prot_S-latissima_F_contig988.17584.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig988.17584.1
Unique Nameprot_S-latissima_F_contig988.17584.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length251
Homology
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI00100F5D10 (uncharacterized protein LOC114126774 n=1 Tax=Aphis gossypii TaxID=80765 RepID=UPI00100F5D10)

HSP 1 Score: 136 bits (343), Expect = 1.130e-34
Identity = 84/216 (38.89%), Postives = 116/216 (53.70%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRDIIDGIFPDIGVFWAR---WEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTR 213
            + GDFRQ LPVV RGTR   V AC+  S LW  + V  LRV MRV   G  DP   DF    ++IGNG   D+  + D      V IP +L    +D + + + I+P++ +  +    W  +      K   A +       +ND+++ ++P E  +  S+D   ++D  VNYPVEFLHTL P G+P H + LKIGAP  LLR + P   L NGTR
Sbjct:  108 LAGDFRQTLPVVPRGTRADEVRACLKSSYLWPKIQVKSLRVNMRVYLRG--DPEAEDFSNLLLQIGNG---DLQEYDDR----KVNIPNNLCSVVKDLKSLSEQIYPNLNILHSENLTWLNKRAILIPKNDTAAS-------INDSLLDQLPTEMAKYSSVDSVVELDDVVNYPVEFLHTLNPPGIPPHNLCLKIGAPITLLRNLIPPK-LCNGTR 306          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI000D62A1C5 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62A1C5)

HSP 1 Score: 132 bits (333), Expect = 1.470e-32
Identity = 85/223 (38.12%), Postives = 128/223 (57.40%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDP----RDIIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAYDDQRK----LNDNIMQRVPVEEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCL 215
            MGGDFRQVLPVVRRGTR Q+V++ +  SPLW+ +  ++L + MR     R DP   DF    +R+G+G EE +   +++F    +RIP D+ +A  D      D+ID IFP + +          +     + +RA    + +    +ND ++ R   +E    S D+ +D D    YP+EFL++LT  G+P H + LKIG P +LLR I+P++GL NGTR +
Sbjct:  124 MGGDFRQVLPVVRRGTRAQIVDSSLRMSPLWSSIKKIRLTLNMRA----RSDPWFSDFL---LRVGDGDEEMM---EESF----IRIPDDMAIAYADKDKSKHDLIDAIFPSLQI---------NEADSNYIVSRAILSTKNENVDEINDQLIDRFCGDEKVYYSFDEAED-DINNFYPMEFLNSLTVRGLPPHYLRLKIGCPIMLLRNIDPSNGLCNGTRLI 322          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI001CB95FA2 (uncharacterized protein LOC122587509 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB95FA2)

HSP 1 Score: 132 bits (332), Expect = 2.290e-32
Identity = 79/219 (36.07%), Postives = 126/219 (57.53%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIV---AGEDPRD-IIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCL 215
            +GGDFRQ LP+VR GT+ + + AC+ +S LW  +H+L+L   MR L     DP    F ++ ++IG+GTE     H D    D + IP  +++   + +D  D +ID ++P+I  F       ++  +   +  +  + D+  +ND ++Q+ P E  E  S D+T D++    Y  ++LH+LTP GMP HR+ LK  +P +LLR +NP  GL NGTR +
Sbjct:  215 LGGDFRQTLPIVRTGTKAETIAACLTNSTLWPSLHILRLEENMRALL----DP---SFSKFLLKIGDGTE---TTHDD----DLINIPASMLIDKHSEDDSLDALIDSVYPNIQSF-----TNSRALNRAILTTKNIFVDE--INDLLIQKFPGEPTEYTSFDETLDLNDQTQYE-DYLHSLTPDGMPPHRLLLKPNSPIVLLRNLNPTEGLCNGTRLI 411          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: Q65XV4_ORYSJ (ATP-dependent DNA helicase n=9 Tax=Oryza TaxID=4527 RepID=Q65XV4_ORYSJ)

HSP 1 Score: 134 bits (338), Expect = 3.210e-32
Identity = 88/226 (38.94%), Postives = 123/226 (54.42%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHR---DFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVA-GEDPRD-IIDGIFPDIGVFWAR---WEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDD-----TQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTR 213
            +GGDFRQ+LPVVR+G R Q+VNA I  S LW   H+ +L   MR+    RD+   +   DF +W + IG+G      +   A   + + IP DLI+  G DP++ I+  I+P++   + +    E R   C   E          RK+N+ IM  +  EE   LS D      T D ++ V YP EFL++L   GMP H + LK+G P +LLR IN +SGL NGTR
Sbjct: 1194 LGGDFRQILPVVRKGRRTQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDG------KTTSADGEEWIEIPDDLILKKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETA--------RKINEFIMNMIEGEEITYLSCDTVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTR 1405          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI000CA72EAD (ATP-dependent DNA helicase rrm3-like n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=UPI000CA72EAD)

HSP 1 Score: 131 bits (329), Expect = 6.720e-32
Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRDIIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVN--YPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCLL 216
            MGGDFRQ+LPVV RGT   +VNACI  S LW  V ++ L + MR+ +  +D+   ++F  + ++IG G E+      D  + D +++   +I+       +I  IFP++   +           D+ +      +D   +N  I+   P    E LS D  +D +S     Y VEFL+TLTP G P HR+ LKIG P ILLR I+P  GL NGTR ++
Sbjct:  225 MGGDFRQILPVVIRGTCSHIVNACIKSSSLWRIVQIMHLTINMRIHQ--QDNEEQKEFVNYLLKIGQGEEQKY----DDISEDIIKLDNTMILDNGILELLISTIFPNLDSNYQDTINYINYIKDRAILT-TRNEDVDNINSQIINIFPGNAQEFLSADSVEDENSVYENLYSVEFLNTLTPNGTPLHRLVLKIGVPIILLRNISPIEGLCNGTRLIV 435          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI000B904B00 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B904B00)

HSP 1 Score: 129 bits (323), Expect = 8.990e-32
Identity = 83/223 (37.22%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDP----RDIIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAY----DDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCL 215
            MGGDFRQVLPVV+RGTR Q+V++ +  SPLW     ++L + MR L    +DP + DF    +R+G+G+EE +           +RIP D+ +   +P    +++I+ +FP I         ++   S   + +RA      D   ++ND ++     +E    S D+ +D D    YPVEFL++LT +G+P H++ LKIG P ILLR I+P+ GL NGTR +
Sbjct:   31 MGGDFRQVLPVVKRGTRAQIVDSSLRMSPLWHLTKKMRLTINMRAL----NDPWYSDFL---LRVGDGSEESI-------EGSYIRIPDDMTIPFSNPENSIKELINVVFPSI---------QSNVYSSDYIISRAILSTKNDSVDEINDQMIDMFQGDEKVYYSFDEVED-DRHNFYPVEFLNSLTVSGLPPHKLRLKIGCPIILLRNIDPSHGLCNGTRLI 229          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI001C18DB6F (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C18DB6F)

HSP 1 Score: 130 bits (326), Expect = 1.480e-31
Identity = 75/221 (33.94%), Postives = 122/221 (55.20%), Query Frame = 0
Query:    2 GGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGR--DDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRDIIDGIFPDIGV-FWARWEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVN-YPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCLLLS 218
            GGDF Q+LPVV +G RE +V +C+  S LW  V ++ L++ MR+ R     D    ++F EW +++G G    +         + +R+P D+I+  ++  D+I+ I+ +    F  ++       + K V       D   +N  IM + P E  E  S D  ++  +  + YP+EFL++LT  G+P H+++LKIG+P ILLR +NP+ GL NGTR +  S
Sbjct:  117 GGDFCQILPVVIKGNREDIVGSCLRRSTLWTHVKLITLKINMRLFRTENQPDAAEQKEFAEWLLKVGEGRIPTIR----GLENNIIRLPNDIILPSQNINDLINFIYSNFTTHFNPQYLVERAILTPKNV-------DVNNVNTIIMDQFPGEAVEYYSADIIEEQTNPEHQYPIEFLNSLTIGGLPPHKLSLKIGSPIILLRNLNPSDGLCNGTRLICCS 326          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: A0A2N9FJU1_FAGSY (ATP-dependent DNA helicase n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FJU1_FAGSY)

HSP 1 Score: 132 bits (332), Expect = 1.910e-31
Identity = 90/230 (39.13%), Postives = 131/230 (56.96%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRH---RDFCEWQMRIGNGT--EEDVLRHKDAFAADTVRIPGDLIVAG-EDP-RDIIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAYDDQ--RKLNDNIMQRVPVEEFESLSIDD-----TQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCLL 216
            +GGDFRQ+LPVV++G RE +V + I+ S LW   H+ +L+  MR+ +    +      +DF EW ++IG+G   EED          + + IP DLI+   E+P +DIID I+PD+ V +       KD S  + RA  A  ++   +LND I+  +  EE E LS D      +   D  V YPVEFL+TL   G+P H++ LK+G P +LLR +N   GL NGTR ++
Sbjct:  376 LGGDFRQILPVVKKGKREDIVYSAISKSYLWNYCHIFKLQTNMRLRQNNMSEMETSSIKDFSEWILKIGDGEFGEED--------DDNKITIPNDLIIQSTENPMQDIIDSIYPDLKVKY-------KDPSYLQDRAILAPTNEVVEELNDYIISSLNEEEHEYLSSDSVCKASSNVADQDVLYPVEFLNTLRFPGLPNHKLTLKVGLPIMLLRNLNQNGGLCNGTRLII 590          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: UPI001C1C2879 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C2879)

HSP 1 Score: 129 bits (325), Expect = 3.520e-31
Identity = 75/221 (33.94%), Postives = 122/221 (55.20%), Query Frame = 0
Query:    2 GGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGR--DDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRDIIDGIFPDIGV-FWARWEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVN-YPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCLLLS 218
            GGDFRQ+LPVV +G RE +V +C+  S LW  V ++ L++ MR+ R     D    ++F EW +++G G    +         + +R+P D+I+  ++  D+I+ I+ +    F  ++       + K V       D   +N  IM +   E  E  S D  ++  +  + YP+EFL++LT  G+P H+++LKIG+P ILLR +NP+ GL NGTR +  S
Sbjct:  161 GGDFRQILPVVIKGNREDIVGSCLRRSTLWTHVKLITLKINMRLFRTENQPDAAEQKEFAEWLLKVGEGRIPTIR----GLENNIIRLPNDIILPSQNINDLINFIYSNFTTHFNPQYLVERAILTPKNV-------DVNNVNTIIMDQFSGEAVEYYSADIIEEQTNPEHQYPIEFLNSLTIGGLPPHKLSLKIGSPIILLRNLNPSDGLCNGTRLICRS 370          
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Match: A0A6P6UZ78_COFAR (ATP-dependent DNA helicase n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6UZ78_COFAR)

HSP 1 Score: 130 bits (326), Expect = 4.120e-31
Identity = 80/239 (33.47%), Postives = 134/239 (56.07%), Query Frame = 0
Query:    1 MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGRDDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRDIIDGIFPDIGVFWARWEPRTKD--CSDKEVRARAAYDDQRKLNDNIMQRVPVEEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLRTINPASGLLNGTRCLLLSTSPTGTSRRNYHRTECGQD 237
            +GGDFRQ LPVVR+GT+ +++NAC+ +SPLW  +  LQL   MR     + DP    F ++ ++IG+GT+E           D V++P  ++V   +  D I+ +   I + +  ++  +K   CS          +   ++ND ++++ P +  E LS D+T + +    Y ++ L+TLTP+ +P HR+ LK+ AP ILLR ++PA GL NGTR ++ S S   +  +      CG++
Sbjct:  207 LGGDFRQTLPVVRKGTKAEMINACLINSPLWHKLEKLQLTENMRA----KLDP---SFTQFLLKIGDGTQE-------TDENDIVKLPSSIVVNYNNETDAIEKL---INIVYPEFKDPSKKLHCSQNRAILTTKNNFVDEINDELIKKFPGDLAEYLSYDETLNENHQSEY-IDLLNTLTPSNLPPHRLLLKLNAPIILLRNLDPAEGLCNGTRLIIKSLSKNVSCAKIAVGDFCGKE 427          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig988.17584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00100F5D101.130e-3438.89uncharacterized protein LOC114126774 n=1 Tax=Aphis... [more]
UPI000D62A1C51.470e-3238.12ATP-dependent DNA helicase PIF1-like n=1 Tax=Cynar... [more]
UPI001CB95FA22.290e-3236.07uncharacterized protein LOC122587509 n=1 Tax=Erige... [more]
Q65XV4_ORYSJ3.210e-3238.94ATP-dependent DNA helicase n=9 Tax=Oryza TaxID=452... [more]
UPI000CA72EAD6.720e-3236.70ATP-dependent DNA helicase rrm3-like n=1 Tax=Rhizo... [more]
UPI000B904B008.990e-3237.22ATP-dependent DNA helicase PIF1-like n=1 Tax=Helia... [more]
UPI001C18DB6F1.480e-3133.94Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A2N9FJU1_FAGSY1.910e-3139.13ATP-dependent DNA helicase n=1 Tax=Fagus sylvatica... [more]
UPI001C1C28793.520e-3133.94Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A6P6UZ78_COFAR4.120e-3133.47ATP-dependent DNA helicase n=1 Tax=Coffea arabica ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 1..215
e-value: 3.0E-41
score: 141.8
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 1..214
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 1..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig988contigS-latissima_F_contig988:15869..16621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig988.17584.1mRNA_S-latissima_F_contig988.17584.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig988 15685..16964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig988.17584.1 ID=prot_S-latissima_F_contig988.17584.1|Name=mRNA_S-latissima_F_contig988.17584.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=251bp
MGGDFRQVLPVVRRGTREQVVNACINHSPLWAGVHVLQLRVIMRVLRAGR
DDPRHRDFCEWQMRIGNGTEEDVLRHKDAFAADTVRIPGDLIVAGEDPRD
IIDGIFPDIGVFWARWEPRTKDCSDKEVRARAAYDDQRKLNDNIMQRVPV
EEFESLSIDDTQDMDSAVNYPVEFLHTLTPAGMPTHRVALKIGAPFILLR
TINPASGLLNGTRCLLLSTSPTGTSRRNYHRTECGQDGLRAPSHANFQRD
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like