prot_S-latissima_F_contig962.17394.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig962.17394.1
Unique Nameprot_S-latissima_F_contig962.17394.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length231
Homology
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 2.420e-118
Identity = 189/230 (82.17%), Postives = 202/230 (87.83%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYATQPATLPVEPSIVPASAGPTGVDEYGLPVGPAPAAAQEVRL 230
            MKRVFGKKK+ GPAPSLS+AGGRVDERV KI     GLDQEL+KYR ALKKAKGPTATNIK+RAME LKRKKMYE QRDQ+AGQQFNIEQT FAIDSIKDTATTVAAMKDASKTLKA++KKIDINKVED+TDDMA      NEINDIMGRSYNVG+ELDEDDLDAELACLDDELDALEGLEEDTGPSY  QPA+LP EPS+VP S GPTGVDE+GLPV PAPA   + R 
Sbjct:   75 MKRVFGKKKEKGPAPSLSEAGGRVDERVAKIXXXXXGLDQELVKYRNALKKAKGPTATNIKKRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSYNVGDELDEDDLDAELACLDDELDALEGLEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEFGLPVNPAPARPAQERF 304          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA)

HSP 1 Score: 254 bits (648), Expect = 7.090e-82
Identity = 148/228 (64.91%), Postives = 170/228 (74.56%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYATQPATLPVEPSIVPASAGPT-------GVDEYGLPVGPA 221
            M R+FGKKKDV P PSL+DA GR+D RV  +DEKI  LD EL KY+  LKKAKGPTA NIKRRAME LKRKKMYEQQRDQ+AGQ FNIEQTSFAIDSIKDT TTVAAMKDA+KTLKAE KK++I+++ED              IND+MGR+Y + +E+DE DLDAELACL+DEL+ LE  E +  PSY  QPA +PVEPS VPA A          GVD +GLPV PA
Sbjct:   27 MNRIFGKKKDVAPPPSLTDASGRIDSRVQAMDEKIAKLDLELRKYKEQLKKAKGPTAANIKRRAMETLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAYGMPDEVDEADLDAELACLEDELEGLEEGETEAAPSYL-QPAGMPVEPSAVPAGAPAADAAAEADGVDAFGLPVAPA 253          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.480e-77
Identity = 142/229 (62.01%), Postives = 166/229 (72.49%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYATQPATLPVEPSIVPASAGPT--------GVDEYGLPVGPA 221
            M R+FGKKK   PAPSLSDA GR+D+RV+ +                    AKGPTA NIKRRAM+ LKRKKMYEQQRDQ+AGQ FNIEQTSFAIDSIKDT TTVAAMK A+ TLKAE KK++I+ +ED  DD+ DMMEDMNEIN++MGRSY V +E+DE+DLDAELACLDDEL+ +E  EE    SY   PA LPVEPS  PA A P+        G+D++GLPV PA
Sbjct:    1 MNRIFGKKKPTAPAPSLSDASGRIDQRVSAVXXXXXXXXXXXXXXXXXXXXAKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSYGVPDEMDEEDLDAELACLDDELEGIEAGEEAEA-SYLG-PAGLPVEPSAEPAGANPSAALPADGGGMDDFGLPVAPA 227          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.610e-71
Identity = 129/198 (65.15%), Postives = 150/198 (75.76%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALE--GLEEDTGPSYATQPATLP 196
            M R+FGKKKD GPAPSLSDAG RVDER   +DEKIK LDQELL+++ AL KAKG  A NIKRRAME LKRKKMYE QRDQ+AGQQFNIEQT+F IDSIKDT TTV AMK A+K +K+E KK++I+++ED  DD+A     MNEINDIMGRSYNVG+E+DE DLDAELAC           G+++D G   AT     P
Sbjct:    1 MNRIFGKKKDTGPAPSLSDAGARVDERTRNLDEKIKVLDQELLRHKHALAKAKGQAAVNIKRRAMETLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSYNVGDEIDEADLDAELACXXXXXXXXXELGIDDDAGGITATAGTARP 198          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI)

HSP 1 Score: 215 bits (547), Expect = 6.040e-67
Identity = 126/228 (55.26%), Postives = 159/228 (69.74%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTG---PSYATQP-------ATLPVEPSIVPASAGPTGVDEYGLPV 218
            M R+FGKKK+V P P L +    ++ RV  +DEKIK  D EL  Y+T + KAKGP    I+RRA+E LKRKKMYEQQRDQ+ GQ FN++Q +FA+++IKDT TTVAAMKDA+K LK E  KID+N++EDL DD+ADM EDMNEI++ +GRSY   + +DEDDL+AELACL DE D  E L E+     PSY +         A LPV     P +  P+GVDE+GLPV
Sbjct:    1 MHRLFGKKKEVAPPPDLGETSKGLNGRVAALDEKIKAADNELRVYKTQIAKAKGPAKAGIQRRAVEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTTVAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSYGTPDYIDEDDLEAELACLGDEFD--EELTEEVSLEQPSYLSPSGMPHVPAAGLPVPTIAQPQAPQPSGVDEFGLPV 226          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.890e-66
Identity = 126/221 (57.01%), Postives = 158/221 (71.49%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDA-LEGLEEDTGPSYA--TQPATLPVEPSIVPASAGPTGVDEYGLPV 218
            MKR+FG+KKDV P P+L DAG +VD RV  +DEKIK L+ EL  Y+  LK+A+GP    +K+RAM  LKRKKMYEQQRDQ+AGQ FNIEQT+F IDS+KDT TTV AMK ASKTLK E KK++I+K++DL D         NE+ D++GRSY+VGE++DE DLDAEL  L D+LDA LE  + D+ P+Y    +P  LP E       A  + VDE+GLPV
Sbjct:   10 MKRIFGQKKDVAPPPTLGDAGAKVDSRVAALDEKIKKLEVELSGYKEKLKRARGPAQKTLKQRAMGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSYDVGEDIDEADLDAELEALGDDLDAELELDDADSTPAYLQPAEPTNLP-EXXXXXXXAPESAVDEFGLPV 229          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: F0Y671_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y671_AURAN)

HSP 1 Score: 208 bits (529), Expect = 1.590e-64
Identity = 117/205 (57.07%), Postives = 146/205 (71.22%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYA--TQPATLPVEPSIVP 203
            MKR+FG KK + P P+L DA  +++ R   +DEKIK               AKGP A  +K+RAM  LKRKKMYE QRDQ+AGQ FN+EQTSFAIDS+KDT TTV AMK ASKTLK E KK+DI+++ED+ DD+ADMMEDMNE+ D +GRSY +G+++DE DLDAELACLDDEL   E   ED+ P+Y     P  LP +P+ +P
Sbjct:    1 MKRIFGAKKSLPPPPTLGDASAKLETRTAGLDEKIKXXXXXXXXXXXXXXXAKGPAAKTLKQRAMAVLKRKKMYEAQRDQLAGQAFNVEQTSFAIDSVKDTLTTVDAMKAASKTLKTEFKKVDIDQIEDVQDDLADMMEDMNEVQDALGRSYGIGDDVDEADLDAELACLDDELGMDELGLEDSTPAYLQPADPGALPEQPTNLP 205          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.800e-63
Identity = 117/223 (52.47%), Postives = 156/223 (69.96%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYA--TQPATLPVEPSIVPASAGPTGVDEYGLPVGPA 221
            M+R+FG +K   PAPSL DA  R+DER T +DEKI+ LD EL  Y+  LKKA+G     +KRRAM  L+RK+MYEQQRDQ+AGQ FN+EQT+FAIDS+KDT TTV AMK ASKTLK EVKK+D++++EDL DD+A        + D++G+SY +G+++D+ DLDAEL  L D+ D +   + D  P+Y     P+ +P +P+  P  A    VDE+GLPV  A
Sbjct:    1 MRRIFGARKAKAPAPSLGDASQRLDERTTALDEKIRKLDIELAGYKEKLKKARGAAQQTLKRRAMGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSYGIGDDIDDADLDAELDALGDDFDDV--ADADATPAYLQPADPSLMPDQPTDAPVQAD--DVDEFGLPVAAA 219          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: W4HCB2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCB2_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.870e-61
Identity = 116/223 (52.02%), Postives = 154/223 (69.06%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYATQP---ATLPVEPSIVPASAGPTGVDEYGLPVGP 220
            M R+FGKKK   P  +++D  GRV+ RV  +D KI  L++EL KYR  + KAKGP  T+IK+RA++ LKRKKMYEQQRD +A Q FNIEQ SFAI++ KD+  TV+AMK A+  LKAE KK +  ++E++ DDMADMM+DMNEI +I+GRSY VG+++DE +L+AEL  L+DE      +EE   P +A        LP  P+ V  +    GVDEYGLP+ P
