prot_S-latissima_F_contig975.17496.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig975.17496.1
Unique Nameprot_S-latissima_F_contig975.17496.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length328
Homology
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: D7FSU8_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSU8_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.390e-66
Identity = 116/180 (64.44%), Postives = 136/180 (75.56%), Query Frame = 0
Query:    8 SRKVLEEVVHATAGGVDFWRLDEPTWWYLLGLLALQVLGREVFKRYGPFKDDAALFVHQVA--FCLRPHCRSGALHGW-GEPGTVGAGLW-PTVGPVFREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRA 183
             RK   E V A AG V+FW L+EPT WY +GLLALQV+GREVFKRYGPFK DAALF HQ+    C+  HC    ++ W GE  T+   L+ P+VG +   K   VNLAFQFYDL+AT FIG++ K EM+VHH L+T+MCYFLMRDCYVHYYAIFFLGISEVSS+PLVFVD+FKFFP V A
Sbjct:    2 GRKKAAEAVVAAAG-VNFWTLEEPTLWYAVGLLALQVVGREVFKRYGPFKSDAALFAHQLCSMVCIA-HCAFWGVYYWFGEANTIEDRLYGPSVGALVIGK---VNLAFQFYDLVATVFIGRLCKVEMIVHHALATVMCYFLMRDCYVHYYAIFFLGISEVSSVPLVFVDVFKFFPDVAA 176          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A835YYL5_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.000e-28
Identity = 67/155 (43.23%), Postives = 91/155 (58.71%), Query Frame = 0
Query:   28 LDEPTWWYLLGLLALQVLGREVFKRYGPFKDDAALFVHQVA--FCLRPHCRSGALHGWGEPGTVGAGLWPTV--GPVFREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFF 178
            ++ PT+ +LL L   Q+  + V  + GPF  D ALF HQV   F        G  + + E   V   L+  +   PV       +NLAFQ +D  AT  I  +RKPEM+VHHTL+ L+ +F++RD Y HYYA FFLG++EVS+IPL  VD+FK F
Sbjct:    9 MENPTFVWLLFLTTCQIFTQVVASKRGPFVSDPALFAHQVCAFFATCAIGGYGTYYWYTEANDVHDRLYDVMVGAPVVTH----INLAFQIFDFFATLLIADLRKPEMVVHHTLAVLLAFFVLRDAYGHYYACFFLGMTEVSAIPLCIVDVFKHF 159          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S3XQI7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQI7_HETAK)

HSP 1 Score: 93.2 bits (230), Expect = 3.000e-18
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 0
Query:   30 EPTWWYLLGLLALQVLGREVFKRYGPFKDDAALFVHQVA--FCLRPHCRSGA-LHGWGEPGTVGAGLWPTVGPVFREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLM--RDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRARGGRQRADADCFCRSF 199
            E T  ++LGL  +      VFK+ GPFK    +  HQ+   FC+      GA L  +G    V   L+  +GP   EK + +NLAFQ +D + T    ++ +  +++ H      C FL      Y+HYY +F+ G SE+S++PLVFVD+FK+FP+V    G +    D  C++ 
Sbjct:   31 ELTVQWILGLTVIYSTSNYVFKKSGPFKTKPGVAAHQLCALFCILYCAYYGATLWFFGGMIEVEDRLYQNIGPA--EKLIKINLAFQTFDFVTTFLDKQMHQRSIMLAHHFVAGSCAFLSVYHATYLHYYMVFYTGCSEISTVPLVFVDLFKYFPKV----GEKVPTFDLICKAL 199          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S0SRD6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SRD6_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 2.290e-16
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  101 FREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRAR 184
            F  K +  N AFQ +D   + F  ++  PEML HH L+ LMCY+ +   Y+HYYAI+F+G+ E+SS+PLV VDI K++P ++ R
Sbjct:   96 FAVKVMQANFAFQVWDFSVSLFHRELNSPEMLTHHALAALMCYWGLTMPYMHYYAIYFMGVVEISSVPLVLVDICKYYPELQRR 179          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S0WBE8_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WBE8_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 5.050e-15
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   99 PVFREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRV-RARGGRQRADADCFCRSF 199
            P    + + VNLAFQ +D L +    ++  PEML HH L+  +C   +   +V YY I+FLG++EVSS+PLV+VD  KF+P + RAR G   A    F  SF
Sbjct:   15 PESGRQMILVNLAFQLWDFLISLNRKELNSPEMLAHHALAATLCAIGLHIGFVQYYGIYFLGVTEVSSLPLVYVDAAKFYPEMQRARPGMDLAFKVMFGLSF 116          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: C1MM19_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MM19_MICPC)

HSP 1 Score: 82.8 bits (203), Expect = 1.380e-14
Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 0
Query:   36 LLGLLALQVLGREVFKRYGP--FKDDAALFVHQVAFCLRP--HCRSGALHGW----GEPGTVGAGLWPTVGPVFREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRAR 184
            L G+ AL ++   + +   P   +   A  +     CL P  +C       W    G   T  A L+ T     R   L  +LAF+ +D   + F   +R PEML HH L+ L+CY+ +   Y+HYYA++F+G++E+SS+PLV VD  K++P V  R
Sbjct:   27 LFGMTALFMVLHPILRTMFPRTMRARGAFLLAFELSCLFPLAYCAYEGYTTWTTGLGAFTTAKARLYATSPGAVRV--LQAHLAFEAWDFGVSFFNKTLRAPEMLAHHALAALLCYWALTMPYMHYYAVYFMGVAEISSVPLVLVDAGKYYPDVSKR 181          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S3XNJ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ4_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 2.770e-13
Identity = 52/161 (32.30%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   29 DEPTWWYLLGLLALQVLGREVFKRYGPFKDDAALFVHQVAFCLRP-HCRS-GALHGWGEPGTVGAGLWP-TVGPVFR----EKDLF-VNLAFQFYDLLATGFIGKI-RKPEMLVHHTLSTLMCYF-LMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFP 179
            D    W+L  +  + V+    F+  GPF+    L  HQ++  +   +C + G  H W    +    L+  ++  +++     +D+  V LAFQF++ L T F  ++  +P MLVHH ++  + +F      Y+HYY++F+ G+SE+SSIPLVFV++F++FP
Sbjct:   14 DTTVAWFL-AICLVHVVLLSAFRSRGPFQSKPWLATHQLSSLVGLIYCSAAGIAHMWSNEDSH---LFTNSIDRLYKFNMAGQDIAKVQLAFQFFNFLVTLFESELANRPVMLVHHAVTASLAWFGTYHATYLHYYSLFYYGLSEISSIPLVFVELFRYFP 170          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S2H2Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2Q2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.420e-10
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  108 VNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVR----ARGGRQRADA 192
            +  +FQ +DL+    I ++RKPEMLVHHTL T + + +     +H  ++FFLG+SE+  +PL FVD F   P         GG   A+A
Sbjct:   30 LQASFQVWDLVMALVIPELRKPEMLVHHTLVTYVAFAVFDQGVMHEPSLFFLGLSEIQGVPLTFVDFFTHIPPATFGLITEGGSSEAEA 118          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: A0A7S3TES5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TES5_9SPIT)

HSP 1 Score: 69.3 bits (168), Expect = 8.250e-10
Identity = 61/197 (30.96%), Postives = 91/197 (46.19%), Query Frame = 0
Query:    1 MRGLWLESRKVLEEVVHATAGGVDFWRLDEPTW--WYLLGLLALQVLGREVFKRY-GPFKDDAALFVHQVAFCLRPHCRSGALHG---WGEPGTVGAGLWPTVGPVFR-EKDLFVNLAFQF----YDLLATGFIGKIRKPEMLVHH--TLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRAR 184
            MRGL+ +       VV +    +  W      W   +  GLLALQ +   V      P  +D  +  HQ+   + P   + A HG   W       A      G ++   +D F    F F    +DL+ T  +  +RK E LVHH  TL+T +C   +   Y+ Y A FF G+ E+SS+PLVFVD+F+ +P +  +
Sbjct:    1 MRGLFSKPXXXXXXVVPS----LTLWEAFNDPWVQQWAFGLLALQAVLMVVLSIIPSPMSEDVGVAAHQLTIAV-PFAYA-AYHGARLWFFDEAFAAMGTSAHGRLYAASEDCFSLTRFMFGMQVFDLMVTFIVPSMRKLEHLVHHGLTLATALCG--LSGPYLMYQAGFFFGLVEISSVPLVFVDLFRKYPALHEK 189          
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Match: K8EC96_9CHLO (TLC domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EC96_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 8.500e-10
Identity = 28/72 (38.89%), Postives = 49/72 (68.06%), Query Frame = 0
Query:  108 VNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCYVHYYAIFFLGISEVSSIPLVFVDIFKFFP 179
            V +AFQ +D + + F  ++   EML+HH ++ L+CY+++   Y+ +Y ++F+G+ E SS+PL  VD  +FFP
Sbjct:  113 VQIAFQAWDFVISLFNSELNSVEMLLHHAMTGLLCYWMLTIPYMAWYGVYFMGVCETSSLPLSVVDFMRFFP 184          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig975.17496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSU8_ECTSI2.390e-6664.44TLC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YYL5_9STRA3.000e-2843.23TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3XQI7_HETAK3.000e-1834.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0SRD6_9CHLO2.290e-1646.43Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S0WBE8_9CHLO5.050e-1543.14Hypothetical protein (Fragment) n=2 Tax=Ostreococc... [more]
C1MM19_MICPC1.380e-1433.76Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S3XNJ4_HETAK2.770e-1332.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H2Q2_9STRA1.420e-1039.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3TES5_9SPIT8.250e-1030.96Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
K8EC96_9CHLO8.500e-1038.89TLC domain-containing protein n=1 Tax=Bathycoccus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 108..177
e-value: 7.8E-6
score: 25.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..327
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..130
NoneNo IPR availableTMHMMTMhelixcoord: 150..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig975contigS-latissima_F_contig975:11876..25907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig975.17496.1mRNA_S-latissima_F_contig975.17496.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig975 11876..26936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig975.17496.1 ID=prot_S-latissima_F_contig975.17496.1|Name=mRNA_S-latissima_F_contig975.17496.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=328bp
MRGLWLESRKVLEEVVHATAGGVDFWRLDEPTWWYLLGLLALQVLGREVF
KRYGPFKDDAALFVHQVAFCLRPHCRSGALHGWGEPGTVGAGLWPTVGPV
FREKDLFVNLAFQFYDLLATGFIGKIRKPEMLVHHTLSTLMCYFLMRDCY
VHYYAIFFLGISEVSSIPLVFVDIFKFFPRVRARGGRQRADADCFCRSFH
PPARHLLALHCRRSPLGHLRIRAGGHRAQRRSCRLLHDLQPVADAAPVVL
GLPHLAGGGQDAVGRQERQEAQKAVTGPDRTGPGCLLLCSFDKKSRSASC
WPERVAGRFLFVLGLREDRSWGFLFDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom