prot_S-latissima_F_contig970.17468.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig970.17468.1
Unique Nameprot_S-latissima_F_contig970.17468.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length546
Homology
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BLAST of mRNA_S-latissima_F_contig970.17468.1 vs. uniprot
Match: D8LBI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI1_ECTSI)

HSP 1 Score: 536 bits (1381), Expect = 6.610e-184
Identity = 335/552 (60.69%), Postives = 391/552 (70.83%), Query Frame = 0 
Query:    1 MMNRGVLRVAALAQTRRIGAAALGVRSSGGGATADVGMKAWLSATPGSGESSNDNDEGPTPAETKLAFSSTVYGKDPASTAELTPAEVAAAAHLKQXXXXXXXXXKLSAATSRGHDARAMFDSSLSQQAEDGKSSGDIKRDVAADTPDATRVAFRASAYGKDPQMSAELSETEAAEMEELRARARGSSSGGAA--PVHDSRNMFDSDFAQGAGDARASGDIKRDVTADTPDATRVAFRASAYGKDPQMAAELSETEAAEVGALRARARG-SSGGAAPLHDDRNMFDSDFAHGAGVTRASGDIKRDVASDTPEATRVAFRASAYGKDAQGTAEHSAQEAAEVEAMRKLAARSPGAGAT----APVHDERSMFDSDLTHGAGSSRGSEAIKREVAADTPEATRLVFGGSDYGKDQESMARSAREQVEMDALAARSTKKEXXXXXXXXXXAAPIHDDRSMFDSELTQGAGIVRDSGAIKREVTAGTPDKTRLAFKGSDYGKDDPGGESAEGAEELATKQAKGEKLATVGRGARKSKVHDTKKAMADDEYSQAGSE 545
            M+ RG+ RVA  A++++  AA  GV++      A  G +AWLSAT G G+SS+ +D   TP +TKLAFSS+VYGKDPAS  E T  E AAAA LK+         +  AA +  HD R MFDSSLSQQAEDGK SG IKRDVAADTPDATRVAF A+AYGKDP+ +A LS  EA E+E LRARA+G    GAA  P+HD RNMFDSD  QGAG  +A   IKRDV  DTPDATRVAFRASAYGKDPQ AA LSE EAAEV ALR RA+G  +  AAP+HD R+MFDSD   GAG T+ S  IKR+V+ DTP+ATRVAFRAS YGKD Q  A  S QEAAEV+ +R    R+ GAGA+    APVHD RSMFDSDLT GAG+ +GS++IKR VAA+TPEATRLVF GSDYGKD  S+  S +++ E+ ALA R               AAPIH DRSMFDS+L +GAG  R+S AIKR V   TP  TRL+F GS YG DDPG   A+ A+ LA KQ KG KLA VG G + +KVH+T+KAMADDEYSQAGSE
Sbjct:    1 MLRRGIFRVAVYARSQKTCAA--GVKNL---PAAAAGTRAWLSATSG-GDSSDSDDV--TPPKTKLAFSSSVYGKDPASGGEPTAEEAAAAAQLKREAEAGTA--REGAAAAPVHDNRNMFDSSLSQQAEDGKESGSIKRDVAADTPDATRVAFGATAYGKDPEAAAALSAQEAEEVEALRARAKGDGVAGAAAAPLHDRRNMFDSDLTQGAGSTQAFDAIKRDVKTDTPDATRVAFRASAYGKDPQTAAALSEQEAAEVEALRMRAQGRGAAAAAPVHDSRSMFDSDLTQGAGSTQGSDSIKREVSGDTPDATRVAFRASVYGKDGQAAAALSEQEAAEVDELR---VRAHGAGASSADAAPVHDSRSMFDSDLTQGAGAMQGSDSIKRHVAANTPEATRLVFAGSDYGKDPRSVDNSEKKKAEIAALAER------VGAGTPAAAAAPIHHDRSMFDSDLAEGAGAARESTAIKRHVETATPALTRLSFFGSTYGDDDPGSNKADHAQALAEKQKKGAKLARVGAGVQSAKVHNTEKAMADDEYSQAGSE 533
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig970.17468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBI1_ECTSI6.610e-18460.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig970contigS-latissima_F_contig970:41877..44887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig970.17468.1mRNA_S-latissima_F_contig970.17468.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig970 41877..44887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig970.17468.1 ID=prot_S-latissima_F_contig970.17468.1|Name=mRNA_S-latissima_F_contig970.17468.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=546bp
MMNRGVLRVAALAQTRRIGAAALGVRSSGGGATADVGMKAWLSATPGSGE
SSNDNDEGPTPAETKLAFSSTVYGKDPASTAELTPAEVAAAAHLKQAAAA
AAGGGKLSAATSRGHDARAMFDSSLSQQAEDGKSSGDIKRDVAADTPDAT
RVAFRASAYGKDPQMSAELSETEAAEMEELRARARGSSSGGAAPVHDSRN
MFDSDFAQGAGDARASGDIKRDVTADTPDATRVAFRASAYGKDPQMAAEL
SETEAAEVGALRARARGSSGGAAPLHDDRNMFDSDFAHGAGVTRASGDIK
RDVASDTPEATRVAFRASAYGKDAQGTAEHSAQEAAEVEAMRKLAARSPG
AGATAPVHDERSMFDSDLTHGAGSSRGSEAIKREVAADTPEATRLVFGGS
DYGKDQESMARSAREQVEMDALAARSTKKESAAATAAAGGAAPIHDDRSM
FDSELTQGAGIVRDSGAIKREVTAGTPDKTRLAFKGSDYGKDDPGGESAE
GAEELATKQAKGEKLATVGRGARKSKVHDTKKAMADDEYSQAGSE*
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