prot_S-latissima_F_contig961.17385.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig961.17385.1
Unique Nameprot_S-latissima_F_contig961.17385.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length606
Homology
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: D8LL88_ECTSI (Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL88_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 2.680e-102
Identity = 159/176 (90.34%), Postives = 168/176 (95.45%), Query Frame = 0
Query:  429 VPTATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQNEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            VPT TCKVLVVGNAKCGKSSIISRFV++RFSSDYNST+GADYAMKDV L +GRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLW QNEGC+LPVYLFANKCDLL EVQDSFLAGARMEKTCRD+GFAGW+ITSAKRGDNID AMT L+E A+E
Sbjct:  347 VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSLENGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEKTCRDAGFAGWHITSAKRGDNIDTAMTSLVEHALE 522          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 5.650e-75
Identity = 120/173 (69.36%), Postives = 144/173 (83.24%), Query Frame = 0
Query:  430 PTATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQNEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDA 602
            PT TCKVLVVGNAKCGK+SII R+V+ RF+S+Y +T+GADY  KDV   DG  VRLQLWDIAGQDRFA+LTRAYFRRA+ AVVVCD+TREGT++A+ RWK+E+D+W   EGC++PV+L ANKCDLLT+ Q+SFL GA+MEKTCR+  F  WYITSAK GDNI  AM+ LL  A
Sbjct:  361 PTVTCKVLVVGNAKCGKTSIIQRYVHGRFTSEYTTTVGADYLKKDVLAPDGTCVRLQLWDIAGQDRFARLTRAYFRRARAAVVVCDITREGTYEAVSRWKDELDVWCTTEGCKIPVFLIANKCDLLTDAQESFLMGAKMEKTCREKNFEAWYITSAKGGDNIATAMSNLLVKA 533          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: W7U2E0_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2E0_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.640e-63
Identity = 107/178 (60.11%), Postives = 132/178 (74.16%), Query Frame = 0
Query:  429 VPTATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQNEGCE--LPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            VP + CK+LVVGNAKCGK+S+I RFV   F + Y ST+GADY  +DV L+DGR VRLQLWDIAGQDRF  LTR YF RAKG +VVCD+TRE TF+A+  WK EID W++ EG E  +PV L ANKCD+LT+  DSF+AGA M   C +  FA WY+TSAK G N++ A   L+E A++
Sbjct:  227 VPVSICKLLVVGNAKCGKTSVIRRFVQGNFKNAYVSTVGADYLKRDVILKDGRPVRLQLWDIAGQDRFVHLTRVYFTRAKGVLVVCDLTREKTFEAVRSWKLEIDEWARTEGREGGIPVVLIANKCDMLTDAADSFVAGANMASMCHEQKFASWYVTSAKSGSNVETAFLDLVERAMD 404          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: K3X7B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7B8_GLOUD)

HSP 1 Score: 186 bits (472), Expect = 7.630e-50
Identity = 93/176 (52.84%), Postives = 122/176 (69.32%), Query Frame = 0
Query:  431 TATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            T   KVL+VGNA+CGK+S I +FV+ +FS +Y STIGAD+  K +      ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DAIV WK EIDL S+  N+G  +PV + ANK DLL +   +   G  M+K    +G   W+ TSAK GD++D+A   L++  +E
Sbjct:  123 TVIMKVLIVGNARCGKTSTIRQFVSKQFSENYVSTIGADFVEKIIEYDAQLKISLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRENTIDAIVNWKSEIDLCSRDLNDGESIPVVMVANKSDLLDDPVGALNIGVNMQKCVVKNGIVEWFRTSAKNGDSVDDAFKCLIDRMVE 298          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: H3GIE7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIE7_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 1.200e-49
Identity = 94/185 (50.81%), Postives = 118/185 (63.78%), Query Frame = 0
Query:  422 VSQRPQAVPTATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            VS     V T   KVL+VGNA+CGK+S I RF  D F+ +Y STIGAD+  K +   D   + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK EID   +  NEG E+PV L ANK DLLT+   +   G  M+K    +    W+  SAK G+++D+A   LL+  +E
Sbjct:  119 VSSSSDDVETVIMKVLIVGNARCGKTSTIRRFTRDDFNEEYVSTIGADFVEKVIEYDDQLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVTWKNEIDTCCKDLNEGAEIPVVLVANKSDLLTDPMGALDLGVNMQKCVDKNNIVEWFRASAKSGEHVDDAFQCLLDRMVE 303          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: A0A662X9X8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9X8_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.710e-48
Identity = 96/194 (49.48%), Postives = 118/194 (60.82%), Query Frame = 0
Query:  413 GGGGSVGGVVSQRPQAVPTATCKVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            G GG    V S     V T   KVL+VGNA+CGK+S I RF  DRF  +Y STIGAD+  K V   D   + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK EID   +  N G E+PV + ANK DLL +   +   G  M+K    +    W+  SAK G++I EA   L++  +E
Sbjct:  115 GSGGEEESVESSSTDDVETVIMKVLIVGNARCGKTSTIRRFTQDRFCEEYVSTIGADFVEKLVEYDDRLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNAGAEIPVVMVANKSDLLVDPMGALDLGVNMQKCVTKNNIVEWFRASAKNGESIGEAFQCLIDRMVE 308          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: A0A8K1FMK4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMK4_PYTOL)

HSP 1 Score: 179 bits (455), Expect = 6.860e-48
Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 0
Query:  435 KVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            KVLVVGNA+CGK+S I RFV+ +FS  Y STIGAD+  K +   D  ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TR  T DA+  WK E+D+  +  N G  +PV + ANK DLL +   +   G  M+K+   +G   W+  SAK G++IDEA   L+E  ++
Sbjct:   97 KVLVVGNARCGKTSTIRRFVSKQFSDHYVSTIGADFVEKVIDYDDSLRLHLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRANTIDAVETWKNELDVCCKDLNHGETIPVVMLANKSDLLQDPLSALNLGVNMQKSVTRNGIVEWFRASAKSGEHIDEAFQCLIEQMVQ 268          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: A0A2D4BRT2_PYTIN (Rab32/38 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRT2_PYTIN)

HSP 1 Score: 181 bits (458), Expect = 8.870e-48
Identity = 91/172 (52.91%), Postives = 118/172 (68.60%), Query Frame = 0
Query:  435 KVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIE 604
            KVLVVGNA+CGK+S I RFV+  FS +Y STIGAD+  K V   D  ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+V WK EID+  +  N G  +PV + ANK DLL +   +   G  M+K   ++G   W+  SAK G+++D+A   L+   +E
Sbjct:  139 KVLVVGNARCGKTSTIRRFVSKDFSDEYVSTIGADFVEKVVDYDDNLRLHLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTIDAVVTWKSEIDVCCKDLNHGEVIPVVMVANKSDLLQDPMGALNIGVNMQKCVVNNGIVEWFRASAKSGEHVDDAFQCLINRMVE 310          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: A0A3R7NCY6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NCY6_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.760e-47
Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = 0
Query:  435 KVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLEDAIEV 605
            KVL+VGNA+CGK+S I RF  D F+ +Y STIGAD+  K +   D   + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T +A+  WK EID+  +  N+G E+PV + ANK DLL    D+   G  M+K    +    W+  SAK G+ + +A   L++  IE+
Sbjct:   61 KVLIVGNARCGKTSTIRRFTQDNFNEEYVSTIGADFVEKVIEYDDQLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIEAVENWKNEIDMCCKDLNDGTEIPVVMVANKSDLLVNPMDALDLGVNMQKCVAKNNIVEWFRASAKSGEKVPDAFQCLVDRMIEI 233          
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Match: G4ZV73_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZV73_PHYSP)

HSP 1 Score: 173 bits (438), Expect = 1.410e-46
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 0
Query:  435 KVLVVGNAKCGKSSIISRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQ--NEGCELPVYLFANKCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLE 600
            KVL+VGNA+CGK+S I RF  D F+ +Y STIGAD+  K +   +   + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK EID   +  NEG E+PV + ANK DLL +   +   G  M+K    +    W+  SAK G++I +A   L++
Sbjct:    2 KVLIVGNARCGKTSTIRRFTQDEFNEEYVSTIGADFVEKIIEYDEHLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKSDLLMDPMGALDLGVNMQKCVDKNKIVEWFRASAKSGEHIGDAFQCLID 169          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig961.17385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL88_ECTSI2.680e-10290.34Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CPW2_9STRA5.650e-7569.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U2E0_9STRA1.640e-6360.11Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
K3X7B8_GLOUD7.630e-5052.84Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GIE7_PHYRM1.200e-4950.81Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662X9X8_9STRA2.710e-4849.48Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8K1FMK4_PYTOL6.860e-4851.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BRT2_PYTIN8.870e-4852.91Rab32/38 family GTPase, putative n=1 Tax=Pythium i... [more]
A0A3R7NCY6_9STRA1.760e-4749.13Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
G4ZV73_PHYSP1.410e-4650.60Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 434..455
score: 34.42
coord: 580..602
score: 26.72
coord: 476..498
score: 39.19
coord: 457..473
score: 33.1
coord: 541..554
score: 39.01
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 436..601
e-value: 6.9E-7
score: -29.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 431..605
e-value: 3.9E-10
score: 28.3
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 434..605
e-value: 8.9E-44
score: 161.4
NoneNo IPR availableGENE3D3.40.50.300coord: 421..605
e-value: 4.4E-47
score: 161.9
NoneNo IPR availablePANTHERPTHR24073:SF839RAS-RELATED PROTEIN RAB-38coord: 431..602
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 431..602
NoneNo IPR availablePROSITEPS51419RABcoord: 426..605
score: 24.706
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 432..594
e-value: 6.5E-22
score: 76.0
IPR001806Small GTPasePFAMPF00071Rascoord: 435..602
e-value: 2.9E-37
score: 127.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 433..602

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig961contigS-latissima_F_contig961:155990..173141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig961.17385.1mRNA_S-latissima_F_contig961.17385.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig961 155990..173141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig961.17385.1 ID=prot_S-latissima_F_contig961.17385.1|Name=mRNA_S-latissima_F_contig961.17385.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=606bp
ICVSVRPRNCQSVQGLHRDRGHITTFSRLMKPQGKNKSRSPTRNRRQQQQ
HMMRLDALTIAGLTGAARSSGVGARVAVGTGASTSRGDRSRSPARSDATL
SSIEDSFKDGSSILSDELGEIVFTDDELDILEDDDGGDVATPNNGDRSSS
SSSEALDGVRLPPRGRLGSGEITRGEGRRGREECRKEGRAEAAATAAEEA
AEAAVAIGDNVRVSESLQPNDFLSSPTTAVAAAAVAAGGADHSALSTTTF
SAGKTGNGLPTPSNHSSSSGDILPTPQSSFRPPCATVPTTTATAAPPTPS
PRVSPHLLKPPPASTASPPVGQTQQQQAAVAVAAVATAPELEHHRRTVSS
SSGPSKATARSLAERSAPATGTTARRRQTGDGATLPKVSTSSRDRSHGSA
TAFSGVGASATSGGGGSVGGVVSQRPQAVPTATCKVLVVGNAKCGKSSII
SRFVNDRFSSDYNSTIGADYAMKDVHLRDGRQVRLQLWDIAGQDRFAKLT
RAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWSQNEGCELPVYLFAN
KCDLLTEVQDSFLAGARMEKTCRDSGFAGWYITSAKRGDNIDEAMTKLLE
DAIEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase