prot_S-latissima_F_contig98.17515.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig98.17515.1
Unique Nameprot_S-latissima_F_contig98.17515.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length514
Homology
BLAST of mRNA_S-latissima_F_contig98.17515.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 4.290e-15
Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0
Query:   32 ADSSGVDFPLDTNGDVMTLLAELLSN-QHAFFAGVSTGWRNAWGDLPKSTQAITADTSVSQLQWSFDGGLVKGLTLCEEIAKHCDVEILKYAHSNRC 127
            A ++ VD PLD N D++  LA+ + + QH FFAGVST WR AWG  P ST+AIT   + SQL WSF  GL K   +CE IA    +E+LK A   +C
Sbjct:   24 AAAAAVDNPLDANVDIVRCLADFVHDEQHLFFAGVSTLWREAWGRRPTSTRAITEHVTPSQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRARELKC 120          
BLAST of mRNA_S-latissima_F_contig98.17515.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 9.460e-11
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   58 QHAFFAGVSTGWRNAWGDLPKSTQAITADTSVSQLQWSFDGGLVKGLTLCEEIAKHCDVEILKYAHSN-RCWLSQEVVVEAAARGHLEMVQW 148
            Q+ FFAGVS  WR+AW   P +T+A+TADT V QL  SF+ GL +  T+C++IA    +++L  A     C   ++    A+  GH ++++W
Sbjct:    8 QYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYASENGHADVLRW 99          
BLAST of mRNA_S-latissima_F_contig98.17515.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.470e-7
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   37 VDFPLDTNGDVMTLLAELLS-NQHAFFAGVSTGWRNAWGDLPKSTQAITADTSVSQLQWSFDGGLVKGLTLCEEIAKHCDVEILKYAHSNRC 127
            +D  L    DV + L E +   Q  FFAGV   W+ AWG  P +T+A+T DT+V+QL  +F  GL     +C  +AK   +++L+ A  + C
Sbjct:    1 MDAALFAQSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARRHGC 92          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig98.17515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFW3_ECTSI4.290e-1549.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8W5_ECTSI9.460e-1139.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8V2_ECTSI2.470e-736.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 99..510
e-value: 3.2E-17
score: 64.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 164..395
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 326..510
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 326..510
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 106..341
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 106..341
coord: 243..429
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 243..429
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 377..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig98contigS-latissima_F_contig98:41023..43178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig98.17515.1mRNA_S-latissima_F_contig98.17515.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig98 41018..44353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig98.17515.1 ID=prot_S-latissima_F_contig98.17515.1|Name=mRNA_S-latissima_F_contig98.17515.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=514bp
MASSQVKIARSGRSQERQRTGTSASGDEATEADSSGVDFPLDTNGDVMTL
LAELLSNQHAFFAGVSTGWRNAWGDLPKSTQAITADTSVSQLQWSFDGGL
VKGLTLCEEIAKHCDVEILKYAHSNRCWLSQEVVVEAAARGHLEMVQWTL
GQYPSWRKMLCTAAATGGSLGILKWAHANDCPWDSTTCSGAAGSGHLDIL
RWARSENCPWDSRTCSKGAEGGHLGIVEWARAHGCPWDTTTCSSAAAGGH
LEMLQWARANGANWSAATTFRAAEGGHLELLQWARAQGCPFGPYGCEGAI
KHGHLDTLEWLVANGCLMSRGSSSVAAEHGHLHILEWMRATDFDWVDPNI
CSVAAAGGHLGVLEWARANGSYWDGEVCSEAARHGHFEVLKWARYNRCPW
DQDTCAAAVEAGRLDILKWARAQGCPWDSELCAVSSSVDNFEVLKWAQRN
GCPWSEDTCASAAAAGRLDILQWARAEGCAWDSRTYREAERWGHEDVMHW
ARLNGCPGCGEDC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf