prot_S-latissima_F_contig961.17374.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig961.17374.1
Unique Nameprot_S-latissima_F_contig961.17374.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length82
Homology
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A6H5KNW1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW1_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.010e-40
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+GSA+LSGFDVGKNPE IH+LVGYCPQFDALFETLTGREHL LYA++KGIP  KR AAV++KIEEMGL+QY+DRPAG YSG
Sbjct:  139 TTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSG 220          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 6.070e-39
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+GSA+LSGFDVGKNPE IH+LVGYCPQFDALFETLTGREHL LYA++KGIP  KR AAV++KIEEMGL+QY+DRPAG YSG
Sbjct: 1601 TTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSG 1682          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.200e-36
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+GSA L GFDVGKNPE IH+LVGYCPQFDALFETLTGREHL LYAA+KGIP  KR AAV +KIEEMGL +Y++RPAG YSG
Sbjct:  704 TTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSG 785          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.220e-36
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+GSA L GFDVGKNPE IH+LVGYCPQFDALFETLTGREHL LYAA+KGIP  KR AAV +KIEEMGL +Y++RPAG YSG
Sbjct: 1621 TTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSG 1702          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 9.150e-30
Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+G+A L G DVGK PEAIH+L+GYCPQFDALFETLTGREHL LYAA+KGIP A+   A    I ++GL QY+D+ AGSYSG
Sbjct: 1623 TAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKGIPAAEVEEAASTMITDLGLGQYADKLAGSYSG 1704          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A6H5JVX0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX0_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.820e-24
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T+G+A L G DVGK PEAIH+L+GYCPQFDALFETLTGREHL LYAA+K   T          I ++GL  Y+D+ AGSYSG
Sbjct:  204 TAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKAASTM---------ITDLGLGHYADKLAGSYSG 276          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A835YSC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.320e-24
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T G A L+G DV K+ EA+H+L+GYCPQFDALFE++T REHL +YA +KG+  +  +AA E K+ EM L QY+D+ AG YSG
Sbjct: 1978 TQGRATLAGVDVAKDAEAVHRLIGYCPQFDALFESMTAREHLEMYARIKGLRESDVKAAAEAKMTEMDLLQYADKLAGGYSG 2059          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A6H5K0F9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F9_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.390e-23
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    7 LSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            L G DVGK PEAIH+L+GYCPQFDALFETLTGREHL LYAA+K   T          I ++GL   +D+ AGSYSG
Sbjct:   10 LGGPDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKAASTM---------ITDLGLGHNADKLAGSYSG 76          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A0V0QAC1_PSEPJ (p-loop containing nucleoside triphosphate hydrolase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QAC1_PSEPJ)

HSP 1 Score: 100 bits (249), Expect = 7.090e-23
Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            TSG AH++G+DV    +     +GYCPQFDAL E LT REHL LYAA+KGIP   R+  ++ KIEEM L+++ + PAG+YSG
Sbjct: 1373 TSGQAHINGYDVSTEMDIARYAIGYCPQFDALLENLTTREHLELYAAIKGIPKNIRKELIDNKIEEMNLKKFENIPAGTYSG 1454          
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Match: A0A0G4FPQ1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FPQ1_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 8.550e-22
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKGIPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG 82
            T G+A L   D+ K    + +LVGYCPQFDAL + LTGREHL L+A +KGIP  +    V++ IE++G+R+Y+DRPAG+YSG
Sbjct: 1580 TDGTAKLGKKDILKEQVTVRRLVGYCPQFDALIDNLTGREHLCLFARIKGIPKTQLYEYVQKIIEKLGIREYADRPAGTYSG 1661          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig961.17374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNW1_9PHAE1.010e-4081.71ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE8_ECTSI6.070e-3981.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE2.200e-3679.27ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE9_ECTSI2.220e-3679.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZA6_ECTSI9.150e-3068.29ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A6H5JVX0_9PHAE2.820e-2462.20ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YSC0_9STRA4.320e-2457.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K0F9_9PHAE4.390e-2361.84ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A0V0QAC1_PSEPJ7.090e-2354.88p-loop containing nucleoside triphosphate hydrolas... [more]
A0A0G4FPQ1_VITBC8.550e-2253.66Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..82
e-value: 5.9E-14
score: 54.2
IPR026082ABC transporter APANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAcoord: 1..82
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig961contigS-latissima_F_contig961:12466..13567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig961.17374.1mRNA_S-latissima_F_contig961.17374.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig961 12465..13567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig961.17374.1 ID=prot_S-latissima_F_contig961.17374.1|Name=mRNA_S-latissima_F_contig961.17374.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=82bp
TSGSAHLSGFDVGKNPEAIHKLVGYCPQFDALFETLTGREHLMLYAAVKG
IPTAKRRAAVEEKIEEMGLRQYSDRPAGSYSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026082ABCA
IPR027417P-loop_NTPase