prot_S-latissima_F_contig97.17451.1 (polypeptide) Saccharina latissima SLPER63f female
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Overview
Homology
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A6H5JR04_9PHAE (Small nuclear ribonucleoprotein Sm D1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR04_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.450e-64 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDGGRGRG 100
MKLVRFLMKMNNETVTVELKNGTTVHGTV+SVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDG RGRG
Sbjct: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVASVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDGARGRG 100
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A835YYQ8_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ8_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.140e-48 Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDG 95
MKLVRFLMK+NNETVT+ELKNGTTVHGTV+ VDV+MNTHLK VKVTPKG+N D+LSIRGNNIRCYILPDN+NLDQLLIDDAPK KPG K G
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTVHGTVAGVDVNMNTHLKGVKVTPKGRNTQDCDTLSIRGNNIRCYILPDNINLDQLLIDDAPKAKPGIPKAG 95
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A7S2FU32_9STRA (Small nuclear ribonucleoprotein Sm D1 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU32_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.340e-45 Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDGGRGRG 100
MKLVRFLMK+NNETVT+ELKNGT V GTV+ VDV+MNT++KNVKVT KGKN YD+LSIRGNNIR Y+LPD++NLD LLIDDAPKQK KV GGRG G
Sbjct: 22 MKLVRFLMKLNNETVTIELKNGTVVQGTVAGVDVAMNTYMKNVKVTVKGKNTVNYDTLSIRGNNIRYYLLPDSINLDALLIDDAPKQKAPKVAAGGRGPG 121
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: T0RK40_SAPDV (Small nuclear ribonucleoprotein Sm D1 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=T0RK40_SAPDV) HSP 1 Score: 150 bits (379), Expect = 3.870e-45 Identity = 73/88 (82.95%), Postives = 81/88 (92.05%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK 88
MKLVRFLMK++NETVT+ELKNGT VHGTV+ VD+SMNTHLK VK+T KGKNPT+ DSLSIRGNNIRCYILPD+LNLD LLIDD PKQK
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTVVHGTVTGVDISMNTHLKAVKMTVKGKNPTSLDSLSIRGNNIRCYILPDSLNLDTLLIDDTPKQK 88
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: W7T3T7_9STRA (Small nuclear ribonucleoprotein Sm D1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3T7_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.070e-44 Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK--PGKVKDGGRG 98
MKLVRFLMK+NNETVT+ELKNGTT+ GT+S VDVSMNT+LKNVKVT KGKNP +Y+SLSIRGNNIR YILPD LNLD LL+DD PK K PG + GGRG
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTIQGTISGVDVSMNTYLKNVKVTLKGKNPVSYESLSIRGNNIRYYILPDALNLDALLVDDGPKNKLKPG-AQAGGRG 99
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A7S2V5U0_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U0_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.850e-44 Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK--PGKVKDGGRG 98
MKLVRFLMK+NNETVT+ELKNGT VHGTV+ VDVSMNT+L+NVK+T K KNP + ++LSIRGNNIR Y+LPDNLNLD LLIDD PKQK PG GGRG
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTVAGVDVSMNTYLRNVKMTVKQKNPVSLETLSIRGNNIRYYLLPDNLNLDTLLIDDTPKQKVRPGVAMRGGRG 100
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A024TLD1_9STRA (Small nuclear ribonucleoprotein Sm D1 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLD1_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.460e-43 Identity = 72/88 (81.82%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK 88
MKLVRFLMK+ NETVT+ELKNGT VHGT+S VD+SMNTHLK VK+T KGKNPT+ DSLSIRGNNIR YILPD+LNLD LLIDD+PKQK
Sbjct: 1 MKLVRFLMKLTNETVTIELKNGTVVHGTISGVDISMNTHLKVVKMTVKGKNPTSLDSLSIRGNNIRYYILPDSLNLDTLLIDDSPKQK 88
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: K3WSY3_GLOUD (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY3_GLOUD) HSP 1 Score: 147 bits (370), Expect = 1.740e-43 Identity = 74/102 (72.55%), Postives = 87/102 (85.29%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK--PGKVKDGGRGRG 100
MKLVRFLMK++NETVT+ELKNGT VHGT++ VD+SMNTHLK+VK+T KGKNP + DSLSIRGNNIR YILPD+LNLD LLI+D P++K G GGRGRG
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKSVKMTVKGKNPVSLDSLSIRGNNIRYYILPDSLNLDTLLIEDTPREKVKAGAPAAGGRGRG 102
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A397E2M2_9STRA (Small nuclear ribonucleoprotein Sm D1 n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397E2M2_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.790e-43 Identity = 72/88 (81.82%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQK 88
MKLVRFLMK+ NETVT+ELKNGT VHGT+S VD+SMNTHLK VK+T KGKNPT+ DSLSIRGNNIR YILPD+LNLD LLIDD+PKQK
Sbjct: 32 MKLVRFLMKLTNETVTIELKNGTVVHGTISGVDISMNTHLKVVKMTVKGKNPTSLDSLSIRGNNIRYYILPDSLNLDTLLIDDSPKQK 119
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Match: A0A7S2SJR6_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJR6_9STRA) HSP 1 Score: 145 bits (367), Expect = 5.460e-43 Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDG 95
MKLVRFLMK+N ETVT+ELKNGT V GTV+ VDV+MNT++KNVK+T KGKN YDSLSIRGNNIR YILPDNLNLD LLIDD PK KP KV+ G
Sbjct: 23 MKLVRFLMKLNKETVTIELKNGTVVQGTVAGVDVAMNTYMKNVKLTVKGKNTVHYDSLSIRGNNIRYYILPDNLNLDTLLIDDTPKAKPPKVQTG 117 The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig97.17451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-latissima_F_contig97.17451.1 ID=prot_S-latissima_F_contig97.17451.1|Name=mRNA_S-latissima_F_contig97.17451.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=102bpback to top |