prot_S-latissima_F_contig990.17613.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig990.17613.1
Unique Nameprot_S-latissima_F_contig990.17613.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length894
Homology
BLAST of mRNA_S-latissima_F_contig990.17613.1 vs. uniprot
Match: D7FP56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP56_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 2.570e-42
Identity = 221/677 (32.64%), Postives = 269/677 (39.73%), Query Frame = 0
Query:  284 AAYHSATAVNNGKRVVFIGG-RDWG-SSVFLLDAVGLKWSSVDVSG----LPERCLHTAISVADIRAESSRTEDERQHEKQXXEEGSSGALDAPTP-----------QQXXXXXXXVAVPTVQLWDPAAAA------------------------------------NSRD-DAGEGKIGAGGVGGGLGQSGEXXGGDHQDGGPS-FENILIFGGI-GASAVSG----DATVLRVDGTVAPMPLARKSSTPPDPRYNHAMVSVEDGQKVFLFGGFRGDGTGLEDAFLLDLASPVGEVDAGSEEEEKEDGIEDEAVQTESTVTFGDGDIYTGQLDEDGRRQGQGRCEYAGVGGGREXXXXXXXXSGSWDDDKPHGEGERLYPXXXXXXXXXXXXXXXXXXXXXXVVAAAAFGLGCPPVVSYRGGWKRGVRDGHGVCSFAAPVASAGATVGGVSAACCRATAPARGGVAAATAAAAVPVKYEGGWVDGRPFGRGTLTLRPAARGEGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXSSIDGVWAKEGLVHGREQLPGKQGVYEGQYRLGRREGHGRLDLPDGSEYEXXXXXXXQNGIGTFRCGVTRHVYTGKWVGGVRCGKGVCQYASGSRXXXXXXXXXXXXXXVL------TSSTGDAQAGVWHRDESITLPAAAAAV 894
            AAYH+AT VN+G++VVF+GG + WG S+++LLDAVGL WSS    G      +RCLHTA+SV  +  E+S    ++ H  Q                          +         A P VQLW P + A                                    N++D D   G   + G     G+S +   GD + G P  FE+ILIFGG+ G +AVSG    DA         A +P+A K   PP PR                                                               STV       +T        R  +GR       G R            W   +      R                                         YRG +KRGVRDGHGVCSF       G +V             A GG   AT+   +P  Y+G WV GRP GRG L+LR  A       XXX                        SI+G+W +EGL  GRE+LPGK GVYEGQYRLG+REGHGRLDLPDGSE  XXXXXXX NGIGTFRCGVTRHV                       XXXXXXXXXXXXXXV           GD  AG+WHRDE ++L ++AA+V
Sbjct:   17 AAYHTATPVNDGRKVVFVGGGKSWGCSTIYLLDAVGLIWSSFQAVGGVGLSEQRCLHTAVSVTGVETENSDDGGQQPHRPQPEXXXXXXXXXXXXXXXXXXXXXXXIRGETSETSAAATPNVQLWGPVSTAAGPGSTPSTDPDNGAVSPTAKKKGGGKEGAAGSKTSNTKDADKTSGSRSSSGDDRRQGESTDCHAGDDEGGDPLVFESILIFGGVVGEAAVSGEGTGDAMASPTRREAARVPVA-KIHRPPPPRC--------------------------------------------------------------STVETSTPGSWT--------RAAKGRARDGATTGWR------------WMRQEKGQLPSR-----------------------------------------YRGDFKRGVRDGHGVCSFFTAGCGGGCSV-------------ATGGTPGATSIPTIPNSYDGEWVGGRPLGRGVLSLRVVAAAPA-XXXXXSNRYSSSVAGSGSGLAGRGGGSGGSIEGLWTEEGLARGREKLPGKGGVYEGQYRLGKREGHGRLDLPDGSEXXXXXXXXXXNGIGTFRCGVTRHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFYVPPGGAPGDGDPVAGIWHRDE-LSLVSSAASV 554          
BLAST of mRNA_S-latissima_F_contig990.17613.1 vs. uniprot
Match: A0A8K1FPG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPG8_PYTOL)

HSP 1 Score: 87.4 bits (215), Expect = 6.200e-14
Identity = 124/468 (26.50%), Postives = 187/468 (39.96%), Query Frame = 0
Query:  130 TARIGHAAVVVVHPAAAQPKIILFGGEVCIRTDGGYPKLPGVYEGTPSEPSGTLVWRALAGPPGGETKHAEVV----VPESDDGPVPM---AFHAACAA------SVRAEEAIVVHGGIGQSSELLGDLWALFPRSKPGSASHGHGGDNSETFSWERLQPEGQGPPPAAYHSATAVNNGKRVVFIGGRDWGS-----SVFLLDAVGLKWSSVDVSGL-PE---RCLHTAISVADIRAESSRTEDERQHEKQXXEEGSSGALDAPTPQQXXXXXXXVAVPTVQLWDPAAAANSRDDAGEGKIGAGGVGGGLGQSGEXXGGDHQDGGPSFENILIFGGIGASAVSGDATVLRVDGTVAPMPLARKSSTPP---DPRYNHAMVSVEDGQKVFLFGGFRGDGTGLEDAFLLDLASPVGEVDAGSEEEEKEDGIEDEAVQTESTVTFGDGDIYTGQLDEDGR-RQGQGRCEYA 571
            T RIGH+       A+    +++FGGE  I TD     LP  Y       S TL+          E   A+ V    V ++   P  +   A+H A +       S +  + +VV GG   + + L D+W L     P S             SW +L P G  P P AYHSA AV +G ++V +GGR         SVF+LD VG  W+ V ++GL P+   RC  TAIS+                      + ++G L                   +Q+  P   A+  ++                              PS   IL+FGG+  SA + D + L +         AR+   P        NHA V+  D + V+ FGG         D+     A    ++  G+ + ++ED   + A++T+    + +GD+YTG++D  G  R GQG+C YA
Sbjct:  100 TPRIGHSV------ASVAGNVVVFGGEQAIETD-----LPEQY-------STTLLSDCY------ELHLAQNVLSCSVIDTSTSPTALCARAWHTATSVHFTRPGSTKKSDGMVVLGGCDATGKFLDDVWVLVVDRDPASPE-------IVNKSWMQLSPTGNSPLPLAYHSAVAVEDGAKIVVVGGRHEAQTGMLDSVFVLDLVGNAWNQVTLTGLLPDSIARCRLTAISL------------------NVPIDETTGRL-------------------LQIKKPEPNASGSEE-------------------------ELQMPPSESRILVFGGVSESAPTTDVSRLAL--LDLEKACAREIHAPTLGLRSFMNHACVTSSDAKSVYFFGGIDPMTRQYVDSTT---AIHFWKLQPGAGDNDEEDNNAN-AIRTKP---YENGDVYTGEMDRKGEIRHGQGKCVYA 465          
BLAST of mRNA_S-latissima_F_contig990.17613.1 vs. uniprot
Match: A0A662WPP9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPP9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.990e-5
Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 0
Query:  766 EGLVHGREQLPGKQ--GVYEGQYRLGRREGHGRLDLPDGSEYEXXXXXXXQNGIGTFRCGVTRHVYTGKWVGGVRCGKGVCQYASG 849
            +G+ HGR +   +    V+ G +  GRR GHG + L DGS   XXXXXXX      F    TR  Y GKWVG VRCG+GVC YA+G
Sbjct:  502 DGVPHGRGESHHEATGDVFVGSWMAGRRSGHGVVTLRDGSXXXXXXXXXXXXXXXVFDDARTRARYDGKWVGDVRCGRGVCTYANG 587          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig990.17613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FP56_ECTSI2.570e-4232.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1FPG8_PYTOL6.200e-1426.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WPP9_9STRA2.990e-548.84Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 339..359
NoneNo IPR availableGENE3D2.20.110.10coord: 783..892
e-value: 4.7E-14
score: 54.4
NoneNo IPR availablePFAMPF13418Kelch_4coord: 477..515
e-value: 2.3E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR23084PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATEDcoord: 701..883
coord: 461..716
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 546..660
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 779..882
IPR003409MORN motifSMARTSM00698morncoord: 803..824
e-value: 0.24
score: 18.8
coord: 700..721
e-value: 2.7
score: 10.9
coord: 550..572
e-value: 1.1
score: 13.8
coord: 780..801
e-value: 0.37
score: 17.3
coord: 641..662
e-value: 0.41
score: 17.0
coord: 850..871
e-value: 7.6E-4
score: 28.8
coord: 584..605
e-value: 0.2
score: 19.4
coord: 827..848
e-value: 0.0061
score: 25.8
IPR003409MORN motifPFAMPF02493MORNcoord: 643..661
e-value: 3.9E-4
score: 20.2
coord: 552..571
e-value: 3.3
score: 7.8
coord: 852..873
e-value: 2.5E-5
score: 23.9
coord: 586..607
e-value: 0.0046
score: 16.8
coord: 805..822
e-value: 0.0031
score: 17.3
coord: 782..803
e-value: 2.8E-4
score: 20.6
coord: 702..718
e-value: 0.04
score: 13.8
coord: 829..851
e-value: 1.3E-5
score: 24.8
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 430..518
e-value: 1.1E-6
score: 30.0
coord: 255..345
e-value: 1.8E-5
score: 25.9
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 208..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig990contigS-latissima_F_contig990:67550..83853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig990.17613.1mRNA_S-latissima_F_contig990.17613.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig990 67550..83853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig990.17613.1 ID=prot_S-latissima_F_contig990.17613.1|Name=mRNA_S-latissima_F_contig990.17613.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=894bp
MGVLWRRVEPSGTPSGNGAAAGGAIPCVVGNRRDTFIHHLNSVYLIGGST
TSKDGPDIALRAYSWSPSSGGPHHHGTASSEGQPDEITAPIAEGGNTTAT
AAAAAAAAAAAPAAAVLTSCKVSQAGDVPTARIGHAAVVVVHPAAAQPKI
ILFGGEVCIRTDGGYPKLPGVYEGTPSEPSGTLVWRALAGPPGGETKHAE
VVVPESDDGPVPMAFHAACAASVRAEEAIVVHGGIGQSSELLGDLWALFP
RSKPGSASHGHGGDNSETFSWERLQPEGQGPPPAAYHSATAVNNGKRVVF
IGGRDWGSSVFLLDAVGLKWSSVDVSGLPERCLHTAISVADIRAESSRTE
DERQHEKQQEEEGSSGALDAPTPQQETAAAAAVAVPTVQLWDPAAAANSR
DDAGEGKIGAGGVGGGLGQSGEGGGGDHQDGGPSFENILIFGGIGASAVS
GDATVLRVDGTVAPMPLARKSSTPPDPRYNHAMVSVEDGQKVFLFGGFRG
DGTGLEDAFLLDLASPVGEVDAGSEEEEKEDGIEDEAVQTESTVTFGDGD
IYTGQLDEDGRRQGQGRCEYAGVGGGREAGGGGGSYSGSWDDDKPHGEGE
RLYPPGGGGGGGTLNDDGDDDDDDIDVVAAAAFGLGCPPVVSYRGGWKRG
VRDGHGVCSFAAPVASAGATVGGVSAACCRATAPARGGVAAATAAAAVPV
KYEGGWVDGRPFGRGTLTLRPAARGEGGRAGGGGGNGGGRGGGGGGGGGG
SGGRGGSSIDGVWAKEGLVHGREQLPGKQGVYEGQYRLGRREGHGRLDLP
DGSEYEGAWRNGRQNGIGTFRCGVTRHVYTGKWVGGVRCGKGVCQYASGS
RYEGLWLDGLRHGEGVLTSSTGDAQAGVWHRDESITLPAAAAAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller