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Homology
BLAST of mRNA_S-latissima_F_contig99.17608.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 3.030e-6 Identity = 52/165 (31.52%), Postives = 70/165 (42.42%), Query Frame = 0
Query: 1 KHAEAEALYLRAIDIKKKMFGPDHAEVATTLNNLALLLTKHGMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRRVYSHCLRLLSIRLDERVAGRHDRSLGHTNYYSAKSLRHLQGKHVEAEAVRFRAIVIEEKVLGSDHPEVATTLDHQALLL 165
KH EAE LY R++ I ++++GPDH EVAT LNNLA LL M VR+ +S H+ S T+ + QGK+ EAE + R++ I+E+V G DHP VAT L + A LL
Sbjct: 83 KHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQIMTSV-------------------------------------VRQSHS--------------VNSHEPS---TDVLGLRQPDVAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLL 193
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002151 | Kinesin light chain | PRINTS | PR00381 | KINESINLIGHT | coord: 277..294
score: 60.0
coord: 321..341
score: 53.81
coord: 356..377
score: 34.09
coord: 190..209
score: 29.5 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 281..314
e-value: 0.11
score: 21.6
coord: 239..272
e-value: 0.027
score: 23.6
coord: 407..440
e-value: 0.0019
score: 27.4
coord: 365..398
e-value: 0.55
score: 19.3
coord: 28..61
e-value: 0.22
score: 20.6
coord: 323..356
e-value: 0.47
score: 19.5
coord: 197..230
e-value: 0.0054
score: 25.9
coord: 155..188
e-value: 130.0
score: 5.3 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 239..272
score: 6.815 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 407..440
score: 10.974 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 28..61
score: 5.576 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 365..398
score: 7.08 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 281..314
score: 6.608 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 197..230
score: 7.051 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 323..356
score: 7.198 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 268..317
e-value: 7.7E-12
score: 47.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 99..267
e-value: 4.5E-51
score: 175.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 318..451
e-value: 1.9E-47
score: 163.7
coord: 1..98
e-value: 2.4E-26
score: 94.5 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 191..342 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 317..436 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 26..224 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 237..313
e-value: 6.7E-22
score: 77.6
coord: 2..60
e-value: 2.5E-12
score: 46.9
coord: 363..437
e-value: 1.3E-17
score: 63.8 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 196..235
e-value: 4.7E-14
score: 51.7
coord: 154..195
e-value: 0.0024
score: 17.7
coord: 322..362
e-value: 6.1E-8
score: 32.3 |
| None | No IPR available | PANTHER | PTHR45641 | FAMILY NOT NAMED | coord: 1..249 |
| None | No IPR available | PANTHER | PTHR45641 | FAMILY NOT NAMED | coord: 81..372
coord: 251..450 |
| None | No IPR available | PANTHER | PTHR45641:SF1 | | coord: 1..249
coord: 81..372
coord: 251..450 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 1..61
score: 7.138 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 197..440
score: 24.352 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-latissima_F_contig99.17608.1 ID=prot_S-latissima_F_contig99.17608.1|Name=mRNA_S-latissima_F_contig99.17608.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=452bp
KHAEAEALYLRAIDIKKKMFGPDHAEVATTLNNLALLLTKHGMHGKAEAH
YLRAIGIMEKVFGPDHPEVATMLNHQALLLYKQVRRVYSHCLRLLSIRLD
ERVAGRHDRSLGHTNYYSAKSLRHLQGKHVEAEAVRFRAIVIEEKVLGSD
HPEVATTLDHQALLLYKQGKQVEAEALCLRAIGNDLKVLGPDHPEVATTL
NNLALLLKQQGKHAEAEALYHRAIGIMEKVLGPDHLEVATTLNNLAGMLY
KQGRHAEAEALYLRAIGIKEKVLGPDHPEVAATLNDLALLLQEQGKHAEA
EALYLRAIGIKEKVLGPDHPEVATTLNDLALLLKEQGKHVEAEALYLRAI
DIEEKGLAPNHVEVATSLNNLALLLGEQANVAEAESLYLRAIRINEKALG
PSHHEVATTLHNLAVLFLVQGKYDEAIQTFKRALTITTQKLGAEHASTAL
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Annotated Terms
The following terms have been associated with this polypeptide:
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