prot_S-latissima_F_contig988.17590.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig988.17590.1
Unique Nameprot_S-latissima_F_contig988.17590.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length258
Homology
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: D7FI64_ECTSI (Tim17 homolog, mitochondrial inner membrane protein of TIM23 complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI64_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 1.400e-151
Identity = 227/264 (85.98%), Postives = 236/264 (89.39%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQ---GAGGGLGAPQAPRPLGLAPPLPPVGAPTGYRPTGAGGELDSSATRSHDVVTGSGFETGTRFEDTLATQDPFASNTGDRYLEGDA--RGAEGGAGGG--GAEKKGWFGRLIGRGGGK 257
            M DRDPCPHRIVGDVGGAF FGL GGG+WHSVKGFRNSPKGQGTQGALKA MYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGP+TAAKNA VGG LLAVIEG+GILL R+MAQ EPPP+EA     GAGGGLGAPQAPRPLGLAPPLPPVGAP GYRP G GGE+DSSATRSHDVVTGSGFETG+RFEDTLATQDPFASNTGDRYLEG A  RGA   A     GAE +GWFGR+IGRGGGK
Sbjct:    1 MGDRDPCPHRIVGDVGGAFAFGLAGGGIWHSVKGFRNSPKGQGTQGALKAVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQVEPPPMEAGGDAGGAGGGLGAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAAEGAESRGWFGRMIGRGGGK 264          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A836CAQ4_9STRA (Tim17-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ4_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.090e-72
Identity = 142/262 (54.20%), Postives = 178/262 (67.94%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQ--GALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQGAGGGLGAPQA-PRPLGLAPPLPPVGAPTGYRPTGAGGE-LDSSATRSHDVVTGSGFETGTRFEDTLATQDPFASNTGDRYLEGDARGAEGGAGGGGAE---KKGWFGRLIGRGG 255
            M++R+PCP+RI+ DVGGA+ FG VGGGV+H++KG RN+PKG       ++ A   RAPVLGGNFAVWG LF+ CDC++ A+R KED WN I SGAATGGILALRAGPKTAAKNA VGGVLLA+IEG+GI L R  AQ +P  + A    GGG    +  P+   LAPP+P  GA  G  P     + +D SA R  DV++GSGF+T +R+ D  A  DP+A++ G   L  +A    GGAG G  E   K+G+FG L GRGG
Sbjct:    1 MSEREPCPYRIIDDVGGAYVFGAVGGGVFHTIKGARNAPKGLNNSWXXSVSAVKARAPVLGGNFAVWGGLFACCDCTMAALRRKEDPWNSIASGAATGGILALRAGPKTAAKNALVGGVLLALIEGMGIGLSRMFAQMKPEDMPAILQEGGGAAPDEGGPKQRALAPPIP-FGAHGGGAPGRRHDDAVDPSAPRQSDVMSGSGFDTDSRYADPFAQADPYATSGG---LVPEA----GGAGAGAPEAPPKRGFFGGLFGRGG 254          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A8J2SJP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJP6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.370e-60
Identity = 100/166 (60.24%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQGAGGGLGAPQAPRPLGLAPPL 166
             + R+PCP+RI+ D+GGA+  G VGG +WH VKG+RN+PKG  T GA +    RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGPK A KNA VGGVLLA+IEG+GIL+ + MA   PP    D    GG      P   GLAPP+
Sbjct:    4 FSGREPCPYRILDDIGGAYAMGCVGGSIWHFVKGWRNAPKGSATSGAFEQVRVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA---PPMASKDDLKHGGADPTLPPTQPGLAPPV 166          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A6S8D9L3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D9L3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.620e-59
Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    4 RDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQGAGGGLGAPQAPRPLGLAPPLP 167
            R+PCP+RI+ DVGGA+  G +GG +WH VKG+RNSP+G    GA+     RAP++GGNFAVWG LF+V DCSL AVR KED WN IL+GAATGG+LA RAGPK AAKNA VGG+LLA+IEG+GIL+ +  A   P   +   G GG      AP  +GLAPP+P
Sbjct:    8 REPCPYRIIDDVGGAYAMGAIGGSIWHFVKGWRNSPRGSALAGAVDQMQVRAPIVGGNFAVWGGLFAVFDCSLSAVRQKEDPWNSILAGAATGGVLAARAGPKAAAKNAVVGGILLALIEGLGILITKAFAPPVPSKDDLKHGDGG------APAQVGLAPPIP 165          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: F0Y463_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y463_AURAN)

HSP 1 Score: 190 bits (483), Expect = 3.140e-58
Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 0
Query:    4 RDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMA 134
            R+PCP+RI+ D+GGA+  G VGG +WH VKG+RN+PK QG  GA++    RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGPK A KNA VGGVLLA+IEG+GIL+ + MA
Sbjct:    1 REPCPYRILDDIGGAYAMGAVGGSIWHFVKGWRNAPKNQGFSGAIEQVKVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA 131          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A7S1TV19_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV19_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.080e-56
Identity = 112/220 (50.91%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    4 RDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQGAGGGLGAPQAPRPLGLAPPLPPVGAPTGYRPTGAGGELDSSATRSHDVVTGSGFETGTRFEDTLATQ--DPFASNTG 221
            RDPCP RI+ DVGGAF  G VGG VWH VKGFRNSP+GQ   G+  A   R+P++GGNFAVWG +F+  DC+L   R KED WN ILSGAATGG+LALRAGP  AA+NAAVGGVLLA+IEG G+++ R+MA    P +EA        G      P  LAPP+   G        G GG+  ++ T       GSGF T         +Q  DPFA+ +G
Sbjct:   10 RDPCPWRILDDVGGAFAMGAVGGTVWHGVKGFRNSPRGQALAGSANAIRIRSPIIGGNFAVWGGIFASFDCTLAWYRQKEDPWNSILSGAATGGVLALRAGPMAAARNAAVGGVLLAIIEGFGLIISRYMAPA--PAVEA--------GPLDPTSPETLAPPIQFGGQSISDMLGGFGGQSGAADTADTPAEAGSGFNTDMYTNAPRDSQFDDPFAAPSG 219          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A7S0I5F5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5F5_9EUKA)

