prot_S-latissima_F_contig96.17353.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17353.1
Unique Nameprot_S-latissima_F_contig96.17353.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length273
Homology
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: A0A6H5JB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB41_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.690e-55
Identity = 125/275 (45.45%), Postives = 159/275 (57.82%), Query Frame = 0
Query:   19 ALIVPPTLRWASVPPTSYVHCVAEAPSP-------PRRWRPTMEAE-LPSGGDSGRVDDPSAVPRIPDAVGTAALQGRLDFIKRRKSYRPANSGARKAA-APTARWTGRQPSTVGPGP-LCP--VWVLMFDSGP-----RSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEFDP----KAPHPGRRGRGGNRLSPAVSEEASVFTPEDVRKFRAKFERLYSQE 272
            AL+V  T   A V P+++    A APS          R   TM AE LP G  +  +D   A   IPD+VG+AA++ ++D IKR +      +G R      + RW     S     P L P  VWVL+F  G       S  QRGLYCLWS G NS +AFE R+GALRYA +LK +GLG+P PTR ++ DLQ+FC DHSFG+ ++PADVVP AP K K+DL FDP     +PH GRR  G         +   V TP+D+RK+RAKFERLY+QE
Sbjct:    8 ALLVMITRAEAFVTPSAFRLSAAVAPSTRLLYSGQQGRRVVTMAAEGLPPGDHN--IDPLDAQSSIPDSVGSAAIRRQIDSIKRSRG-----AGKRTPRQGESIRWVASTESEHRARPTLLPRAVWVLLFSQGSGSFGSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPTPTRVSMTDLQRFCLDHSFGIRMIPADVVPEAPRKTKKDLGFDPLNLTSSPH-GRRDAG--------EDAGPVLTPDDIRKWRAKFERLYAQE 266          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: D8LLX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX3_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.460e-21
Identity = 65/153 (42.48%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   54 MEAELPSGGDSGRVDDPSAVPRIPDAVGTAALQGRLDFIKRRKSYRPANSGARKAAAPTA-RWTG------RQPSTVGPGPLCPVWVLMFDSGPRSGA-----QRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQ 194
            M AE    GD    D   A   IPD VG+AA++ R+D IKR +      +G R      + RW        R  ST+ P     VWVL+F+ G  S +     QRGLYCLWS G NS +AFE R+GALRYA +LK +GLG+P PTR ++   +
Sbjct:    1 MAAEGLPPGDHSNNDPLDAQSSIPDRVGSAAIRRRIDSIKRSRG-----AGKRTPRQDESIRWVASTESGHRARSTLLPRA---VWVLIFNQGSGSFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTSFE 145          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: UPI001680033A (DUF3110 domain-containing protein n=1 Tax=Pseudanabaena sp. FACHB-1277 TaxID=1540896 RepID=UPI001680033A)

HSP 1 Score: 74.3 bits (181), Expect = 4.480e-13
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEFDPKAPHPGRRGRGGNRLSPAVSEEASVFTPEDVRKFRAKFERL 268
            VWVL+F++   +    G+Y L   G N ++AFE  D A+RYA  L+AQ    P        DL++FC+D  + L +VP D + V P+KN +  +++        R R G++L   +  E+ V  P  +   R +FE L
Sbjct:    3 VWVLLFNANTDN---EGIYTLEIEGNNIIIAFEQEDDAIRYAGLLEAQDFLSPTVESIDRQDLEEFCQDAHYDLNIVPTDALLVPPEKNVDRTDWE--------RERDGDKLP--LDYESEVEDPV-IAMMRRRFENL 126          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: Q7NK16_GLOVI (Glr1664 protein n=2 Tax=Gloeobacter TaxID=33071 RepID=Q7NK16_GLOVI)

HSP 1 Score: 71.2 bits (173), Expect = 5.510e-12
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 0
Query:  133 VLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEFDPKAPHPGRRGRGGNRLSPAVSEEASVFTPEDVRKFRAKFERLY 269
            VL+F+SG  +    G+Y L  +  N+VVAFE R+ A RYA  L+AQ   +P        +++QFC D S GL VV A  + + P+K+KE L++ P                    E+A++    ++ + R+  E++Y
Sbjct:    5 VLIFNSGSEN---EGIYTLNVDSENTVVAFESREDAERYANLLEAQDFIVPEVELIEAEEIKQFCEDSSLGLIVVEAGQLVMPPEKSKETLDWSP--------------------EQAALEPNSELERMRSMLEQMY 118          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: A0A2W4Y0T0_9CYAN (DUF3110 domain-containing protein n=8 Tax=Pseudanabaena TaxID=1152 RepID=A0A2W4Y0T0_9CYAN)

HSP 1 Score: 71.2 bits (173), Expect = 6.230e-12
Identity = 45/138 (32.61%), Postives = 69/138 (50.00%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEFDPKAPHPGRRGRGGNRLSPAVSEEASVFTPEDVRKFRAKFERL 268
            VWVL+F++   +    G+Y L   G N +VAFE  D A+RYA  L+AQ    P        DL++FC++ ++ L +VP D + V P+KN +  ++           RG + L P   +E  V  P  +   R + E L
Sbjct:    3 VWVLLFNANTDN---EGIYTLEIEGNNIIVAFEQEDDAIRYAGLLEAQDFLSPTVESIDSQDLEEFCQEANYDLNIVPTDALLVPPEKNVDKTDWS--------SDRGKDALEP--EDEVEVEDPV-IAMMRRRLENL 126          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: UPI001680A049 (DUF3110 domain-containing protein n=1 Tax=Pseudanabaena sp. FACHB-1998 TaxID=2692858 RepID=UPI001680A049)

HSP 1 Score: 70.5 bits (171), Expect = 1.170e-11
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEF 225
            VWVL+F++   +    G+Y L   G N VVAFE  D A+RYA  L+AQ    P        DL++FC++ ++ L +VP D + V P+KN +  ++
Sbjct:    3 VWVLLFNANTDN---EGIYTLEIEGNNIVVAFEQEDDAIRYAGLLEAQDFLSPTVESINSEDLEEFCQESNYDLNIVPTDALLVPPEKNVDKTDW 94          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: A0A2Z5WZP7_9CYAN (Uncharacterized protein n=3 Tax=Pseudanabaena TaxID=1152 RepID=A0A2Z5WZP7_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 3.200e-11
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKN------KEDLEFDPKAP 230
            VWVL+F++   +    G+Y L   G N V+AFE  D A+RYA  L+AQ    P        DL+ FCRD  + L +VP + + V P+KN       +DLE D   P
Sbjct:    3 VWVLLFNANTDN---EGIYTLEIEGNNIVIAFEQEDDAIRYAGLLEAQDFLSPTVESIDSEDLEAFCRDADYELNIVPTEGLLVPPEKNVDKTDWSKDLEKDQSEP 105          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: A0A7Y5I7T1_9CYAN (DUF3110 domain-containing protein n=1 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5I7T1_9CYAN)

HSP 1 Score: 63.9 bits (154), Expect = 2.910e-9
Identity = 32/95 (33.68%), Postives = 53/95 (55.79%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEF 225
            VWVL+F++   +    G+Y L   G N ++AFE  D A+RYA  L+AQ    P        DL++FC + S+ L +V  D + + P++N +  ++
Sbjct:    3 VWVLLFNANTDN---EGIYTLEIEGKNIIIAFEQEDDAIRYAGLLEAQDFLSPTVESIESKDLEEFCEEASYELNIVSTDALLMPPERNVDKTDW 94          
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Match: UPI00037C82E0 (DUF3110 domain-containing protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00037C82E0)

HSP 1 Score: 55.1 bits (131), Expect = 5.060e-6
Identity = 33/138 (23.91%), Postives = 69/138 (50.00%), Query Frame = 0
Query:  131 VWVLMFDSGPRSGAQRGLYCLWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDHSFGLEVVPADVVPVAPDKNKEDLEFDPKAPHPGRRGRGGNRLSPAVSEEASVFTPEDVRKFRAKFERL 268
            V +L+F++G  +    G++ +     N+++ F+ +D ALRYA  L+AQ             +++QFCR   +  ++V +  + + P+KN E+L+++ ++            +S +   EA     E++ + R + E L
Sbjct:    3 VHILLFNAGTDN---EGIHTVQIGERNTILMFQAKDDALRYAGLLEAQDFPEATVEAIDSEEVEQFCRQADYEWKIVESGQLEIPPEKNVEELDWEQESE---------KSVSESEDVEAESMPNEELDRIRRQLEGL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JB41_9PHAE5.690e-5545.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX3_ECTSI1.460e-2142.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001680033A4.480e-1333.33DUF3110 domain-containing protein n=1 Tax=Pseudana... [more]
Q7NK16_GLOVI5.510e-1232.12Glr1664 protein n=2 Tax=Gloeobacter TaxID=33071 Re... [more]
A0A2W4Y0T0_9CYAN6.230e-1232.61DUF3110 domain-containing protein n=8 Tax=Pseudana... [more]
UPI001680A0491.170e-1137.89DUF3110 domain-containing protein n=1 Tax=Pseudana... [more]
A0A2Z5WZP7_9CYAN3.200e-1138.68Uncharacterized protein n=3 Tax=Pseudanabaena TaxI... [more]
A0A7Y5I7T1_9CYAN2.910e-933.68DUF3110 domain-containing protein n=1 Tax=Pseudana... [more]
UPI00037C82E05.060e-623.91DUF3110 domain-containing protein n=1 Tax=Pleuroca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 131..214
e-value: 5.7E-14
score: 52.1
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.582

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:426222..437151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17353.1mRNA_S-latissima_F_contig96.17353.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 426086..438542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17353.1 ID=prot_S-latissima_F_contig96.17353.1|Name=mRNA_S-latissima_F_contig96.17353.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=273bp
MGWAHRILVISQLALTPEALIVPPTLRWASVPPTSYVHCVAEAPSPPRRW
RPTMEAELPSGGDSGRVDDPSAVPRIPDAVGTAALQGRLDFIKRRKSYRP
ANSGARKAAAPTARWTGRQPSTVGPGPLCPVWVLMFDSGPRSGAQRGLYC
LWSNGINSVVAFEGRDGALRYALELKAQGLGLPGPTRFTVNDLQQFCRDH
SFGLEVVPADVVPVAPDKNKEDLEFDPKAPHPGRRGRGGNRLSPAVSEEA
SVFTPEDVRKFRAKFERLYSQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110