prot_S-latissima_F_contig96.17343.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17343.1
Unique Nameprot_S-latissima_F_contig96.17343.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length542
Homology
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A6H5JCQ4_9PHAE (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCQ4_9PHAE)

HSP 1 Score: 731 bits (1886), Expect = 7.840e-261
Identity = 377/519 (72.64%), Postives = 433/519 (83.43%), Query Frame = 0
Query:    7 LVTAVLTADVFLSLCSRAQAFYVPSSIPSQRRPQCSSSRSSHAKDAVSHRKHCISGLALVAHPASRRPRAAATP-RMAFDPDVTPGVLDAFHAWLTKSGVKLGDNVVLAGRSPLSGGRGLTTTKAVENGQQVLAMPQSLGVTAAGVKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMPAKGELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGTSSTFDLTAVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEV 524
            LVTAVL A V +S CSR +AF V SS  + R  +    RSS  +  +SHR+             ++  R    P  MAFDPDVTPG LDAFHAWLTKSGV+L DN VLAGRSPL+GGRGL  TKA+E GQ VLA+PQSLG+TAAG+K+SGIA+Y+ G+EGWTG+TG+IALQ+LWERA  E S MAPWIA +P +GELEMPLFW E DL LADASSTRGISGF ADVDED+AWL++NAF+K+P+VFPAD FGP DFRWAVG+ALSRSFFV+GELRLTPLVDFANHSS R V EP GG+TG+FGS AVVLRA + YE GEEF VSYGPKGAAGYLEENGFVPPVSGSEVTCELEF++P D++FFDDKEDIL+  GL TSSTFDLTAVGLPDAELV+FLRLLC+SGED+FLLE IFRNEVW+FM EPVSR NEEAVNE L+TRC  ELK  FG+A+E+ D++SGKVEA+ERQRLCA VR+GER+ALQMT+ WCE+DSKALDRKEYYQERRLK+LQLDLPWE 
Sbjct:   16 LVTAVLAASVAMSSCSRVRAFCVRSSSRAHRPTR----RSSLTRTIMSHRRR------------TQHARTTTPPLHMAFDPDVTPGALDAFHAWLTKSGVRLTDNAVLAGRSPLAGGRGLVATKAIETGQSVLAIPQSLGLTAAGLKSSGIAQYVKGFEGWTGETGLIALQVLWERALREGSKMAPWIAVLPTEGELEMPLFWGEADLTLADASSTRGISGFVADVDEDFAWLSENAFSKHPKVFPADKFGPGDFRWAVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSKAVVLRAGKKYEEGEEFFVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFSIPEDDKFFDDKEDILERAGLRTSSTFDLTAVGLPDAELVRFLRLLCVSGEDAFLLEGIFRNEVWDFMNEPVSRPNEEAVNELLATRCEEELKALFGTAREEADIVSGKVEASERQRLCARVRQGERMALQMTRSWCESDSKALDRKEYYQERRLKELQLDLPWEA 518          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A835ZE37_9STRA (Putative ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE37_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 1.860e-130
Identity = 230/480 (47.92%), Postives = 297/480 (61.88%), Query Frame = 0
Query:   94 DAFHAWLTKSGVKLGDNVVLAGRSPLSGGRGLTTTKAVENGQQVLAMPQSLGVTAAGVKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMPAKGELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSS-----------------SRVVKEPAGGSTGMFGSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPP------VSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGTSSTFDLTAVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLM-SGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPTERRPGG--------GELDW 541
            +AF AWL K+GVK G+ ++  G+S L GGRGL TT  ++ GQ  + +P +L +TA  V    ++ +L GY+G  GDTG+IALQLL+E+ QG KS +A W++ +PA+G L+MPLFW E+DLA+AD SSTRG SG  ADV ED+AWL QN F       P D F  + F WAVG  +SR+FFV+G L L PL+DFANH                       +E  G   G+FG   V L A R Y  GEEFL+SYGPKGAA YLEE+GF+P       V GSE+  EL     A++RF DDKEDIL+   L  + +FDL   GLPD  +VQ+ RL+ L G D+FLLE++FR ++W FMEEPVS +NE A N  +   C  +L  F  SA+EDE L+ SG    ++R +LCA +R  ER ALQ T  +  TD+ ALDRKEYYQ RRL+DL LD P +  E++       G         ELDW
