prot_S-latissima_F_contig985.17568.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig985.17568.1
Unique Nameprot_S-latissima_F_contig985.17568.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length993
Homology
BLAST of mRNA_S-latissima_F_contig985.17568.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 1026 bits (2652), Expect = 0.000e+0
Identity = 581/897 (64.77%), Postives = 656/897 (73.13%), Query Frame = 0
Query:   26 YKKPSALSLKKVVDGKVALMDGGHEQSLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSERPRGSTPASEGLDLTSGALLFEVRDYHRNQRLSHLYLLHELLRIDQGPDNNLHPKAGQVLDRS-PGLMRELLDLARELFKENPPVYGHHGVGGEGAGGGAGATVIAARKREWIAQRVSELSEVVGCMVIAGYHRYRLQGDQADLVMDMLSFMQEADFSVPIAFRAYIPAGSEVATKARSFSFTLALLGIEALDLQSVDCPEELVAHHALFRDYNVDDPSARQVA---RDRLGAVNEVLASMVDATKSERSAANSTRLLIVGVSDFVLFTVHHPGHATLVLLSWGVLLRNACVVIPGLADGWGEDSGRGAMNFATREESIAHLAEGVRXXXXXXXXXXXXXXGMWGAEAANFSGLCQPPSLRLGPSPRRATPPSPHEVVLPPRPAPDGAVSADMFLLVVSCFIRAVHCAPPLERER-EWVMVEGQAVVAEXXXXXXXXXXXXGRAKGFGPEHLREVDALTRVASDIFRGQTVLSWGALMSARRRDAGPTNGAAGLLLNASRSLFPLSVGSFARLLSSLVHSQDTADIAHAILAGIDEDEXXXXNSDGYILGDGATGAGSAQPGETNRYVAILRAKRHESDRVWKKVEEADGAFSGGRGGGDWGHVVSSGASVVVTRSFAVMDTGMRVRAGTVCDVIKGNDEEGGVQDEEAKRAGADSHIYVRFSHPEPPWAVLVGRLDGMSTELQGLGVRFSEASALSVAKRVSDTQAVVELMNNVFKHSECGPLRAETVLRSCRAQAWLVAEGFPQLARLLRESRRTLEGELRTGRCYSDPVANAELESAGGADALIAAFQGLGDPLPLEDGSDCFAAQLPRVLVRILRALLPLVAAHPPQ 917
            YKKPSA SLKKVVDGKVALM+G  E+SLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSE PRGS PASEGLD +S  LLFEVRDY RNQRL+HLYLLHELLRIDQGPDN+LHPKA QVL R  P LMR+L +L RELFKENPPV       G+G GG       AARKREW+AQRV+ELSEVVGCMVIAGY+RYR+QGDQA LVMDMLSFMQEADFS+P AFRAYIPA SEV+ KARSFSFTLALLGIEALDLQ VD P+E+V HHAL RD+N DD S   +A      L  + +        ++++R      RLLI G S+     +  P   TLV+++WGVLLRNAC+VIPGL+ GWGEDSG  AM FA +E++IA LAEGVR              G+WGAEAA+FS LCQPPS RLGPSPRR TPP+PHEVVLPPRPA D AVSADMFLLVVSCF+RAVHCAPP      E     GQ  +              G   GF PEHL EV  L RVA+ IFRGQT LSWGAL+SAR  D GP++GAAGLLLNASRSLFPLS GSF+ LLSSLVH+QDTADIAHAILAG+D +E      DG     G   +G+      NRYVA+L A+  +  R+W K                 G V S+G+SVVVT++FAV DTGM V  GTVC V++G DE G              +I+V+F H +PPW  LVGRL     ELQG+G RFSEASALSVA+R+SD QAVV LMN+VF+HSECGPLRAETVLRSC AQ WLVA GF  LARLL+ESRRTLEGELRTGRCY+DP A AEL+ AGGA AL++AFQ  G+PLP  DGS CFAAQLPR+LV ILR LLPLVAAHPPQ
Sbjct:  558 YKKPSAESLKKVVDGKVALMEGEQERSLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSESPRGSPPASEGLDFSSQFLLFEVRDYFRNQRLAHLYLLHELLRIDQGPDNSLHPKAEQVLGRHHPDLMRDLFELLRELFKENPPVVVSES--GQGWGG-------AARKREWVAQRVAELSEVVGCMVIAGYYRYRVQGDQARLVMDMLSFMQEADFSMPPAFRAYIPAASEVSKKARSFSFTLALLGIEALDLQKVDSPDEMVLHHALLRDFNADDASISTMACKWEQPLCQLKDPSVVCCVLSQAKR------RLLIEGPSEGSPEMIETPQ--TLVVVAWGVLLRNACMVIPGLSQGWGEDSGAAAMEFAVKEDAIACLAEGVRGLADTWQDTSGYGAGIWGAEAAHFSALCQPPSRRLGPSPRRGTPPAPHEVVLPPRPAADAAVSADMFLLVVSCFVRAVHCAPPPPVHLGESPQGGGQRGLV-----------GVGEGVGFRPEHLGEVAKLARVAASIFRGQTALSWGALVSAREND-GPSSGAAGLLLNASRSLFPLSAGSFSLLLSSLVHNQDTADIAHAILAGLDHNEEDLDYDDG-----GGVDSGN------NRYVAMLSARGPKESRLWAKWPTGGRRXXXXXXXXXXGFV-SAGSSVVVTQAFAVTDTGMTVPRGTVCSVVEGVDEWG--------------NIHVKFPHRQPPWVALVGRLYATLAELQGMGGRFSEASALSVAERLSDAQAVVGLMNSVFRHSECGPLRAETVLRSCAAQDWLVAGGFEHLARLLKESRRTLEGELRTGRCYADPYAKAELDDAGGAAALLSAFQADGNPLPTNDGSSCFAAQLPRILVGILRHLLPLVAAHPPQ 1399          
BLAST of mRNA_S-latissima_F_contig985.17568.1 vs. uniprot
Match: A0A7R9Y987_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y987_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.760e-6
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   17 EGLGLVRETYKKPSALSLKKVVDGKVALMDGGHEQSLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSERPRGSTPASEGLDLTSGALLFEVRDYHRNQRLSHLYLLHELLRIDQGPDNNLHPKAGQVL 151
            E L L+   Y+ PSA S  K+   ++ +++GG E+SLPGG+A  K  ++ + L+ +DEVQ  +V   FL           T   +  +L S   L  +R Y   Q+L +L  L  LLR     ++ +HP    VL
Sbjct:   10 ERLRLLEAFYEPPSAASRAKIEAERINVVEGGKEESLPGGKAAAKLILAFASLVGIDEVQAGRVFLRFLEANY-------TKDVDFDELESPKTLERLRAYFFTQQLYNLRSLTYLLRA---AEDEMHPSFDIVL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig985.17568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGV5_ECTSI0.000e+064.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7R9Y987_9STRA1.760e-632.59Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31431FAMILY NOT NAMEDcoord: 52..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig985contigS-latissima_F_contig985:15363..37744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig985.17568.1mRNA_S-latissima_F_contig985.17568.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig985 15363..46758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig985.17568.1 ID=prot_S-latissima_F_contig985.17568.1|Name=mRNA_S-latissima_F_contig985.17568.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=993bp
MPQGWWSWLCCRAPRGEGLGLVRETYKKPSALSLKKVVDGKVALMDGGHE
QSLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSERPRGSTPAS
EGLDLTSGALLFEVRDYHRNQRLSHLYLLHELLRIDQGPDNNLHPKAGQV
LDRSPGLMRELLDLARELFKENPPVYGHHGVGGEGAGGGAGATVIAARKR
EWIAQRVSELSEVVGCMVIAGYHRYRLQGDQADLVMDMLSFMQEADFSVP
IAFRAYIPAGSEVATKARSFSFTLALLGIEALDLQSVDCPEELVAHHALF
RDYNVDDPSARQVARDRLGAVNEVLASMVDATKSERSAANSTRLLIVGVS
DFVLFTVHHPGHATLVLLSWGVLLRNACVVIPGLADGWGEDSGRGAMNFA
TREESIAHLAEGVRGLADTWQDTSGQGAGMWGAEAANFSGLCQPPSLRLG
PSPRRATPPSPHEVVLPPRPAPDGAVSADMFLLVVSCFIRAVHCAPPLER
EREWVMVEGQAVVAEGEGGEGRGEEEEGRAKGFGPEHLREVDALTRVASD
IFRGQTVLSWGALMSARRRDAGPTNGAAGLLLNASRSLFPLSVGSFARLL
SSLVHSQDTADIAHAILAGIDEDEDEDENSDGYILGDGATGAGSAQPGET
NRYVAILRAKRHESDRVWKKVEEADGAFSGGRGGGDWGHVVSSGASVVVT
RSFAVMDTGMRVRAGTVCDVIKGNDEEGGVQDEEAKRAGADSHIYVRFSH
PEPPWAVLVGRLDGMSTELQGLGVRFSEASALSVAKRVSDTQAVVELMNN
VFKHSECGPLRAETVLRSCRAQAWLVAEGFPQLARLLRESRRTLEGELRT
GRCYSDPVANAELESAGGADALIAAFQGLGDPLPLEDGSDCFAAQLPRVL
VRILRALLPLVAAHPPQNQPPLAAMETQHGMNGGDGGDAATVAAAAAAAA
VAAAAAAAEAALGESLYGLAGLGGFWPPFPRRSRGPGAEGGG*
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