prot_S-latissima_F_contig983.17545.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig983.17545.1
Unique Nameprot_S-latissima_F_contig983.17545.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length632
Homology
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 549 bits (1415), Expect = 3.000e-185
Identity = 350/644 (54.35%), Postives = 433/644 (67.24%), Query Frame = 0
Query:    1 MVARRGSVTATGGPMLNPSVEPTARRESVQFRLDSENGTPQHPATRSSQDR-------GNDSSDMGDGGSTTSLPNASDPATSAAAVDARNQRRSIGLKRLSVNDHMKESLVLAQEAINQNDGTAITTSGLEKLQDIMTEAKEKGLGVSKLFHFFLAQSELSDRRGSTRSILGLLEKSALVPEETAENGDGSGTGGVYKETQSSKTRAEASKRNSNSKKKSMELMPSLQKGKRPSTASSKRGSG-----SATGSARGPPASARENDPGSRGGAGGGSTASGSRSSLARRSSSLEEAMVRDRQITPFSFQAGLTTLGFKTTDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVRRGVQTNATGAEADRELDKAARDMANETVNGGDGEEGGGGAGGMGRLDAPVTLGKVVYKGDKFFWRTKELIEVVIQLNARVGFMAIPSNAAAVAGLLEDLKTKEMEAKKEAEMRRAGEGDGPESAETTAKKERRATEQS--QSLSEQAHMGYIADYLLHRITMPDQDGHILQPDMTQPGVEVNPSLSSPGGDVGNQEGEKRVSGNRGVVAARRPGLMRTTFDEWDTLLFPKPPSRVADRPKFA-AKKRDSYFEDFQHKKEEFDDNRIRAHRLSAEAAAYTEEV 629
            M  R+ S  ATGG M+NPSVEP +RRES Q R DSE    +  A  SS++        G DS+     GS   LP   D  TSAAA+ ARNQRRSIGLKRLSVN HMK+SL+   E + ++    + T+G+EKLQ IMTEAKEKGLGVS LFHFFL QSE   R    R     LE S    E  AE  +G  TGG++K+T+SSKTRA+A + + +  + S ELMPSL+KG RPSTA+SKR S      +A   +     S++ +DP ++   G  ST+   RSS++RRSS  EEAM+RDR IT  SFQ GL TLGF  + EETA++FD+LD N +G IDL EFTRFCLEIPSM WKAER RRG+  N  G + DREL+KAARDMANETV+  D  EGG G G + +L+  V LGK+ Y+G+KFFWRTK+LIEVV+QLN   GF+AIP++AAA A +L DLK K + AK E  M     G G    E+ A KE+   +Q   Q+LSE+AHM YIADY++HRITMPD +G++LQPD+T+P  EVNP L  P G  G+  G       RG  AAR PGLMRTTFDEWDTLLFP PPSRV   PKFA  KKR+SYF++F    E+F++NR+RA RLS EAAA+  +V
Sbjct:    1 MAPRKASACATGGRMINPSVEPASRRESAQERRDSEGRARRASARASSRESHKRPSAGGRDSASKN--GSLV-LPQGGDSTTSAAALQARNQRRSIGLKRLSVNTHMKDSLINTLEDVARDVRMGLQTTGIEKLQTIMTEAKEKGLGVSNLFHFFLLQSEGGKRESMERKASSSLETSGETMEPVAEKREGV-TGGLFKDTESSKTRAKAVRTSKSGNRASTELMPSLKKGARPSTANSKRTSSDPAMNTARDESSNASGSSQIDDPATK--EGDSSTSGRRRSSMSRRSSLAEEAMMRDRLITSASFQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLG-GELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMG----GSGSRGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDGNGNLLQPDVTRPEEEVNPGL--PAGGEGSSTGSGATKTKRGSAAAR-PGLMRTTFDEWDTLLFPNPPSRVEGVPKFAETKKRESYFQEFCSVTEKFEENRVRAQRLSGEAAAFAMQV 630          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: A0A6H5JYN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN0_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 7.570e-49
Identity = 144/315 (45.71%), Postives = 186/315 (59.05%), Query Frame = 0
Query:    1 MVARRGSVTATGGPMLNPSVEPTARRESVQFRLDSENGTPQHPATRSSQDRGNDSSDMGDGGSTTS----LPNASDPATSAAAVDARNQRRSIGLKRLSVNDHMKESLVLAQEAINQNDGTAITTSGLEKLQDIMTEAKEKGLGVSKLFHFFLAQSELSDRRGSTRSILGLLEKSALVPEETAENGDGSGTGGVYKETQSSKTRAEASKRNSNSKKKSMELMPSLQKGKRPS-TASSKRGSGSATGSARGPPASARENDPGSRGGAGGGSTASGSRSSLARRSSSLEEAMVRDRQITPFSFQAGLTTLGFKTTDE 310
            M  R+ S  ATGG M+NPSVEP +RRES Q R DSE    +  A  SS++     S  G   ++ S    LP   D  TSAAA+ ARNQRRSIGLKRLSVN HMK+SL+   E + ++    + T+G+EKLQ IMTEAKEKGLGVS LF+FFL QSE   R    R     LE      E  AE  +G+ TGG++K+T+SSKTRA+A++  +     S EL+  L + +  S +A       +   SA G   S++ +DP ++   G  ST+       +  SS  EEAM+RDR IT  SFQ GLTTLGFK + E
Sbjct:    1 MAPRKASACATGGRMINPSVEPASRRESAQERRDSEGRARRASARASSRESHKRPSAGGRDSASKSESLLLPQGGDSTTSAAALQARNQRRSIGLKRLSVNTHMKDSLINTLEDVARDVRMGLQTTGIEKLQTIMTEAKEKGLGVSNLFYFFLLQSEDGKRESMERKASSSLETPGETMEPVAEKREGA-TGGLFKDTESSKTRAKAARSRA-----STELVDRLNRRRYLSISAIMVEQCATIVVSAAG---SSQVDDPATK--EGDSSTSGRXXXXXSXXSSLAEEAMMRDRLITSASFQHGLTTLGFKISTE 304          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: D7FJC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC1_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.330e-16
Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
Query:  564 MRTTFDEWDTLLFPKPPSRVADRPKFA-AKKRDSYFEDFQHKKEEFDDNRIRAHRLSAEAAAYTEEV 629
            MRTTFDEWDTLLFP PPSRV   PKFA  KKR+SYF++F    E+F++NR+RA RLS EAAA+  +V
Sbjct:    1 MRTTFDEWDTLLFPNPPSRVEGVPKFAETKKRESYFQEFCSVTEKFEENRVRAQRLSGEAAAFAMQV 67          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 5.910e-14
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 0
Query:  288 DRQITPFSFQAGLTTLG---FKTTDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVRRGVQTNATGAEADRELDKAARDMANETVNGGDGEEGGGGAGGMGRLDAPVTLGKVVYKGDKFFWRTKELIEVVIQLNARVGFMAI 435
            +  +TP  F++ L  LG   F   + E   L    D + NG ++L EF  FCL IPS+ W+AE+ RR        AE+  EL+ AAR +A    +                L A V +G++V++G +FFWR+KE I+V + LNA  G M I
Sbjct:  140 EASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR-----LNNAESKDELNVAARKIARRRSS----------------LRA-VPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTI 268          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: A0A7S2BJX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.320e-8
Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 0
Query:  290 QITPFSFQAGLTTLG---FKT-TDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVRRGVQTNATGAEADRELDKAARDMANETVNGGDGEEGGGGAGGMGRLD-----------APVTLGKVVYKGDKFFWRTKELIEVVI 424
            +I P  FQ GL  LG    KT T++E +E+F  LDD+  G ID+ EF   C  IP +AWKAE++R   +   +  +A +  ++ A ++   T +G  G         M  L+           A +   +V+Y+G K FWRT E I++V+
Sbjct:   53 EIGPLDFQEGLAALGPAITKTITEDELSEIFQDLDDDGGGTIDVDEFKAHCYNIPRLAWKAEKIRFEREKTKSIEDAAKMAEREATNLP-LTPSGSTGAI-------MHALEDHRHQKDSAAAANMQSKEVIYEGTKLFWRTHEKIDIVM 194          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN)

HSP 1 Score: 67.0 bits (162), Expect = 4.360e-8
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  288 DRQITPFSFQAGLTTLGFKTTDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVRR 351
            D  ITP  F+A +  LG+  +  E A L D  D++KNG + + EF  +CL IP++AWKAE++RR
Sbjct:   26 DDDITPDDFEAAMKKLGWSISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLRR 89          
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 9.220e-8
Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 0
Query:  307 TTDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVRR---GVQTNATGAEADREL--DKAARDMANETVNGGDGEEGGGGAGGMGRLDAP-----VTLGKVVYKGDKFFWRTKELIEVVIQLNARVGFMAI 435
            TT +      +  D + +G I+L+EF R+CL+I +MAWKAERVRR   G  +   G   D E+  D+AA  MA E                  +   P       LG ++Y+G K FWRT E + + +  N     +AI
Sbjct:  125 TTSQLFGVFLETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVA----------------QAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAI 247          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig983.17545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G5R3_ECTSI3.000e-18554.35EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JYN0_9PHAE7.570e-4945.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJC1_ECTSI5.330e-1665.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSJ9_ECTSI5.910e-1435.76EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2BJX7_9STRA2.320e-833.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XWQ4_AURAN4.360e-845.31EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
D8LCP2_ECTSI9.220e-833.09EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 288..332
e-value: 2.4E-6
score: 27.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 307..342
score: 11.612
NoneNo IPR availableGENE3D1.10.238.10coord: 287..340
e-value: 1.1E-9
score: 40.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 320..332
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 288..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig983contigS-latissima_F_contig983:16280..39590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig983.17545.1mRNA_S-latissima_F_contig983.17545.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig983 16280..39590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig983.17545.1 ID=prot_S-latissima_F_contig983.17545.1|Name=mRNA_S-latissima_F_contig983.17545.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=632bp
MVARRGSVTATGGPMLNPSVEPTARRESVQFRLDSENGTPQHPATRSSQD
RGNDSSDMGDGGSTTSLPNASDPATSAAAVDARNQRRSIGLKRLSVNDHM
KESLVLAQEAINQNDGTAITTSGLEKLQDIMTEAKEKGLGVSKLFHFFLA
QSELSDRRGSTRSILGLLEKSALVPEETAENGDGSGTGGVYKETQSSKTR
AEASKRNSNSKKKSMELMPSLQKGKRPSTASSKRGSGSATGSARGPPASA
RENDPGSRGGAGGGSTASGSRSSLARRSSSLEEAMVRDRQITPFSFQAGL
TTLGFKTTDEETAELFDRLDDNKNGQIDLTEFTRFCLEIPSMAWKAERVR
RGVQTNATGAEADRELDKAARDMANETVNGGDGEEGGGGAGGMGRLDAPV
TLGKVVYKGDKFFWRTKELIEVVIQLNARVGFMAIPSNAAAVAGLLEDLK
TKEMEAKKEAEMRRAGEGDGPESAETTAKKERRATEQSQSLSEQAHMGYI
ADYLLHRITMPDQDGHILQPDMTQPGVEVNPSLSSPGGDVGNQEGEKRVS
GNRGVVAARRPGLMRTTFDEWDTLLFPKPPSRVADRPKFAAKKRDSYFED
FQHKKEEFDDNRIRAHRLSAEAAAYTEEVRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair