prot_S-latissima_F_contig98.17519.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig98.17519.1
Unique Nameprot_S-latissima_F_contig98.17519.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length314
Homology
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.560e-24
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 0
Query:  158 VNPSVQED--------ASVKTTVSVSANAYDTR---LADNNGCGNTGCLPELTRDS--NTKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTS-SGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEVQLL 305
            V+P  +ED        A  KTTV V+A AYD R    A + GCG  GCLP+L  D       ESRWSC++ +    G C I +TFD PQD+  + +AF KGDERTR +KV  +G ++G + S  G T  F ++ +    V ++ + + G+  +DW+S+ EV+ +
Sbjct:  238 VSPPEEEDDNNAEFVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFM 399          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.060e-21
Identity = 69/187 (36.90%), Postives = 97/187 (51.87%), Query Frame = 0
Query:  124 NGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASV--KTTVSVSANAYDTRLADNNGCGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            N  C   E  TG    + D+    Y+       +  P+V     V  KT V VS+ A+D R  D+ GCG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG+ERTR ++V  +G    T  S  D   F    + A DVS++ L +  L  ++W+S+ EV
Sbjct:   48 NASC-FGEETTGSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGDD-GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEV 231          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.060e-21
Identity = 80/275 (29.09%), Postives = 123/275 (44.73%), Query Frame = 0
Query:   39 CDPVHDCDEGFCHIRFSFSNHGQDCEDCAQCNLTKEECIDGFCRPDDGVECAALGAACSNSVPCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASV--KTTVSVSANAYDTRLADNNG------CGNTGCLPELTRDS-NTKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            C  V    +G+C    +    G D  DC  C        D  C  D   +C    AAC                     ++  + NG  + +  R+ +P +       EY+       +  P+V +   V  KT VSVSA A+D R   ++G       G  GC     RD  +T+IESRWSC+  L   EG C IE++F EPQ+++ + +AF KG+ER R ++V  +G    T  S  D+  F    + A + +++ L +  L  N+W+S+ EV
Sbjct:   55 CGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAFFDCKDPSAACFG-------------------EETAMGNG--DDSTGRSSDPDT-------EYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADST-FNTLGVTANEANTVMLESVSLLSNEWISLIEV 300          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.640e-21
Identity = 79/233 (33.91%), Postives = 113/233 (48.50%), Query Frame = 0
Query:   79 GFCRPDDGVE-CAALGAACSNSVPCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASV--KTTVSVSANAYDTRLADNNGCGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            G+C  ++  E CA  G  C       +  +D     E  T +    N  C   E  TG    + D+    Y+       +  P+V     V  KT V VS+ A+D R  D+ GCG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG+ERTR ++V  +G    T  S  D   F    + A DVS++ L +  L  ++W+S+ EV
Sbjct:  253 GWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASC-FGEETTGSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGDD-GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEV 482          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.380e-19
Identity = 89/298 (29.87%), Postives = 126/298 (42.28%), Query Frame = 0
Query:   21 EETCAVLDGECYTNGLLCCDPVHDCD------EGFCHIRFSFSNHGQDCEDCAQCNLTKEECIDGFCRPDDG-VECAALGAACSNSVPCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASVKTTVSVSANAYDTR---LADNNGCGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            E  C      C  +  +  D V +C        G+C    +    G D  DC  C        D  C  + G  +C    A+C    P  S +          TDD  ++  F    E+              E    VDG  +V          KT V VS+ A+D R    + + GCG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG+ERTR ++V  +G    T  S  D   F    + A DVS++ L +  L  ++W+S+ EV
Sbjct:  243 EFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTGSDD--------FSTDDQPMSYEFVPWEET--------------EALPTVDGAVEVG--------TKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEV 509          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 4.850e-19
Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 0
Query:  165 DASVKTTVSVSANAYDTRLADNNG---CGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            +   K  V VSA A+DTR  +++G   CG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG++RTR + V  +G    T  S  D+  F    + A + S++ L +  L  ++W+S+ EV
Sbjct:   22 EVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDST-FNTLGVTANEASTVMLESTALLSDEWISLIEV 167          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 6.390e-19
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  193 GCLPELTRDS--NTKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTS-SGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEVQLL 305
            GCLP+L  D       ESRWSC++ +    G C I +TFD PQD+  + +AF KGDERTR +KV  +G ++G + S  G T  F ++ +    V ++ + + G+  +DW+S+ EV+ +
Sbjct:    2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFM 117          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 3.870e-17
Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 0
Query:  165 DASVKTTVSVSANAYDTR---LADNNGCGNTG---CLPELTRDSNTK-IESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSITEV 302
            +   KT V VSA A+D R    +D+ GCG  G   C    TRD     IESRWSC+  L   EG C IE++F EPQ+V+ + +AF KG+ERTR + V  +G    T  S  D+  F    + A + S++ L +  L  ++W+S+ EV
Sbjct:  460 EVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADST-FNTLGVTATEASTVMLESVALLSDEWISLLEV 605          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: D7FL19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL19_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.020e-16
Identity = 72/228 (31.58%), Postives = 99/228 (43.42%), Query Frame = 0
Query:   39 CDPVHDCDEGFCHIRFSFSNHGQDCEDCAQCNLTKEECIDGFCRPDDGV-ECAALGAACSNSVPCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASVKTTVSVSANAYDTRLADNNGCGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRL 259
            CD +     G+C    +      D  DC +C        D  C  + G+  C    A+C          E+     +  TDD  ++  F    E+              E    VDG  +V          KT V VS+ A+D R  D+ GCG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG+ERTR ++V    SRL
Sbjct:    5 CDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFG--------EETTGSDDFSTDDQPMSYEFVPWEET--------------EALPTVDGAVEVG--------TKTEVGVSSTAHDVRPGDD-GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVRATPSRL 201          
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 7.240e-16
Identity = 69/196 (35.20%), Postives = 95/196 (48.47%), Query Frame = 0
Query:   79 GFC-RPDDGVECAALGAACSNSVPCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDLCVDGICKVNPSVQEDASV--KTTVSVSANAYDTRLADNNG---CGNTG---CLPELTRDSN-TKIESRWSCSKSL--GEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRVKVLGDGSRLGTF 262
            G+C R ++  EC   G  C +       ++D +   E  + D    N  C   ES   +  ST D     Y+       +  P+V     V  KT V VSA A+D R   ++G   CG  G   C    TRD   ++IESRWSC+  L   EG C IE+TF EPQ ++ + +AF KG+ERTR ++V    SRL T 
Sbjct:  176 GWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDE-PMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTI 370          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig98.17519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5J8U9_9PHAE2.560e-2439.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F4_ECTSI1.060e-2136.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S3_ECTSI2.060e-2129.09LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4F9_ECTSI5.640e-2133.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3F4_ECTSI1.380e-1929.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI77_ECTSI4.850e-1938.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCQ5_ECTSI6.390e-1938.14Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI3.870e-1739.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL19_ECTSI3.020e-1631.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB04_9PHAE7.240e-1635.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 165..310
e-value: 1.9E-7
score: 33.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..313
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.859

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig98contigS-latissima_F_contig98:199165..210873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig98.17519.1mRNA_S-latissima_F_contig98.17519.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig98 197893..211051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig98.17519.1 ID=prot_S-latissima_F_contig98.17519.1|Name=mRNA_S-latissima_F_contig98.17519.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=314bp
MFNQSVLLTLLALVVATAAGEETCAVLDGECYTNGLLCCDPVHDCDEGFC
HIRFSFSNHGQDCEDCAQCNLTKEECIDGFCRPDDGVECAALGAACSNSV
PCCSTEEDCIVPPELDTDDNFLNNGFCEVAESRTGEPCSTADNCRFEYDL
CVDGICKVNPSVQEDASVKTTVSVSANAYDTRLADNNGCGNTGCLPELTR
DSNTKIESRWSCSKSLGEGNCYIEYTFDEPQDVISMNIAFHKGDERTRRV
KVLGDGSRLGTFTSSGDTLDFENWTLNAKDVSSIKLVARGLRYNDWLSIT
EVQLLDKNYASSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf