prot_S-latissima_F_contig963.17399.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig963.17399.1
Unique Nameprot_S-latissima_F_contig963.17399.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length66
Homology
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: D7G8T5_ECTSI (Dynein heavy chain family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T5_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.340e-9
Identity = 32/35 (91.43%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            M ALMDYIRVTTTRLNVEVD LDSLRYVM VLKEV
Sbjct: 1179 MAALMDYIRVTTTRLNVEVDNLDSLRYVMVVLKEV 1213          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A6H5KIA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA9_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.370e-9
Identity = 32/35 (91.43%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            M ALMDYIRVTTTRLNVEVD LDSLRYVM VLKEV
Sbjct: 1228 MAALMDYIRVTTTRLNVEVDSLDSLRYVMVVLKEV 1262          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A8K1FD29_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD29_PYTOL)

HSP 1 Score: 50.8 bits (120), Expect = 1.110e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+YIRVTTT+LN  VD LDSLR+VM VL+E+
Sbjct: 1136 LTNLMEYIRVTTTKLNTVVDSLDSLRFVMGVLREI 1170          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A067CR94_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CR94_SAPPC)

HSP 1 Score: 49.7 bits (117), Expect = 2.840e-5
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T L DYIR+TTT+LN +V+ LDSLRYVM VLKEV
Sbjct: 1144 LTNLSDYIRLTTTKLNRDVESLDSLRYVMLVLKEV 1178          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: K3WB71_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB71_GLOUD)

HSP 1 Score: 49.7 bits (117), Expect = 2.840e-5
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+YIRVTT +LN +V+ LDSLR+VM VLKE+
Sbjct: 1149 LTNLMEYIRVTTIKLNTQVESLDSLRFVMGVLKEI 1183          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A3L6V6W9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V6W9_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.270e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+Y+RVT T+LN +V+ LDSLRYVM VLKEV
Sbjct:   33 LTNLMEYMRVTNTKLNRDVESLDSLRYVMMVLKEV 67          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A397AXD5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AXD5_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.290e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+Y+RVT T+LN +V+ LDSLRYVM VLKEV
Sbjct: 1158 LTNLMEYMRVTNTKLNRDVESLDSLRYVMMVLKEV 1192          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A6A5A7C5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A7C5_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.300e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+Y+RVT T+LN +V+ LDSLRYVM VLKEV
Sbjct: 1002 LTNLMEYMRVTNTKLNRDVESLDSLRYVMMVLKEV 1036          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A485LDP6_9STRA (Aste57867_19083 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDP6_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.320e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LMDY+R+T ++LN EV+ LDSLRYVM VLKEV
Sbjct: 1172 LTNLMDYMRLTNSKLNREVESLDSLRYVMMVLKEV 1206          
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Match: A0A024UAF2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAF2_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.320e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEV 35
            +T LM+Y+RVT T+LN +V+ LDSLRYVM VLKEV
Sbjct: 1174 LTNLMEYMRVTNTKLNRDVESLDSLRYVMMVLKEV 1208          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig963.17399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G8T5_ECTSI2.340e-991.43Dynein heavy chain family n=1 Tax=Ectocarpus silic... [more]
A0A6H5KIA9_9PHAE2.370e-991.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FD29_PYTOL1.110e-568.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CR94_SAPPC2.840e-571.43Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
K3WB71_GLOUD2.840e-565.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3L6V6W9_9STRA5.270e-568.57Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397AXD5_9STRA5.290e-568.57Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A5A7C5_9STRA5.300e-568.57Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LDP6_9STRA5.320e-568.57Aste57867_19083 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UAF2_9STRA5.320e-568.57Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availableTMHMMTMhelixcoord: 38..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig963contigS-latissima_F_contig963:788..985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig963.17399.1mRNA_S-latissima_F_contig963.17399.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig963 770..1015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig963.17399.1 ID=prot_S-latissima_F_contig963.17399.1|Name=mRNA_S-latissima_F_contig963.17399.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=66bp
MTALMDYIRVTTTRLNVEVDGLDSLRYVMNVLKEVLKSFYFVLFLVFSLW
AINITTEFFFSFHFY*
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