prot_S-latissima_F_contig994.17636.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig994.17636.1
Unique Nameprot_S-latissima_F_contig994.17636.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length567
Homology
BLAST of mRNA_S-latissima_F_contig994.17636.1 vs. uniprot
Match: A0A6H5KNI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI1_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 9.230e-74
Identity = 260/560 (46.43%), Postives = 292/560 (52.14%), Query Frame = 0
Query:   13 RAEMG-TGQQ-REDYLDKAQDHLTSGIAILRGVMARQESAAAGRDGSA-ADLVVVGESQLPVAIMRQHQSPWLAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPERLQPRQRA---------RRRRGSRDESEDPATAMSVVSEQLWGLQQKLVGTYVAAARARLGRAFPGPSITTSERSFPSLSNGKQSRRSGGXXXXXXXXXXXSLRGTAGKGDQMPPGPARGDFE---------------------------------DGPDEETCAELVRLALDSLRNAWEHLKDATVTLDRRSAAVFPSNGAGVGGDGTETTDDDQS------VDISETGLLSQGGVARPDGARPKDNTRFNSTPERGQRANGREEPSEGLGPLWKGSLSEALARSGSAGGEGDGAGHDSIGMDGEEAPTLVGDAAGAVDAFGGVSASKLGDVGDAMGCLAWNRSARRQLEARRAELFELCGDVAHACVVLRA---------GAATGSGAAGATLGRGGAPAPSVTRTEPKGSLLDRLEGLLSAACPPLALKDLDVCQDLHGHVLEALS 512
            RA+M  TG++ RE+ LD+AQDHLTSGIAIL GVMARQESAAAGRD SA AD+V+VGE + PVAIMRQ ++PW+ V DEXXXXXXXXXXXXXXXXXXX         S      Q RQR           RRRGS DES DPATA+SVVSEQLWGLQQKLVGTYVA ARARL RAFP P +  +    P+            XXXXXXXXXXX                                                       DGPD+ET AELV+ ALDSL  AWE+L +A VTLDRRS+A   + G     DG   + +DQ        D  +                                     + +E LGPLWKGSLSEALAR             DS             DAA   D             GD MG LAW R+ARRQLEARRAELFELCGDVAHACV LRA          AA   G AG T G GG+       TE +  L  RL+ LLS+A PPLAL DL+VC  LHG V EALS
Sbjct:  760 RADMDETGERAREENLDRAQDHLTSGIAILHGVMARQESAAAGRDDSATADVVIVGERKRPVAIMRQQRNPWVTVADEXXXXXXXXXXXXXXXXXXXPGMQDGGQGSR-----QQRQRLGQXXXXXXXXRRRGSLDESGDPATALSVVSEQLWGLQQKLVGTYVAVARARLRRAFPDPPLVAAGSDGPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPDDETRAELVQGALDSLCAAWENLAEAKVTLDRRSSAAVVAVG-----DGDNDSQNDQEDRHGDDYDEGQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAEQLGPLWKGSLSEALAR-------------DSR------------DAAAVAD-------------GDVMGRLAWTRAARRQLEARRAELFELCGDVAHACVSLRAKAVGVGIATAAAAAEGPAGPTTGEGGS-------TEAQRGLSARLQELLSSASPPLALGDLNVCGGLHGRVWEALS 1264          
BLAST of mRNA_S-latissima_F_contig994.17636.1 vs. uniprot
Match: D8LR51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR51_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 8.210e-43
Identity = 193/524 (36.83%), Postives = 227/524 (43.32%), Query Frame = 0
Query:   13 RAEMG-TGQ-QREDYLDKAQDHLTSGIAILRGVMARQESAAAGRDGSA-ADLVVVGESQLPVAIMRQHQSPWLAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPERLQPRQRARRRRGSRDESEDPATAMSVVSEQLWGLQQKLVGTYVAAARARLGRAFPGPSITTSERSFPSLSNGKQSRRSGGXXXXXXXXXXXSLRGTAGKGDQMPPGPARGDFE---DGPDEETCAELVRLALDSLRNAWEHLKDATVTLDRRSAAVFPSNGAGVGGDGTETTDDDQSVDISETGLLSQGGVARPDGARPKDNTRFNSTP-----------ERGQRANGREEPSEGLGPLWKGSLSEALARSGSAGGEGDGAGHDSIGMDGEEAPTLVGDAAGAVDAFGGVSASKLGDVGDAMGCLAWNRSARRQLEARRAELFELCGDVAHACVVLRAGAATGSGAA-------GATLGRGGAPAPSVTRTEPKGSLLDRLEGLLSAACPPLALKDLDVCQDLHGHVLEALS 512
            RA+M  TG+ +RE+ LD+AQDHLTSGIAIL GVMARQESAAAGRD SA AD+V+VGE + PVAIMRQ ++PW+AVDDE                                             G   +            E   G+Q    G         LGR                            XXXXXXXXXXX                         DGPD+ET AELVR ALDSL  AWE+L +A VTLDRRS+A   +                           +        G  P +                    R +R   +++ +E LGPLWKGSLSEALAR                  D  +A      AA A D             GD MG LAW R+ARRQLEARRAELFELCGDVAHACV LRA A              G + G GG+        E +  L  RL+ LLS+A PPL L DL+VC  LHG V E L+
Sbjct:  635 RADMDETGEREREENLDRAQDHLTSGIAILHGVMARQESAAAGRDDSATADVVIVGERKRPVAIMRQQRNPWVAVDDE---------------------------------------------GDDTDYSSSCEVEPAEDEGPPGMQDVGQGGRQXXXXXXLGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPDDETRAELVRGALDSLCAAWENLAEAKVTLDRRSSAAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXEAWAXXXXXXGDGPSEGXXXXXXXXXXXXXXXXXXRRWRRR--QDDRAEELGPLWKGSLSEALAR------------------DSRDA------AAAAAD-------------GDVMGRLAWTRAARRQLEARRAELFELCGDVAHACVSLRAKAVXXXXXXXXXXXXXGPSTGEGGSK-------EAQRGLSARLQELLSSASPPLVLGDLNVCGGLHGRVWETLT 1067          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig994.17636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNI1_9PHAE9.230e-7446.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR51_ECTSI8.210e-4336.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig994contigS-latissima_F_contig994:29696..31889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig994.17636.1mRNA_S-latissima_F_contig994.17636.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig994 29696..31889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig994.17636.1 ID=prot_S-latissima_F_contig994.17636.1|Name=mRNA_S-latissima_F_contig994.17636.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=567bp
AAAAAASAEGDERAEMGTGQQREDYLDKAQDHLTSGIAILRGVMARQESA
AAGRDGSAADLVVVGESQLPVAIMRQHQSPWLAVDDEDDDDEDGNTGRGE
EHQGGGGSGGGGGGGSALPERLQPRQRARRRRGSRDESEDPATAMSVVSE
QLWGLQQKLVGTYVAAARARLGRAFPGPSITTSERSFPSLSNGKQSRRSG
GSGTGGSGGGGGSLRGTAGKGDQMPPGPARGDFEDGPDEETCAELVRLAL
DSLRNAWEHLKDATVTLDRRSAAVFPSNGAGVGGDGTETTDDDQSVDISE
TGLLSQGGVARPDGARPKDNTRFNSTPERGQRANGREEPSEGLGPLWKGS
LSEALARSGSAGGEGDGAGHDSIGMDGEEAPTLVGDAAGAVDAFGGVSAS
KLGDVGDAMGCLAWNRSARRQLEARRAELFELCGDVAHACVVLRAGAATG
SGAAGATLGRGGAPAPSVTRTEPKGSLLDRLEGLLSAACPPLALKDLDVC
QDLHGHVLEALSGKNDHRNTNAAGSKKSRAAQGLGDCRGPESPGGRPKRG
GKRRRRRRRGWTAGRL*
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