HSP 1 Score: 185 bits (470), Expect = 1.410e-55
Identity = 88/140 (62.86%), Postives = 109/140 (77.86%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPP 140
            + +RDPCPHRI  D+GGAF  G +GGGVW+SVKG RNSP+G+   G++ A   RAPV+GGNFAVWG LFS  DC+LVA+R KED WN I+SGAATGG+LA R G + A+++AAVGGVLLA+IEG+ I L + MA   PPP
Sbjct:    3 VQERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLLGSVTAVKARAPVMGGNFAVWGGLFSSFDCTLVAIRKKEDPWNSIISGAATGGVLAARGGWRAASRSAAVGGVLLAMIEGLNIFLTKMMADTTPPP 142          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A7S3AY71_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY71_9EUKA)

HSP 1 Score: 184 bits (466), Expect = 9.360e-55
Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPP 140
            + +RDPCPHRI  D+GGAF  G +GGGVW+SVKG RNSP+G+   G + A   RAP++GGNFAVWG LFS  DCSLVA+R KED WN I+SGAATGG+LA R G + A ++AAVGGVLLA+IEG+ I L + MA    PP
Sbjct:   19 VQERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLIGGVTAVKARAPIIGGNFAVWGGLFSTFDCSLVAIRRKEDPWNSIISGAATGGVLAARGGWRAAGRSAAVGGVLLAMIEGLNIFLTKMMADSSAPP 158          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A7S0XM34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XM34_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.380e-54
Identity = 89/145 (61.38%), Postives = 108/145 (74.48%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQ 145
            MADR+PCP RI+ DVGGAF  G +GGG+WHS+KG R +P G    G+L A   RAPVLGG FA+WG +F+  DCSL A+R KED WN I+SGAATGG LALRAGP+ AA  AAVGGVLLA+IEG+GI+ G+  A   P  + A+Q
Sbjct:    7 MADREPCPWRIIDDVGGAFCMGNIGGGMWHSIKGARMAPSGARLAGSLSAVQARAPVLGGQFAIWGGIFACFDCSLTAIRQKEDPWNSIISGAATGGTLALRAGPQAAASAAAVGGVLLALIEGMGIMFGKMFAPPSPDQMLAEQ 151          
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Match: A0A7S4M2S1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S1_9EUKA)

HSP 1 Score: 183 bits (465), Expect = 1.410e-54
Identity = 86/140 (61.43%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    1 MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKAAMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPP 140
            + +RDPCPHRI  D+GGAF  G +GGGVW+SVKG RNSP+G+   G++ A   RAP++GGNFAVWG LFS  DCSLVA+R KED WN I+SGAATGG+LA R G + A+++AAVGGVLL +IEG+ I L + MA    PP
Sbjct:   22 VQERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLLGSMTAVKARAPIIGGNFAVWGGLFSTFDCSLVAIRRKEDPWNSIISGAATGGVLAARGGWRAASRSAAVGGVLLGMIEGLNIFLTKMMADTSAPP 161          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig988.17590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI64_ECTSI1.400e-15185.98Tim17 homolog, mitochondrial inner membrane protei... [more]
A0A836CAQ4_9STRA1.090e-7254.20Tim17-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A8J2SJP6_9STRA3.370e-6060.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8D9L3_9STRA3.620e-5959.15Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y463_AURAN3.140e-5867.94Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1TV19_9STRA2.080e-5650.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0I5F5_9EUKA1.410e-5562.86Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3AY71_9EUKA9.360e-5562.14Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0XM34_9STRA1.380e-5461.38Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S4M2S1_9EUKA1.410e-5461.43Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 11..118
e-value: 2.9E-27
score: 95.3
NoneNo IPR availablePANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 3..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..101
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 112..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig988contigS-latissima_F_contig988:148519..152179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig988.17590.1mRNA_S-latissima_F_contig988.17590.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig988 148236..152179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig988.17590.1 ID=prot_S-latissima_F_contig988.17590.1|Name=mRNA_S-latissima_F_contig988.17590.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=258bp
MADRDPCPHRIVGDVGGAFGFGLVGGGVWHSVKGFRNSPKGQGTQGALKA
AMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILA
LRAGPKTAAKNAAVGGVLLAVIEGVGILLGRFMAQQEPPPLEADQGAGGG
LGAPQAPRPLGLAPPLPPVGAPTGYRPTGAGGELDSSATRSHDVVTGSGF
ETGTRFEDTLATQDPFASNTGDRYLEGDARGAEGGAGGGGAEKKGWFGRL
IGRGGGK*
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