prot_S-latissima_F_contig98.17518.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig98.17518.1
Unique Nameprot_S-latissima_F_contig98.17518.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length126
Homology
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: D7FTB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB8_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.650e-51
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSS 88
            PTGLGLKTTWNLLWTWSKPHIQYSSLL WQKVNHFPNSRELTRKDLLNKH+SRFMAPGGRLAKEFHIMPQTFVLPHEFT FV+AFTSS
Sbjct:  728 PTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHVSRFMAPGGRLAKEFHIMPQTFVLPHEFTLFVSAFTSS 815          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A6H5L5P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 4.170e-39
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELT-----------RKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSS 88
            PTGLGLKTTWNLLWTWSKPHIQYSSLL WQKV    + R ++            K+LLNKH+SRFMAPGGRLAKEFHIMPQTFVLPHEFT FV+AFTSS
Sbjct:  963 PTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVITVLSVRSMSATDGKHPRPSLNKNLLNKHMSRFMAPGGRLAKEFHIMPQTFVLPHEFTLFVSAFTSS 1061          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A7S3HSG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSG6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.490e-35
Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTS 87
            P+GLGL  +WN+LWTWSKP I+ + LLVWQKVNH+P+S+ELTRKDLL K+I R+   GG+  + F+IMP TF+LPHE+T FV AFT+
Sbjct:   84 PSGLGLGLSWNILWTWSKPRIKLNHLLVWQKVNHYPDSKELTRKDLLKKNIQRYTVMGGKGGENFNIMPMTFLLPHEYTAFVQAFTA 170          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A662WHA2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHA2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.660e-32
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERG 96
            P+GLGLKTTWNLLWTWSKP ++  +LL WQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+  FV AF + G   RE G
Sbjct:  755 PSGLGLKTTWNLLWTWSKPRVERQTLLTWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGRLRQAFDIIPPTFILPKEYVAFVQAFQARGERLRESG 850          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A662X3H0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3H0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.850e-32
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERG 96
            P+GLGLKTTWNLLWTWSKP ++  +LL WQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+  FV AF + G   RE G
Sbjct:  311 PSGLGLKTTWNLLWTWSKPRVERQTLLAWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGRLRQAFDIIPPTFLLPKEYVAFVQAFQARGERLRESG 406          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A225V5E3_9STRA (Tubulin-tyrosine ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V5E3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.380e-32
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTRDN 102
            P+GLGLKTTWNLLWTWSKP ++  +LLVWQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+  FV AF       ++ G S   N
Sbjct:   74 PSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYIAAGGRLRQAFDIIPPTFLLPKEYVAFVQAFQERSERLKQSGASETKN 175          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: W2PH88_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PH88_PHYPN)

HSP 1 Score: 127 bits (320), Expect = 1.070e-31
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTRDN 102
            P GLGLKTTWNLLWTWSKP ++  +LLVWQKVNHF +++ LTRKD L KHI +++A GG+L + F I+P TF+LP E+ +FV AF   G   +  G S   N
Sbjct:  711 PAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGKLRQAFDIIPPTFLLPKEYVSFVQAFQERGERLKRSGLSEAKN 812          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: D0N8L1_PHYIT (Tubulin polyglutamylase, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0N8L1_PHYIT)

HSP 1 Score: 125 bits (315), Expect = 1.290e-31
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTRDN 102
            P+GLGLKTTWNLLWTWSKP ++  +LLVWQKVNHF +++  TRKD L KHI +++A GG+L + F I+P TF+LP E+ +FV AF       R  G S   N
Sbjct:   74 PSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKAFTRKDCLKKHIGKYLAAGGKLRQAFDIIPPTFLLPKEYVSFVQAFQERSERLRRNGVSEAKN 175          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A833RXR8_PHYIN (Tubulin-tyrosine ligase family n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RXR8_PHYIN)

HSP 1 Score: 126 bits (316), Expect = 3.680e-31
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTRDN 102
            P+GLGLKTTWNLLWTWSKP ++  +LLVWQKVNHF +++ LTRKD L KHI ++++ GG+L + F I+P TF+LP E+ +FV AF       R  G S   N
Sbjct:  712 PSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLSAGGKLRQAFDIIPPTFLLPKEYVSFVQAFQERSERLRRNGVSEAKN 813          
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Match: A0A329RHQ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RHQ2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.690e-31
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    1 PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKHISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTRDN 102
            P+GLGLKTTWNLLWTWSKP ++  +LLVWQKVNHF +++ LTRKD L KH+ +++A GGRL + F I+P TF+LP E+ +FV AF       +  G S   N
Sbjct:  723 PSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHVGKYLAAGGRLRQAFDIIPPTFLLPKEYVSFVQAFQERSERLKRSGFSEAKN 824          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig98.17518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTB8_ECTSI1.650e-5195.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5P9_9PHAE4.170e-3973.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3HSG6_9STRA6.490e-3563.22Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A662WHA2_9STRA1.660e-3259.38Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662X3H0_9STRA2.850e-3259.38Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A225V5E3_9STRA4.380e-3255.88Tubulin-tyrosine ligase n=1 Tax=Phytophthora megak... [more]
W2PH88_PHYPN1.070e-3155.88Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
D0N8L1_PHYIT1.290e-3154.90Tubulin polyglutamylase, putative n=3 Tax=Phytopht... [more]
A0A833RXR8_PHYIN3.680e-3154.90Tubulin-tyrosine ligase family n=3 Tax=Phytophthor... [more]
A0A329RHQ2_9STRA3.690e-3154.90Uncharacterized protein n=2 Tax=Phytophthora cacto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 29..87
e-value: 1.3E-8
score: 34.3
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePROSITEPS51221TTLcoord: 1..126
score: 11.889
NoneNo IPR availablePANTHERPTHR12241TUBULIN TYROSINE LIGASE-RELATEDcoord: 1..86
NoneNo IPR availablePANTHERPTHR12241:SF155coord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig98contigS-latissima_F_contig98:151533..156183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig98.17518.1mRNA_S-latissima_F_contig98.17518.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig98 151533..156185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig98.17518.1 ID=prot_S-latissima_F_contig98.17518.1|Name=mRNA_S-latissima_F_contig98.17518.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=126bp
PTGLGLKTTWNLLWTWSKPHIQYSSLLVWQKVNHFPNSRELTRKDLLNKH
ISRFMAPGGRLAKEFHIMPQTFVLPHEFTTFVAAFTSSGHCGRERGKSTR
DNDYPAYVGVDSLDDIESREGREYRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam