prot_S-latissima_F_contig983.17550.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig983.17550.1
Unique Nameprot_S-latissima_F_contig983.17550.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length167
Homology
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 3.060e-54
Identity = 106/165 (64.24%), Postives = 126/165 (76.36%), Query Frame = 0
Query:    5 CVFVCACAMAAKFTEAFVPAFGGRSGRAGLIESTSRQASMSRLVESRQNAFTHASFAAPVSSRSAE----RRSSSA-TTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEIESKSAPVMDAEPAEQKEEE 164
            CV V ACA+AA+  EAFVPA    +GRAG++ +  RQASMS     RQNAF+H S+ +P  ++S+     R SS A TTTMG+FGLGAPEIAVC+AVAALILGPDK+AG AKD+GKMAGELKDVPKEFQAG+EEGE K  +T+ EIES    V DAEPA +KEEE
Sbjct:    6 CVLVWACALAARVAEAFVPAL---AGRAGIMSAAGRQASMSPAAAGRQNAFSHTSYGSPAQAQSSRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKTQKTIREIESNGLAVEDAEPATKKEEE 167          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 1.260e-23
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 0
Query:   54 AFTHASFAAPVSSRS--AERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEIESKSAPVMDAE 156
            A T+ +FA  +  RS   ++R  +A+  M +FGL APE+ VCLAVAALILGPDKL G AKD+GK+AGELK+VPKEFQAG+EEG++KA Q   E   KS  V DAE
Sbjct:   43 ASTNCNFANALQYRSYRLQKRRGAASLQMQLFGLSAPELLVCLAVAALILGPDKLIGSAKDLGKIAGELKEVPKEFQAGMEEGKEKAIQEQKEG-MKSGAVQDAE 146          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.350e-22
Identity = 57/93 (61.29%), Postives = 66/93 (70.97%), Query Frame = 0
Query:   43 SMSRLVESRQNAFTHASFAAPVSSRSAERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGE 135
            S S  V SR +AF      AP S      R S A+ +MG+FGLGAPEIAV + VAAL+LGP+KL   AKD GKMAGELK+VPKEFQAGI+EGE
Sbjct:   35 SSSMAVGSRMSAFA----LAPSSHARLTTRPSRASVSMGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGE 123          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.680e-21
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 0
Query:   45 SRLVESRQNAFTHASFAAPVSSRSAERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEI 145
            S +V S+ ++F   +FA P   +  +R    ++  MG+FGLGAPEIAVC+ VAAL+LGPDKL   A+DVGKMAGELK+VPKEFQ G+EEG++ A   +++I
Sbjct:   37 SYMVSSKTSSF---AFAPPKFIQ--KRNDGRSSIQMGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEAARLEMAQI 132          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.950e-20
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
Query:   70 ERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEIESKSAPVMDAE 156
            +R+S +   TMG+FGLGAPE+ + L  AA +LGPDKLA + KD GK+AGELK+VPKEFQAG+ EGE  A     + E+++A +++ E
Sbjct:   54 QRKSVAQVQTMGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASAKAMKDKQEAEAAVIVEKE 140          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.070e-19
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0
Query:   70 ERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKA 138
            +R+S +   TMG+FGLGAPEI + L  AA +LGPDKLA + KD GK+AGELK+VPKEFQAG+ EGE  A
Sbjct:   51 QRKSVAQVQTMGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASA 119          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.630e-18
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 0
Query:   77 TTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKA 138
            T   G+FGLG PEIA+ L  AA +LGP+KLA + KD GKMAGELK+VPKEFQAGIEEGEK A
Sbjct:   87 TQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGEKNA 148          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A7S2VF94_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF94_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.950e-18
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 0
Query:   70 ERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKA----AQTVSE 144
            +R+S +   TMG+FGLG PEI V L  AA +LGP KLA + KD GK+AGELK+VPKEFQ G+EEGE +A    A+T++E
Sbjct:   52 QRKSVAPVQTMGLFGLGVPEIGVILVAAAFVLGPQKLAELGKDAGKIAGELKEVPKEFQKGLEEGEAQAKVIKAETITE 130          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A7S2R4G4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4G4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.030e-18
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   70 ERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEI 145
            ER S +   TM +FGLG PE+A+ L  AA +LGP KLA + KD GK+AGELK+VPKEFQ G+ EGE++AAQ   E+
Sbjct:   59 ERHSMAPVQTMSLFGLGGPELAIILIAAAFVLGPQKLAELGKDAGKIAGELKEVPKEFQKGLSEGEQQAAQIKKEM 134          
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.460e-18
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
Query:   70 ERRSSSATTTMGVFGLGAPEIAVCLAVAALILGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKA 138
            +R+S +   TMG+FGLGAPE+ + L  AA +LGPDKLA   KD GK+AGELK+VPKEFQAG+ EGE  A
Sbjct:   53 QRKSVAQVQTMGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEANA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig983.17550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI3.060e-5464.24Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A6V1V9D4_HETAK1.260e-2359.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YSI8_9STRA2.350e-2261.29Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2XUZ2_9STRA5.680e-2153.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4A8R7_9STRA3.950e-2052.87Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZFG6_9STRA4.070e-1963.77Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2K8J1_9STRA1.630e-1870.97Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2VF94_9STRA1.950e-1858.23Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2R4G4_9STRA2.030e-1857.89Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F4Y7_9STRA2.460e-1862.32Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416MttA_Hcf106coord: 85..135
e-value: 3.6E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR33162FAMILY NOT NAMEDcoord: 39..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig983contigS-latissima_F_contig983:130275..133001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig983.17550.1mRNA_S-latissima_F_contig983.17550.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig983 130081..134893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig983.17550.1 ID=prot_S-latissima_F_contig983.17550.1|Name=mRNA_S-latissima_F_contig983.17550.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=167bp
MKFVCVFVCACAMAAKFTEAFVPAFGGRSGRAGLIESTSRQASMSRLVES
RQNAFTHASFAAPVSSRSAERRSSSATTTMGVFGLGAPEIAVCLAVAALI
LGPDKLAGVAKDVGKMAGELKDVPKEFQAGIEEGEKKAAQTVSEIESKSA
PVMDAEPAEQKEEEKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E