prot_S-latissima_F_contig96.17347.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17347.1
Unique Nameprot_S-latissima_F_contig96.17347.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length178
Homology
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BLAST of mRNA_S-latissima_F_contig96.17347.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.480e-7
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   21 TETDILRAGLGELMPLLRSNVARVSQASSTYLATLLLGSGPATT 64
            +E  +LRAGLG+L+PLL+SNVARVS+ASS YLATLLLG+ PA T
Sbjct: 3665 SEQAVLRAGLGQLIPLLQSNVARVSEASSAYLATLLLGTLPAAT 3708
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BLAST of mRNA_S-latissima_F_contig96.17347.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.490e-7
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   21 TETDILRAGLGELMPLLRSNVARVSQASSTYLATLLLGSGPATT 64
            +E  +LRAGLG+L+PLL+SNVARVS+ASS YLATLLLG+ PA T
Sbjct: 3850 SEQAVLRAGLGQLIPLLQSNVARVSEASSAYLATLLLGTLPAAT 3893
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLX0_ECTSI1.480e-772.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J981_9PHAE1.490e-772.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:372706..373239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17347.1mRNA_S-latissima_F_contig96.17347.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 372706..373241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17347.1 ID=prot_S-latissima_F_contig96.17347.1|Name=mRNA_S-latissima_F_contig96.17347.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=178bp
AVAEEPVETQATSVSGGLHSTETDILRAGLGELMPLLRSNVARVSQASST
YLATLLLGSGPATTGLSASPPASQSVGGHGAGGGGGASFTEGGASGEHEP
DDGSPGTGANAGSARASQGMASGSYAASAESMSEAEGRIETEATSDPGSD
SDGDAEGETNSCKDGDSVGGGGRGAESS
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