-SGSYRTLGQIHKIKDELPTLEES-EVERLYTPPDTPTGTGTHGDRALILKRIAKSLLLNYLELVGIMSINPEQSHEKISDLNTLFVNFHHLLNEYRPHQARESLI 183 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig995.17644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 19
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-latissima_F_contig995.17644.1 ID=prot_S-latissima_F_contig995.17644.1|Name=mRNA_S-latissima_F_contig995.17644.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=251bpback to top |