Sbjct:    1 MNRIFGKKKPEAPQVNITDVHGRVEGRVDNLDMKISKLEEELQKYRQQMAKAKGPALTSIKQRALQTLKRKKMYEQQRDSMAAQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMDDMNEIQEILGRSYGVGQDIDESELEAELEGLEDEW----AMEEAVAPQHAAPSYLATDLPAAPTGVKDTPTAAGVDEYGLPLAP 219          
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.210e-60
Identity = 118/221 (53.39%), Postives = 151/221 (68.33%), Query Frame = 0
Query:    1 MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALKKAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKDTATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGLEEDTG-PSYATQPATLPVEPSIVPASAGPTGVDEYGLPVGP 220
            M R+FGKKK   P   + D  GRVD RV  +D KI  L++ELLKYR  + KAKG   T+IK+RA++ LKRKKMYEQQRD +A Q FNIEQ SFAI++ KD+  TV+AMK A+  LKAE KK +  ++E++ DDMADMMEDMNEI +I+GRSY +G+++DE +L+AEL  L+DE    E +   T  P+Y      LP  PS        TGVDEYGLP+ P
Sbjct:    1 MNRIFGKKKPEAPPVDIGDVRGRVDGRVETLDMKIAKLEEELLKYRQQMAKAKGAALTSIKQRALQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMEDMNEIQEILGRSYGLGQDVDESELEAELEGLEDEWAMEEAIAPATSAPAYLA--TDLPAAPSGQKDKPQATGVDEYGLPMAP 219          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig962.17394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ1_ECTSI2.420e-11882.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FVB6_9STRA7.090e-8264.91Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2AMY1_9STRA1.480e-7762.01Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZMU4_9STRA2.610e-7165.15Snf7 family n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A812Y1R2_SYMMI6.040e-6755.26CHMP5 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3K2P3_9STRA1.890e-6657.01Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y671_AURAN1.590e-6457.07Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4EE62_9STRA3.800e-6352.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W4HCB2_9STRA3.870e-6152.02Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485L0R2_9STRA2.210e-6053.39Aste57867_14479 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availableGENE3D1.10.287.1060coord: 25..96
e-value: 3.9E-9
score: 38.2
NoneNo IPR availablePANTHERPTHR22761:SF12CHARGED MULTIVESICULAR BODY PROTEIN 5coord: 1..198
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..198
IPR005024Snf7 familyPFAMPF03357Snf7coord: 14..180
e-value: 5.2E-45
score: 153.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig962contigS-latissima_F_contig962:116371..121201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig962.17394.1mRNA_S-latissima_F_contig962.17394.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig962 116299..121813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig962.17394.1 ID=prot_S-latissima_F_contig962.17394.1|Name=mRNA_S-latissima_F_contig962.17394.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=231bp
MKRVFGKKKDVGPAPSLSDAGGRVDERVTKIDEKIKGLDQELLKYRTALK
KAKGPTATNIKRRAMECLKRKKMYEQQRDQVAGQQFNIEQTSFAIDSIKD
TATTVAAMKDASKTLKAEVKKIDINKVEDLTDDMADMMEDMNEINDIMGR
SYNVGEELDEDDLDAELACLDDELDALEGLEEDTGPSYATQPATLPVEPS
IVPASAGPTGVDEYGLPVGPAPAAAQEVRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam