prot_S-latissima_F_contig990.17611.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-latissima_F_contig990.17611.1
Unique Name	prot_S-latissima_F_contig990.17611.1
Type	polypeptide
Organism	Saccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length	118

Homology

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BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 3.590e-44
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0

Query:    1 CVPISPVEATWSSCGQNGEGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            CVPISPV+ TW       +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:  168 CVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 274

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BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.470e-42
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0

Query:    1 CVPISPVEATWSSCGQNGEGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            CVPISPV+ TW       +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:  342 CVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 448

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BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.000e-42
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0

Query:    1 CVPISPVEATWSSCGQNGEGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            CVPISPV+ TW       +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:   59 CVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 165

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BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.630e-41
Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:   15 GQNGE-GSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            GQ GE G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:    4 GQKGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 103

[Close]

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.790e-39
Identity = 66/95 (69.47%), Postives = 78/95 (82.11%), Query Frame = 0

Query:   19 EGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 101

[Close]

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.870e-39
Identity = 66/95 (69.47%), Postives = 78/95 (82.11%), Query Frame = 0

Query:   19 EGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:   73 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 167

[Close]

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.670e-38
Identity = 68/102 (66.67%), Postives = 81/102 (79.41%), Query Frame = 0

Query:    1 CVPISPVEATWSSCGQNGEGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEE 102
            CVPISPV+ TW       +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EE
Sbjct: 1473 CVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 1568

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BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 6.430e-38
Identity = 66/95 (69.47%), Postives = 78/95 (82.11%), Query Frame = 0

Query:   19 EGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EEVRL  LA  TR
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 101

[Close]

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 3.920e-37
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0

Query:   19 EGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEEVRLRLLADQTR 113
            +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDLIVEPM F+R+  LG S  ++ RL EEVRL  LA  TR
Sbjct:    4 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRLGELARTTR 98

[Close]

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.580e-36
Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 0

Query:   19 EGSTMTRAELPLKLCWALMMHKSQGQTLSMAVIDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLVEE 102
            +G T  R +LPL+LCWA+ MHKSQGQTL+ AVIDLG +EACTGLTFVCLSRAKR+VDL+VEPM F+R+  LG SP ++ARL EE
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90

The following BLAST results are available for this feature:

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot

BLAST of mRNA_S-latissima_F_contig990.17611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	3.590e-44	66.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	1.470e-42	66.37	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	2.000e-42	66.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSF1_9PHAE	2.630e-41	70.00	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	2.790e-39	69.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	2.870e-39	69.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	3.670e-38	66.67	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5KN08_9PHAE	6.430e-38	69.47	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K214_9PHAE	3.920e-37	68.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFN2_9PHAE	2.580e-36	70.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 2..84
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 2..84
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-latissima_F_contig990	contig	S-latissima_F_contig990:50922..51275 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Saccharina latissima female	2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90	2022-09-16
OGS1.0 of Saccharina latissima SLPER63f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-latissima_F_contig990.17611.1	mRNA_S-latissima_F_contig990.17611.1	Saccharina latissima SLPER63f female	mRNA	S-latissima_F_contig990 50922..51275 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-latissima_F_contig990.17611.1 ID=prot_S-latissima_F_contig990.17611.1|Name=mRNA_S-latissima_F_contig990.17611.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=118bp
CVPISPVEATWSSCGQNGEGSTMTRAELPLKLCWALMMHKSQGQTLSMAV
IDLGKREACTGLTFVCLSRAKRIVDLIVEPMPFERLNKLGQSPVLRARLV
EEVRLRLLADQTRNGQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase