prot_S-latissima_F_contig980.17530.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig980.17530.1
Unique Nameprot_S-latissima_F_contig980.17530.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length140
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig980.17530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig980contigS-latissima_F_contig980:46859..47278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig980.17530.1mRNA_S-latissima_F_contig980.17530.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig980 46859..47280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig980.17530.1 ID=prot_S-latissima_F_contig980.17530.1|Name=mRNA_S-latissima_F_contig980.17530.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=140bp
VVWVQSLCPGFQPLRRFVKASTPPSKNPSPPPSPPPPSPPMVIRRLSLVG
VPRPVRCRLAGLEALPSALACALALALALAALLLPLSRRLCGAMFPKARG
TSRAIRAAWGPALPTLMRWEKEREVEGAAAATAAASAPDS
back to top