prot_S-latissima_F_contig990.17614.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig990.17614.1
Unique Nameprot_S-latissima_F_contig990.17614.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length307
Homology
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A6H5L0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V0_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.250e-110
Identity = 177/269 (65.80%), Postives = 198/269 (73.61%), Query Frame = 0
Query:    7 RYFATCILIACWSCQPCLGFLGSLPHSAAVGRVHQQRSFRKHEHVPVSTSAKRRDHGHGSGATTRHRASSPGSLGMVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSKGGG 275
            R+   C L+ACWSCQ C GF+ S   SA +  V  ++   KH++  +  S                     G   M AAP +LW SYL ALETAPLLTKSITAG IFPAADA AQ FD +KG ++         D +RTLRWLFFGFAVQAPWNHFFYV LDGALPPTPDPLSTTTA+K++IDQFVQAPIFT+VIFGVLGLLEGK+  DIREQLD+DYKSTMLANWGVFVPAA VNLAFCPPELRVLFLNVVFF WTI+LSTVVSKG G
Sbjct:   24 RFITACTLLACWSCQRCSGFVCSPLRSALLSPVGMKQH--KHDNRSIRRS---------------------GVTRMAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADAVAQRFD-TKGQDDGEVQ--QQLDIARTLRWLFFGFAVQAPWNHFFYVFLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLDQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPG 266          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: D7FP55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP55_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 5.210e-104
Identity = 156/194 (80.41%), Postives = 169/194 (87.11%), Query Frame = 0
Query:   82 MVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSKGGG 275
            M AAP +LW SYL ALETAPLLTKSITAG IFPAAD+ AQ FD  KG ++        WD +RTLRWLFFGFAVQAPWNHFFYV LDGALPPTPDPLSTTTA+K++IDQFVQAPIFT+VIFGVLGLLEGK+  DIREQL++DYKSTMLANWGVFVPAA VNLAFCPPELRVLFLNVVFF WTI+LSTVVSKG G
Sbjct:    1 MAAAPTELWDSYLHALETAPLLTKSITAGCIFPAADSVAQWFDN-KGQDDGELQ--QQWDIARTLRWLFFGFAVQAPWNHFFYVLLDGALPPTPDPLSTTTAVKVLIDQFVQAPIFTVVIFGVLGLLEGKAVADIREQLNQDYKSTMLANWGVFVPAAVVNLAFCPPELRVLFLNVVFFGWTIFLSTVVSKGPG 191          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S3PZB9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB9_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.400e-72
Identity = 117/194 (60.31%), Postives = 143/194 (73.71%), Query Frame = 0
Query:   81 GMVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSKGG 274
            G+  +  + W SY  ALE  PLLTKSITAGVI  AAD   Q  ++S  GE++        D++R  R+ FFGF +QAPWNHF+Y+ LDGALPPT DPLS TT IK+VIDQFVQAPIFT++IF  LGLLEGKS  D++EQLD+DYK TM ANW ++VPA  VN+AFCPP LRVLFLN VFF W+I+LS  ++  G
Sbjct:   66 GVTDSLVNAWTSYNIALEEDPLLTKSITAGVILGAADFAGQALERSNSGEDNPV------DYARAARFAFFGFILQAPWNHFYYLFLDGALPPTEDPLSATTGIKVVIDQFVQAPIFTVIIFFFLGLLEGKSASDVKEQLDRDYKDTMFANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNSDG 253          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S0BVQ8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVQ8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.760e-70
Identity = 116/192 (60.42%), Postives = 142/192 (73.96%), Query Frame = 0
Query:   82 MVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFD-KSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSK 272
            +  + +DLW SY  ALET PL+TKSITAGVI  AAD   Q  + K+K   E +     S DF R  R+ FFGF +QAPWNHF+Y+ LDGALPPT DPL+ TT IK+VIDQFVQAPIFT++IF  LGLLEGK+   I +QL+ DYK+TM+ANW ++VPA  VN+AFCPP  RVLFLN VFF W+IYLS  ++K
Sbjct:   76 IATSASDLWTSYNSALETDPLITKSITAGVILGAADFAGQALEAKTKESSEET-----SIDFGRAARFAFFGFILQAPWNHFYYLLLDGALPPTDDPLTATTGIKVVIDQFVQAPIFTVIIFVFLGLLEGKNIESINKQLENDYKNTMVANWKLWVPATAVNIAFCPPLFRVLFLNCVFFFWSIYLSLTLNK 262          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: B8BXV6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV6_THAPS)

HSP 1 Score: 223 bits (568), Expect = 1.750e-69
Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 0
Query:   88 DLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKS---KGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSK 272
            ++W SYL ALE+ PLL KS+TAGVI  AAD + Q   +S      ++++    +  D +R LR+ FFGF +QAPWNHF+Y+ LDGALPPTPDP + TT IK+++DQF+QAPIFT++IF  LG LEGK+  +I++QLD DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+I+LS  ++K
Sbjct:    4 EVWTSYLNALESDPLLVKSVTAGVILGAADLSGQAIQQSLAKANSDDATTITDSGVDIARFLRFAFFGFILQAPWNHFYYLLLDGALPPTPDPFTATTGIKVLVDQFIQAPIFTVIIFAFLGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 191          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S2W2E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2E8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.820e-69
Identity = 115/187 (61.50%), Postives = 140/187 (74.87%), Query Frame = 0
Query:   88 DLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKS--KGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSK 272
            + W SY  ALET PLLTKSITAGVI  AAD   Q  ++S  K GEESS     S D +R +R+ FFG  +QAPWNHF+Y  LDGALPPT DP +TTT IK+ IDQFVQAP+FT++IF  LGLLEGK+   +++QLD DYK TM+ANW ++VPA  VN+AFCPP LRVLFLN VFF W+I+LS  ++K
Sbjct:   55 EAWVSYNHALETDPLLTKSITAGVILGAADLAGQALERSQKKEGEESS-----SVDLARAVRFAFFGLVLQAPWNHFYYQLLDGALPPTADPFTTTTGIKVAIDQFVQAPVFTVLIFYFLGLLEGKTMESVKQQLDNDYKDTMIANWKLWVPATAVNIAFCPPLLRVLFLNCVFFFWSIFLSLKLNK 236          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S2XVN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 9.700e-69
Identity = 113/202 (55.94%), Postives = 147/202 (72.77%), Query Frame = 0
Query:   73 RASSPGSLGMVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGAS--WDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSK 272
            + ++P  +  ++  + LW SYL ALE+ PL+TKSITA  I PAAD +AQL +K K  +E S     S   D +R LR+  FG  +QAPWNHF+Y+ LD A+PPT D  +TTTA+K+ IDQFVQAP+FT++IF  LGLLEGK+   IR QL  DY ST+ ANW ++VPAAT NLAFCPP+LRVLF N+VFF W+I++S VV+K
Sbjct:   38 KTTTPRMMADISGVSSLWDSYLAALESQPLITKSITAAAILPAADFSAQLLEKQKETDEKSIDSKESDGIDAARVLRFSIFGLLLQAPWNHFYYLYLDSAIPPTEDAFTTTTAVKVFIDQFVQAPVFTVLIFVALGLLEGKALSSIRTQLKDDYWSTLQANWKLWVPAATFNLAFCPPQLRVLFTNLVFFFWSIFISLVVNK 239          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A448ZQP0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQP0_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.420e-68
Identity = 115/205 (56.10%), Postives = 143/205 (69.76%), Query Frame = 0
Query:   73 RASSPGSLGMVAA-PADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSKGGGG 276
            R+ SPG+ G+ A  P   W +Y  ALET PLL KS TAGVI  AAD   Q  + +K   ++    G   D  RT R+ FFGF +QAPWNHF+Y+ LDGA+PPT DP + TTA+K VIDQFVQAP FT++IF  LGLLEGK+   IR+QL+ DY  TM+ANW ++VPA  VNLAF PP LRVL+LN VFF W+I+LS  ++K G G
Sbjct:   39 RSGSPGTTGLAALDPQQAWEAYNAALETDPLLVKSATAGVILGAADLAGQAIEGAKXDADAETDSGGI-DAGRTARFAFFGFVLQAPWNHFYYLFLDGAIPPTADPWTATTAVKTVIDQFVQAPXFTVLIFAFLGLLEGKTLQSIRKQLEDDYADTMVANWKLWVPATVVNLAFVPPLLRVLYLNCVFFFWSIFLSLKLNKDGSG 242          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S1YNW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YNW0_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.500e-68
Identity = 113/192 (58.85%), Postives = 142/192 (73.96%), Query Frame = 0
Query:   88 DLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEE-------SSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSK 272
            + W+SYL ALE  PLL KSITAGVI  AAD + Q   ++            ++ +   S D +R LR+ FFGF +QAPWNHF+Y  LDGALPPT DP ++TTAIK++IDQF+QAPIFT++IFG LG+LEGKS   I+EQLD+DY  TMLANW ++VPA  VN+AFCPP LRVLFLNVVFF W+I+LS  ++K
Sbjct:   80 EAWNSYLDALEANPLLVKSITAGVILGAADLSGQALQQAIATNNDDNMELSTNNNNSNSVDIARFLRFAFFGFILQAPWNHFYYQILDGALPPTEDPFTSTTAIKVIIDQFIQAPIFTVIIFGFLGVLEGKSLDSIKEQLDEDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNK 271          
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Match: A0A7S4EG90_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG90_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.530e-68
Identity = 113/205 (55.12%), Postives = 147/205 (71.71%), Query Frame = 0
Query:   70 TRHRASSPGSLGMVAAPADLWHSYLGALETAPLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLFFGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIVIFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPELRVLFLNVVFFAWTIYLSTVVSKGG 274
            TR  +++  S  +   P   W +Y  ALET+PLL KS+TAGVI  AAD   Q F+ ++  +ESS S     D +RT+R+ FFGF +QAPWNHF+Y  LDGA+PPT DP ++TTA+K VIDQFVQAPIFT++IF  LG LEGK+   I++QLD DY  TM+ANW ++VPA  +NLAF PP LRVL+LN VFF W+I+LS  ++K G
Sbjct:   23 TRSVSATTSSSSLHMDPQQAWTAYNDALETSPLLVKSVTAGVILGAADLAGQAFEGAQSDDESS-SNDTGIDVARTVRFAFFGFILQAPWNHFYYTLLDGAIPPTVDPWTSTTAVKTVIDQFVQAPIFTVLIFAFLGFLEGKNLEAIKKQLDDDYADTMVANWKLWVPATVINLAFVPPILRVLYLNCVFFFWSIFLSLKLNKDG 226          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig990.17614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V0_9PHAE1.250e-11065.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP55_ECTSI5.210e-10480.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3PZB9_9STRA2.400e-7260.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0BVQ8_9STRA7.760e-7060.42Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
B8BXV6_THAPS1.750e-6957.45Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2W2E8_9STRA2.820e-6961.50Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XVN5_9STRA9.700e-6955.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A448ZQP0_9STRA1.420e-6856.10Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1YNW0_9STRA1.500e-6858.85Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4EG90_9STRA3.530e-6855.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 206..267
e-value: 2.4E-19
score: 69.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 84..274
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 84..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 246..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..306
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.664
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 228..247
NoneNo IPR availableTMHMMTMhelixcoord: 252..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig990contigS-latissima_F_contig990:85519..96699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig990.17614.1mRNA_S-latissima_F_contig990.17614.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig990 85038..96738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig990.17614.1 ID=prot_S-latissima_F_contig990.17614.1|Name=mRNA_S-latissima_F_contig990.17614.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=307bp
MTSQRHRYFATCILIACWSCQPCLGFLGSLPHSAAVGRVHQQRSFRKHEH
VPVSTSAKRRDHGHGSGATTRHRASSPGSLGMVAAPADLWHSYLGALETA
PLLTKSITAGVIFPAADATAQLFDKSKGGEESSASGGASWDFSRTLRWLF
FGFAVQAPWNHFFYVALDGALPPTPDPLSTTTAIKLVIDQFVQAPIFTIV
IFGVLGLLEGKSTGDIREQLDKDYKSTMLANWGVFVPAATVNLAFCPPEL
RVLFLNVVFFAWTIYLSTVVSKGGGGRRPKKPEINRPSFGASRAQGMWRS
ATGDHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22