prot_S-latissima_F_contig961.17379.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig961.17379.1
Unique Nameprot_S-latissima_F_contig961.17379.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length178
Homology
BLAST of mRNA_S-latissima_F_contig961.17379.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 6.090e-43
Identity = 92/181 (50.83%), Postives = 117/181 (64.64%), Query Frame = 0
Query:    2 TYDALQNTTTFPNVLCSDDNIFLRCECHLSGHGSS----YLNWEGVDSTGTAMWTTSHAASTLWSFCSETESSITGSSSLASTDDGCARAKFLRLVCDEPLSDPEDEESMLDSLDDACGAETSELDPSSADYATIIGDAVRLLELNVSQVVPADDINTVCQHLLLAVMGSDDGGGSTEAAD 178
            TY A+QN +TFPNVLC D+N+F+RC+CHL     S    YL   GVD+TG AMW T H A+TL +FC+   S+++GSSS  S  D CA AKF+  VC  P    +      D+LDDACGA TSELD S+ADY + I  A+ LLE  VS  +PAD+I+  C+ L  AVM +DDG  + EA D
Sbjct:   83 TYGAMQNISTFPNVLCFDNNMFMRCDCHLDEDAYSAPGIYLTGLGVDTTGVAMWATQHDANTLIAFCTAAVSALSGSSSNTSPTDACAIAKFIFKVCHAPALGFDVSTMGSDTLDDACGAGTSELDFSAADYLSTIEFAIGLLESVVSLSIPADEISDTCETLTFAVMPADDGAAADEADD 263          
BLAST of mRNA_S-latissima_F_contig961.17379.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.450e-28
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 0
Query:    1 MTYDALQNTTTFPNVLCSDDNIFLRCECHLSGHG----SSYLNWEGVDSTGTAMWTTSHAASTLWSFCSETESSITGSSSLASTDDG-CARAKFLRLVCDEP---LSDPEDEESMLDSLDDACG-AETSELDPSSADYATIIGDAVRLLELNVSQVVPADDINTVCQHLLLAVMGSDDGGGSTEAAD 178
            +TY+ALQNTT  PNVLC D+N+F RC CH S        SYL+  G+  TG A+W T H + TL S C   E +++  +SL  TDD  C   KF+RL+C+     L D  DE   +  ++++CG   T  LD S+  Y T++ +AV L+  +    +PA +I++VC+ L  AVM +DDG  + EAAD
Sbjct:   66 VTYEALQNTTLSPNVLCYDNNVFHRCGCHRSTDDYEPPESYLSGAGIAFTGAAIWATQHDSDTLVSHC---ELALSAVASL--TDDVLCTGTKFVRLMCNSDEFMLGDALDE---IPEINESCGDGATESLDTSAQGYVTLMQEAVALMAADSDLSIPAAEIDSVCERLTFAVMPADDGAAAAEAAD 244          
BLAST of mRNA_S-latissima_F_contig961.17379.1 vs. uniprot
Match: D8LFQ4_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ4_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 3.030e-27
Identity = 77/191 (40.31%), Postives = 108/191 (56.54%), Query Frame = 0
Query:    1 MTYDALQNTTTFPNVLCSDDNIFLRCECHLSGHG----SSYLNWEGVDSTGTAMWTTSHAASTLWSFCSETESSITGSSSLASTDDG-CARAKFLRLVCDEPLSDPEDEESMLD-------SLDDACGAETSE-LDPSSADYATIIGDAVRLLELNVSQVVPADDINTVCQHLLLAVMGSDDGGGSTEAAD 178
            +TY+ALQNTT  PNVLC D+N+F RC CH S        SY++   +  T  A+W T H + TL S C   + ++   +SL  TDD  C   KF+RL+CD       DE  ML         +D++CG  T++ LD S   Y T++ DAV L+  +    +PA +I++VC+ L  AVM +DDG  + EAAD
Sbjct:   56 VTYEALQNTTVSPNVLCYDNNVFHRCGCHRSTDDYEPPESYVSGAAITFTAAAIWATQHDSDTLLSHC---QLALGAVASL--TDDALCTGTKFIRLMCDS------DEFRMLGLVLDEAPEIDESCGDGTTDSLDTSGQGYVTVMQDAVALMAADSDLSIPAAEIDSVCERLTFAVMPADDGAAADEAAD 235          
BLAST of mRNA_S-latissima_F_contig961.17379.1 vs. uniprot
Match: A0A6H5KQ87_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ87_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.120e-12
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   85 ARAKFLRLVCDEPLSDPEDEESMLDSLDDACGAETSELDPSSADYATIIGDAVRLLELNVSQVVPADDINTVCQHLLLAVMGSDDGGGSTEAAD 178
            ++ +F+  VCD P    +      D+L+DACGA TSE+D S+ADY + I  A+ LLE  VS  +PAD+IN  C+ L  AVM +DDG  + EA D
Sbjct:    8 SKLQFIFKVCDAPALGFDVSTMGPDTLNDACGAGTSEMDFSAADYLSTIEFAIDLLESVVSLSIPADEINDTCETLTFAVMPADDGAAADEADD 101          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig961.17379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZE9_ECTSI6.090e-4350.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZE8_ECTSI1.450e-2841.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFQ4_ECTSI3.030e-2740.31ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5KQ87_9PHAE4.120e-1245.74ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig961contigS-latissima_F_contig961:43828..49241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig961.17379.1mRNA_S-latissima_F_contig961.17379.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig961 43828..49261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig961.17379.1 ID=prot_S-latissima_F_contig961.17379.1|Name=mRNA_S-latissima_F_contig961.17379.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=178bp
MTYDALQNTTTFPNVLCSDDNIFLRCECHLSGHGSSYLNWEGVDSTGTAM
WTTSHAASTLWSFCSETESSITGSSSLASTDDGCARAKFLRLVCDEPLSD
PEDEESMLDSLDDACGAETSELDPSSADYATIIGDAVRLLELNVSQVVPA
DDINTVCQHLLLAVMGSDDGGGSTEAAD
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