prot_S-latissima_F_contig96.17349.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17349.1
Unique Nameprot_S-latissima_F_contig96.17349.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length209
Homology
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BLAST of mRNA_S-latissima_F_contig96.17349.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.450e-31
Identity = 96/211 (45.50%), Postives = 113/211 (53.55%), Query Frame = 0 
Query:    4 VLSEAQRGARAAKASAEAVAMHELSSKLFPLLVERLPEVLGRDTT-EDPSGSAGRAGVTTAA------AVRVSAAVSYLRLLAALVARAPNPEEAFVRARLLLVALVKIVAAEACVITGRGGSPTVXXXXXXXXXXXXXXXXXXXXXXXXSAAGEARAVGVGAGVEARSAASDTAVLCMQTLKFMLDWAEQPVGGVSGGGGGASGGRSVHR 207
            VL+EA+R  R A+A A+A AMHELSS LFPLLVERLPEVLG++   EDPS                  AVRV+A VSYLRLL ALV  APNP +A VRARLLL ALVK +   A V+ G                                        G G GV ARSAASD+ +LCMQTL+F++ W E   G         +GG+SVHR
Sbjct: 4391 VLTEAERNVRTAQALAKAAAMHELSSALFPLLVERLPEVLGQEAAAEDPSXXXXXXXXXXXXXXXXXXAVRVTAKVSYLRLLTALVTGAPNPSDATVRARLLLAALVKAITKGAAVVVG----------------------------------------GDGVGVRARSAASDSTILCMQTLRFLVGWGEPSDG---------TGGKSVHR 4552
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE1.450e-3145.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:375664..378008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17349.1mRNA_S-latissima_F_contig96.17349.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 375664..378009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17349.1 ID=prot_S-latissima_F_contig96.17349.1|Name=mRNA_S-latissima_F_contig96.17349.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=209bp
AALVLSEAQRGARAAKASAEAVAMHELSSKLFPLLVERLPEVLGRDTTED
PSGSAGRAGVTTAAAVRVSAAVSYLRLLAALVARAPNPEEAFVRARLLLV
ALVKIVAAEACVITGRGGSPTVAAASSSELTSSSDGGSVDAAAAATSAAG
EARAVGVGAGVEARSAASDTAVLCMQTLKFMLDWAEQPVGGVSGGGGGAS
GGRSVHRPV
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