prot_S-latissima_F_contig972.17479.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig972.17479.1
Unique Nameprot_S-latissima_F_contig972.17479.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length425
Homology
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BLAST of mRNA_S-latissima_F_contig972.17479.1 vs. uniprot
Match: D7FP11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP11_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 1.490e-155
Identity = 241/414 (58.21%), Postives = 287/414 (69.32%), Query Frame = 0 
Query:   36 ILWTGVWTLLNRHMPGGTGLWKELGLAVVGAWVMFWTRSLFSNAGMDSLDYEGSLSEMGALLSQGRLLWRDKAKFYAKSILAIIGSILFWDGVYTLFDEHAWESTLMYNGACAGLGGAGVVWAMTSEEDDQEDEMDRFA--LAGVRSAIEGEAGSDFSRLSPRQKAGLYGKALFCNVCSVVFWKGVEEIIEDSGPDTAWTGLLYFLVGVLVLAGTRRLSSNSGLDDGLMLTGMAQASPVDESLDS--WDYK--HPFSRVGTSDAPRWRDC--RDVR--------------GGGEFRKPPFCATSFFDAPRNRRRC---PGWVTTAAELTSVVFAWTGIEWYVWDDDYIADTWIRDLLYVGAGLATLIGTGTFFNLAGTISPLAVLKQQVHQHNRQEEALPLLSS-DEALIRPDT 423
            +LWTGVWTLL+RH+PGGTGLWKELGLAV GAW+M WTR+ FSNAGMDSLD EGSLSEMG+LL QGRL WRD+AKFYA+S+LAI+GSILFWDGVY L DEH WE TL YN  CA LGGAG+VW MTSE++D+    D      A + ++    +G   SRL P  +  LY KALFCNVC VVFWKGVEEIIED+GP+  WTGL++F++G+ +L  T RLS NSGL+DGL      QA P   ++++  WD    +P  R  +S +P   D    D+               GGG  R P  C      + R  R C   P WVTTAAELT VVFAWTGIEWYVW+ DYI D+ +RDL Y+  GL  L+GTGTFFNLAGTISP+A LKQ VHQHNR EEA+PLLS+ D+    PDT
Sbjct:    1 MLWTGVWTLLDRHVPGGTGLWKELGLAVAGAWIMVWTRTFFSNAGMDSLDQEGSLSEMGSLLVQGRLRWRDEAKFYARSLLAIVGSILFWDGVYDLCDEHTWEGTLTYNLVCASLGGAGMVWVMTSEDEDERMRGDDIGGGPAAMMASAANRSGGRSSRLGPGNRGRLYAKALFCNVCGVVFWKGVEEIIEDNGPNKDWTGLVFFVIGISILIATDRLSMNSGLEDGLPPAVDIQAGPAACTIETAAWDASSSNPDLRAPSS-SPLLLDVVVNDLSCPGCSRLVAAPTSFGGGNVRSP--CGGEGAGSRRRGRGCVEVPRWVTTAAELTGVVFAWTGIEWYVWEGDYIPDSALRDLGYIAVGLGILVGTGTFFNLAGTISPVAALKQ-VHQHNRHEEAMPLLSNFDQPETEPDT 410
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig972.17479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP11_ECTSI1.490e-15558.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 331..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 396..424
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 354..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 373..395
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 373..395
NoneNo IPR availableTMHMMTMhelixcoord: 59..76
NoneNo IPR availableTMHMMTMhelixcoord: 230..247
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 331..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig972contigS-latissima_F_contig972:42676..60355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig972.17479.1mRNA_S-latissima_F_contig972.17479.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig972 42676..60355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig972.17479.1 ID=prot_S-latissima_F_contig972.17479.1|Name=mRNA_S-latissima_F_contig972.17479.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=425bp
VGSRGECSFSSLSMLTRWGSCVDLLRGSLSWPGVVILWTGVWTLLNRHMP
GGTGLWKELGLAVVGAWVMFWTRSLFSNAGMDSLDYEGSLSEMGALLSQG
RLLWRDKAKFYAKSILAIIGSILFWDGVYTLFDEHAWESTLMYNGACAGL
GGAGVVWAMTSEEDDQEDEMDRFALAGVRSAIEGEAGSDFSRLSPRQKAG
LYGKALFCNVCSVVFWKGVEEIIEDSGPDTAWTGLLYFLVGVLVLAGTRR
LSSNSGLDDGLMLTGMAQASPVDESLDSWDYKHPFSRVGTSDAPRWRDCR
DVRGGGEFRKPPFCATSFFDAPRNRRRCPGWVTTAAELTSVVFAWTGIEW
YVWDDDYIADTWIRDLLYVGAGLATLIGTGTFFNLAGTISPLAVLKQQVH
QHNRQEEALPLLSSDEALIRPDTP*
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