prot_S-latissima_F_contig99.17601.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig99.17601.1
Unique Nameprot_S-latissima_F_contig99.17601.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length112
Homology
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BLAST of mRNA_S-latissima_F_contig99.17601.1 vs. uniprot
Match: A0A6H5K175_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 2.450e-37
Identity = 74/111 (66.67%), Postives = 89/111 (80.18%), Query Frame = 0 
Query:    2 GGGSGGSPESDLFPATIQTAENGDGADGPSSRVEVRYGDYIRLWSYSQYANKAGYVGCLRRTTKRRNAVGKGELFVLPPVPPSPSSIFYEACFKIVDPQAEKEDGDVLRFG 112
            G G G S + + FP  I  +E+G  ++ PSSR EVR+GD+IRLW YS YA+KAGYVG LRRT+++RN+VGKGELFVLPPVP SP SIF+E CFKIVDP +EKEDGDVL FG
Sbjct:  238 GDGMGLSQDPNFFPP-IPLSEDGC-SEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSIFHECCFKIVDPHSEKEDGDVLHFG 346
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BLAST of mRNA_S-latissima_F_contig99.17601.1 vs. uniprot
Match: D8LFY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY5_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 6.240e-22
Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 0 
Query:    8 SPESDLFPATIQTAENGDGADGPSSRVEVRYGDYIRLWSYSQYANKAGYVGCLRRTTKRRNAVGKGELFVLPPVPPSPSS 87
            S + + FP  I  +E+G  ++ PSSR EVR+GD+IRLW YS YA+KAGYVG LRRT+++RN+VGKGELFVLPPVP SP S
Sbjct:  246 SQDPNFFPP-IPLSEDGC-SEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYS 323
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig99.17601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K175_9PHAE2.450e-3766.67CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D8LFY5_ECTSI6.240e-2263.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig99contigS-latissima_F_contig99:256912..265205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig99.17601.1mRNA_S-latissima_F_contig99.17601.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig99 256912..265205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig99.17601.1 ID=prot_S-latissima_F_contig99.17601.1|Name=mRNA_S-latissima_F_contig99.17601.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=112bp
GGGGSGGSPESDLFPATIQTAENGDGADGPSSRVEVRYGDYIRLWSYSQY
ANKAGYVGCLRRTTKRRNAVGKGELFVLPPVPPSPSSIFYEACFKIVDPQ
AEKEDGDVLRFG
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