prot_S-latissima_F_contig983.17553.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig983.17553.1
Unique Nameprot_S-latissima_F_contig983.17553.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length132
Homology
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: D8LN00_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN00_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 3.970e-43
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFET 132
            P +PY + +L  +I+AET+ FHYG HH  YVNN+NA I AD  LEG SLW  MK+T+GT FNNAAQ YNHNLYWNSLSP+GGG PTGDL  AIV AFG+YE F+T
Sbjct:   31 PALPYGESDLEPYITAETVGFHYGAHHQGYVNNMNAFIEADPELEGLSLWKLMKQTEGTIFNNAAQIYNHNLYWNSLSPSGGGMPTGDLYTAIVAAFGSYEDFQT 135          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: D7FRS6_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS6_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.040e-37
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFET 132
            P +PY + +L  +I+ ET+ FHYG HH  YVNN+NA I AD  LEG SL   M +T+GT FNNAAQ YNHNLYWNSLSP+GGG P GDL  AI  AFG+YE F+T
Sbjct:   31 PALPYGESDLEPYITEETVGFHYGAHHQGYVNNMNAFIEADPDLEGLSLSALMDQTEGTIFNNAAQIYNHNLYWNSLSPSGGGVPEGDLYTAIQSAFGSYEEFQT 135          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.510e-34
Identity = 62/104 (59.62%), Postives = 75/104 (72.12%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P++P+  D L  HISAETI +HYGKHHAAYV  LNA I+ +S LEGKSL   MK   G  FNNAAQ +NH  YW SLSP+GGG PTG +  AI + FG++EAF+
Sbjct:    6 PELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISTNSELEGKSLDEIMKTASGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFK 109          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A3M2FR21_ACTSX (Superoxide dismutase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FR21_ACTSX)

HSP 1 Score: 123 bits (308), Expect = 7.260e-33
Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAF 130
            P +P+ DD L  HISA TISFHYGKHHAAYVNNLN  I   + L GK L   +  + G  FNNAAQ +NH  YWNS+SP GGG+P+GD+ AAI  AFG+Y+AF
Sbjct:    6 PPLPWADDALEPHISARTISFHYGKHHAAYVNNLNKAIDG-TDLAGKPLEEIITSSSGGVFNNAAQVWNHTFYWNSMSPGGGGQPSGDIAAAIDAAFGSYDAF 107          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: K2BBZ7_9BACT (Superoxide dismutase n=2 Tax=Bacteria TaxID=2 RepID=K2BBZ7_9BACT)

HSP 1 Score: 121 bits (303), Expect = 4.240e-32
Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0
Query:   29 PDMPYD-DELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFET 132
            P +PY  D L  HIS ET+ +HYGKHH AYVNNLN ++   +  E KSL   +KK  G  FNNAAQ +NH  YW+SLSPTGGG+PTG+L   I  +FG+++AF+T
Sbjct:    6 PALPYAMDALTPHISKETLEYHYGKHHRAYVNNLNNLVTG-TEFENKSLEEIIKKASGVIFNNAAQIWNHTFYWHSLSPTGGGKPTGELAERIEKSFGSFDAFKT 109          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A4P6P0G8_9GAMM (Superoxide dismutase n=1 Tax=Litorilituus sediminis TaxID=718192 RepID=A0A4P6P0G8_9GAMM)

HSP 1 Score: 120 bits (302), Expect = 5.990e-32
Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 0
Query:   29 PDMPYD-DELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P +PY+ D L  HISAET+SFHYGKHH  YV  LN +I   +   GKSL   +K + G  FNNAAQ +NH  YW+SLSPTGGG PTGDLLAAI  +FG+++ F+
Sbjct:    6 PSLPYEQDALEPHISAETLSFHYGKHHNTYVVKLNGLIEG-TEFAGKSLEDIVKTSSGGVFNNAAQIWNHTFYWHSLSPTGGGEPTGDLLAAINASFGSFDEFK 108          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A7Y5GYH9_9DELT (Superoxide dismutase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y5GYH9_9DELT)

HSP 1 Score: 120 bits (301), Expect = 8.260e-32
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P++PY  D L+ HISAETI +HYGKHHAAYV NLN ++A  ++ EGKSL   ++ + G  FNNAAQ +NH  YW+SLSP GGG PTG L AAI   FG +  F+
Sbjct:    6 PELPYAKDALQPHISAETIEYHYGKHHAAYVANLNRLVAG-TAFEGKSLEEVVRTSSGGIFNNAAQIWNHTFYWHSLSPNGGGEPTGALAAAITHTFGDFATFK 108          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A661MY79_9DELT (Superoxide dismutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MY79_9DELT)

