prot_S-latissima_F_contig975.17504.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig975.17504.1
Unique Nameprot_S-latissima_F_contig975.17504.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length298
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig975.17504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..297
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.649
NoneNo IPR availableTMHMMTMhelixcoord: 201..223
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig975contigS-latissima_F_contig975:96712..98907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig975.17504.1mRNA_S-latissima_F_contig975.17504.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig975 96662..101529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig975.17504.1 ID=prot_S-latissima_F_contig975.17504.1|Name=mRNA_S-latissima_F_contig975.17504.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=298bp
MPPSWGTVCDRWGWVVPALLLVSSLGYDYLLPDVDPNLSGNAFSAVGKIW
TAEDLSSMAGSGTMAAAVTCLTDAAHEPGAAALKLDEIKALIDGRTAADI
RAAVFRVTHGGTRDKFANFARNTNAAATCSTAGTAGWNGLDACLAGCEQK
SHFLAWTPNKGACHVLCALATSPCTKAVAAGTITMRPVSWGTMVTDWSET
WALVFCQTVHMVLFPLFVANMVINCLTMKARWREAEKELEMSEIDCDWWI
SFHDAMRDLDALEIAMDSRAHDGQLPASRRARLRREEGSVRLARRRD*
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