prot_S-latissima_F_contig975.17498.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig975.17498.1
Unique Nameprot_S-latissima_F_contig975.17498.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length388
Homology
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BLAST of mRNA_S-latissima_F_contig975.17498.1 vs. uniprot
Match: D7FXX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX9_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 2.300e-45
Identity = 106/224 (47.32%), Postives = 134/224 (59.82%), Query Frame = 0 
Query:    5 LSACAKRDRGSQAEYGRVWDALVSCTEGILGSRRGAVIEQKLGTVTFVSRPLREDAPTTRHQGCAFVANSKFIRTFSLIQRAPPQKSSLLAPVVRLSQARIGHAAGVDNDRARVVLASIFGAIGRKACSGAKLRLPFGSVGWIVAKDRTLTFSFGGRFRRPQSGPRTEQDEYDGHVRRILADIEARSSSSSGVFNNTIINSSTSPLPGGGTARSLVRPETCPSA 228
            +SACAK++R S+++Y RVW ALV C E +L S RGA IE KLGTVT++SR                     F R FS+IQRAPPQ+S LLAP V +S AR+GH AGVD+D  RV L +I   IGR+ CSG+ L LPFG +G +V K+RTL+F F   FR P++     Q +YD  VRRILA IEA++ +                 P GG   S  RPET PS+
Sbjct:    4 ISACAKQNRSSKSKYQRVWRALVLCAEEVLASGRGATIE-KLGTVTYISR---------------------FARAFSVIQRAPPQRS-LLAPAVSISSARVGHTAGVDHDYTRVALGAIVDWIGRRVCSGSNLSLPFGRLGTLVGKERTLSFVFADGFRPPKT--MAVQGKYDRDVRRILAAIEAKAKADPHE-------------PPGGEHASTTRPETSPSS 189
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig975.17498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXX9_ECTSI2.300e-4547.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig975contigS-latissima_F_contig975:47922..77449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig975.17498.1mRNA_S-latissima_F_contig975.17498.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig975 33330..77449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig975.17498.1 ID=prot_S-latissima_F_contig975.17498.1|Name=mRNA_S-latissima_F_contig975.17498.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=388bp
MHSFLSACAKRDRGSQAEYGRVWDALVSCTEGILGSRRGAVIEQKLGTVT
FVSRPLREDAPTTRHQGCAFVANSKFIRTFSLIQRAPPQKSSLLAPVVRL
SQARIGHAAGVDNDRARVVLASIFGAIGRKACSGAKLRLPFGSVGWIVAK
DRTLTFSFGGRFRRPQSGPRTEQDEYDGHVRRILADIEARSSSSSGVFNN
TIINSSTSPLPGGGTARSLVRPETCPSATQWGRRAGTRENQPNNNRTSLP
VGKKGSSITRKGGGLQPLQAHQPHSTAGRGLGRGRRQRKGDAQKARHTED
RVPTASQEGTSRGSGAGVGRRDRGKPKPGQGLPEGPPSGRGKVGGKAGWG
PRVAGGGAGAGWDRGGVGAGAGVGFPRERRIRFSRTF*
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