prot_S-latissima_F_contig985.17570.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig985.17570.1
Unique Nameprot_S-latissima_F_contig985.17570.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length260
Homology
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BLAST of mRNA_S-latissima_F_contig985.17570.1 vs. uniprot
Match: A0A6H5KKX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 3.050e-81
Identity = 153/258 (59.30%), Postives = 168/258 (65.12%), Query Frame = 0 
Query:    1 MFATTSFYRGETSQKTPLLPE--GGRKGHPSRTSYRGAGSDRGSCCMLPSASPLLSLLLARPTDQDHSSVVGAKNLFGVLLEQKNVWYKFSCASPPMPPHTLAFLTDQARPDAVLWENSRLYTHCLSSPPSVYPMGGMPQHATGFPNVPGGGVGVGEVAVEGRKAAPDLSLSTLEFYLFSFAWYPLSSCGDFYAGLGGPGRLP-PHQYHSGVGGGWTSVNFRPERVALGWRRYGVKGLTHRNPYMTLLKDYVEAFFPH 255
            MFATTSFY   +     L P   GG     S +  R    D   C M P A  LLSLLLARP +   SS    KNLF VLLE + VWY F+C SPPMPPHTLAFL  +  P  VL+ENSRLYTHCLSSPPS++P G MP HA  F  VPGG +  G  A E  +AAPDL LS LE YLFSFAWY LSS  DFY GL GPGRL  PH+ H  +        FR ERVALGWRR+GV GLTH NPYMTLLKDY+EAFFPH
Sbjct:   97 MFATTSFY-SVSGLSDALKPTRAGGSSSRNSNSRRRNRPGDPRLCGMEPMAVSLLSLLLARPPE---SSPPDTKNLFSVLLEPQKVWYSFTCTSPPMPPHTLAFLRHEGLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQEVPGGDLVGGGAAAEVVRAAPDLKLSALELYLFSFAWYALSSYEDFYHGLEGPGRLSVPHRTHHSM-----EPAFRQERVALGWRRHGVIGLTHLNPYMTLLKDYLEAFFPH 345
[Close]
BLAST of mRNA_S-latissima_F_contig985.17570.1 vs. uniprot
Match: D7FGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU8_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.710e-36
Identity = 91/168 (54.17%), Postives = 103/168 (61.31%), Query Frame = 0 
Query:   90 CASPPMPPHTLAFLTDQARPDAVLWENSRLYTHCLSSPPSVYPMGGMPQHATGFPN-VPGGGVGVGEVAVEGRKAAPDLSLSTLEFYLFSFAWYPLSSCGDFYAGLGGPGRLP-PHQYHSGVGGGWTSVNFRPERVALGWRRYGVKGLTHRNPYMTLLKDYVEAFFPH 255
            C   PM    L+ L   ARP     E+S   T  L S   ++P G MP HA  F   VPGG +  G  A E  +AAPDL LSTLE YLF FAWY LSS  DFY GL GPGRL  P++ H  +        FR ERVALGWRR+GV GLTH NPY+TLLKDY+EAFFPH
Sbjct:   82 CGMEPMAVSLLSLLL--ARPP----ESSPPDTKNLFSVLLLFPQGRMPHHAVRFQEEVPGGDLVGGGAAAEVVRAAPDLELSTLELYLFHFAWYALSSYEDFYHGLEGPGRLTVPYRTHHSM-----EPAFRQERVALGWRRHGVIGLTHLNPYLTLLKDYLEAFFPH 238
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig985.17570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKX4_9PHAE3.050e-8159.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGU8_ECTSI2.710e-3654.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig985contigS-latissima_F_contig985:115180..130395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig985.17570.1mRNA_S-latissima_F_contig985.17570.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig985 115180..132320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig985.17570.1 ID=prot_S-latissima_F_contig985.17570.1|Name=mRNA_S-latissima_F_contig985.17570.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=260bp
MFATTSFYRGETSQKTPLLPEGGRKGHPSRTSYRGAGSDRGSCCMLPSAS
PLLSLLLARPTDQDHSSVVGAKNLFGVLLEQKNVWYKFSCASPPMPPHTL
AFLTDQARPDAVLWENSRLYTHCLSSPPSVYPMGGMPQHATGFPNVPGGG
VGVGEVAVEGRKAAPDLSLSTLEFYLFSFAWYPLSSCGDFYAGLGGPGRL
PPHQYHSGVGGGWTSVNFRPERVALGWRRYGVKGLTHRNPYMTLLKDYVE
AFFPHGVIPA
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