prot_S-latissima_F_contig983.17547.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig983.17547.1
Unique Nameprot_S-latissima_F_contig983.17547.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length64
Homology
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BLAST of mRNA_S-latissima_F_contig983.17547.1 vs. uniprot
Match: A0A6H5JY66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY66_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 5.730e-25
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    7 RRLEFCEDGFWLITPRGGGFPFYGTQNCASHPADISLNAVWSVVQCDGCGSEVSNQTV 64
            R+LE C+DGFWLITPRGGGFPFYGT NCA HPADIS  A WSVV+CDGCGSE  + TV
Sbjct:  845 RKLEVCDDGFWLITPRGGGFPFYGTLNCADHPADISNLAAWSVVECDGCGSEPLDGTV 902
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig983.17547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JY66_9PHAE5.730e-2577.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig983contigS-latissima_F_contig983:83751..85295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig983.17547.1mRNA_S-latissima_F_contig983.17547.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig983 83750..85295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig983.17547.1 ID=prot_S-latissima_F_contig983.17547.1|Name=mRNA_S-latissima_F_contig983.17547.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=64bp
GGGAVDRRLEFCEDGFWLITPRGGGFPFYGTQNCASHPADISLNAVWSVV
QCDGCGSEVSNQTV
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