HSP 1 Score: 120 bits (300), Expect = 1.170e-31
Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   29 PDMPYD-DELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P +PY+ D L  HISA T+ FHYGKHH  YVN LNA   ADSS+ GKSL   ++  +G  FNNAAQ +NH  YWNS+SP GGG PTG +  AI  +FG++  F+
Sbjct:    6 PALPYEKDALAPHISANTLGFHYGKHHQGYVNKLNAAAEADSSIAGKSLEDLVRTAEGGVFNNAAQIWNHTCYWNSMSPDGGGEPTGKIAEAIKASFGSFSDFK 109          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A1I6AU47_9GAMM (Superoxide dismutase n=27 Tax=root TaxID=1 RepID=A0A1I6AU47_9GAMM)

HSP 1 Score: 119 bits (299), Expect = 1.700e-31
Identity = 60/104 (57.69%), Postives = 73/104 (70.19%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P +PY  D L+ HISAET+ +HYGKHH  YV NLN +IA  +  EGKSL   +K + G  FNNAAQ +NH  YWN LSP GGG PTG+L  AI  AFG++EAF+
Sbjct:    6 PPLPYAQDALQPHISAETLEYHYGKHHNTYVVNLNNLIAG-TEYEGKSLEEIIKTSSGGLFNNAAQVWNHTFYWNCLSPNGGGEPTGELAEAINKAFGSFEAFK 108          
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT)

HSP 1 Score: 119 bits (298), Expect = 2.280e-31
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
Query:   29 PDMPY-DDELRAHISAETISFHYGKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLYWNSLSPTGGGRPTGDLLAAIVDAFGTYEAFE 131
            P++PY  D L  HIS ET+ FHYGKHH  YVN LN  +  D+SL+GKSL   +K   G  FNNAAQ +NH  YWNSLSP GGG PTG +  AI  +FG++  F+
Sbjct:    6 PELPYAKDALAPHISKETLEFHYGKHHQGYVNKLNKAVEDDASLQGKSLEDLIKTQKGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFK 109          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig983.17553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN00_ECTSI3.970e-4366.67Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7FRS6_ECTSI1.040e-3761.90Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LI17_ECTSI2.510e-3459.62Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A3M2FR21_ACTSX7.260e-3360.19Superoxide dismutase n=1 Tax=Actinomyces sp. TaxID... [more]
K2BBZ7_9BACT4.240e-3255.24Superoxide dismutase n=2 Tax=Bacteria TaxID=2 RepI... [more]
A0A4P6P0G8_9GAMM5.990e-3257.69Superoxide dismutase n=1 Tax=Litorilituus sedimini... [more]
A0A7Y5GYH9_9DELT8.260e-3256.73Superoxide dismutase n=1 Tax=Myxococcales bacteriu... [more]
A0A661MY79_9DELT1.170e-3154.81Superoxide dismutase n=1 Tax=Deltaproteobacteria b... [more]
A0A1I6AU47_9GAMM1.700e-3157.69Superoxide dismutase n=27 Tax=root TaxID=1 RepID=A... [more]
A0A356T2V4_9DELT2.280e-3154.81Superoxide dismutase n=2 Tax=Myxococcales TaxID=29... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001189Manganese/iron superoxide dismutasePRINTSPR01703MNSODISMTASEcoord: 49..62
score: 65.59
coord: 88..101
score: 43.66
coord: 29..40
score: 28.33
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyGENE3D1.10.287.990coord: 42..105
e-value: 4.2E-20
score: 74.2
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilySUPERFAMILY46609Fe,Mn superoxide dismutase (SOD), N-terminal domaincoord: 21..106
IPR019831Manganese/iron superoxide dismutase, N-terminalPFAMPF00081Sod_Fe_Ncoord: 29..105
e-value: 3.4E-20
score: 72.3
NoneNo IPR availablePANTHERPTHR42769FAMILY NOT NAMEDcoord: 31..131
NoneNo IPR availablePANTHERPTHR42769:SF9coord: 31..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.774

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig983contigS-latissima_F_contig983:158971..174717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig983.17553.1mRNA_S-latissima_F_contig983.17553.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig983 158970..174717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig983.17553.1 ID=prot_S-latissima_F_contig983.17553.1|Name=mRNA_S-latissima_F_contig983.17553.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=132bp
MRMMCVVTLLGALVGMLAQSKAAMFSCAPDMPYDDELRAHISAETISFHY
GKHHAAYVNNLNAIIAADSSLEGKSLWWFMKKTDGTTFNNAAQFYNHNLY
WNSLSPTGGGRPTGDLLAAIVDAFGTYEAFET
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001189Mn/Fe_SOD
IPR036324Mn/Fe_SOD_N_sf
IPR019831Mn/Fe_SOD_N