Sbjct:   53 EAFKAWLAKAGVKGGECLLEIGQSSLDGGRGLMTTAPLKAGQAAVTVPATLCITADKVVKGALSSHLKGYDGCLGDTGLIALQLLYEQQQGSKSAIAAWLSLLPAQGTLDMPLFWPEKDLAVADGSSTRGFSGLRADVIEDHAWLAQNMFTTATSPIPKDAFTEDAFVWAVGCVISRAFFVDGALHLVPLIDFANHGDVDDDSXXXXXXXAAPLPETAAQESCG--LGVFGGKGVRLVAGREYRPGEEFLISYGPKGAATYLEEHGFLPKGDGGGGVVGSEI--ELGLKAEAEDRFRDDKEDILETQDLPFNLSFDLYPSGLPDQAMVQYARLVMLGGMDAFLLEAVFRTDIWGFMEEPVSAANELAANNYIIGICQAQLDSFTSSAEEDEKLLASGGEGLSKRHQLCAQLRSAERAALQHTVNFFLTDNTALDRKEYYQARRLRDLNLDRPLDESEIFEPGSASNGMPRGRDAQRELDW 528          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A6S9FGC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FGC7_HETAK)

HSP 1 Score: 345 bits (884), Expect = 1.620e-109
Identity = 201/450 (44.67%), Postives = 271/450 (60.22%), Query Frame = 0
Query:   97 HAWLTKSGVKLGDNVVLAGRSPLSGGRGLTTTKAVENGQQVLAMPQSLGVTAAGVKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMPAKGELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPE-VFPADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGTSSTFDLTAV--GLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMS--GKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPTERRPGGGELDW 541
             AWL  +GVK     V   +  L  G+GL  TKA++ G   L +PQSL ++ +    S I KYL  +EGWTG+ G+IAL LL+E++ G  S   P+IAA+P   ++E PLFW+EE L LA  SST+GI GF  DV ED+         ++P   FPA+ F  E F+WAV  A SRSFFV+GELRL PL+DFANH       EP GG  G+FG  AV   A + Y+ G EFLVSYGPK  A YLEE+GF+P +   + +C L F V   + + DDK DIL+L G      FD+ +V  G PD  +++FLRL+ L+  D+FLLE++FR+E W+FM  P+S  NE  V + +  + +  L  F G  + D+ L+   G+    ER R  A +R  ER AL+ T+ W E D++ALD KEYYQERRLK L LD P +  E+  +       ++DW
Sbjct:   57 EAWLADNGVKDLSVTVGDSKGKLGMGKGLIVTKAMKRGTAALNIPQSLCLSVSSALESQIGKYLKNFEGWTGEVGIIALHLLYEKSIGNDSKFGPFIAALPE--QIEHPLFWNEETLELAQKSSTKGIKGFVEDVAEDFEDFKSQVIGRSPPGTFPAEFFNLESFKWAVACAASRSFFVDGELRLVPLLDFANHGDGVAFVEPEGGGMGIFGGKAVKALANQAYQPGSEFLVSYGPKSPAEYLEEHGFLPRLDTKKTSCMLAFGVRDADPYRDDKLDILELAGEEPEQCFDVFSVDNGEPDPAMMRFLRLVTLTSSDAFLLEAVFRDECWDFMALPISEVNEANVGKLVMDKIDEALGNFHGDREGDQALVKTDGQEWVAERVRGLARLRLAERAALEATRGWFERDAQALDLKEYYQERRLKSLGLDRPLDDAELMSSG---AARDMDW 501          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A7S2NWX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWX9_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.610e-87
Identity = 188/457 (41.14%), Postives = 257/457 (56.24%), Query Frame = 0
Query:  124 GLTTTKAVENGQQVLAMPQSLGVTAAGVKN--SGIAKYLTGYEGWTGDTGVIALQLLWERAQ---------------GEKSIMAPWIAAMPAKGEL--EMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFP---ADM---FGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSAA-VVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGTS----STFDLTAV----GLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEA-TERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPT----ERRPGGGELDW 541
            GL  T+ V  G  V+++P    +TA   +   + +      Y+GWTGD G+IAL +L ERA+                ++ + A W A +P+  E+  E PL W E+D     +SST+ I     D +ED +WL    ++K+  +FP   AD    F  E F+WA+ +A SR  FV+G L+L P++DF+NH+    V E  GG  G FG+ A V ++A + Y+ G+E  VSYGPK AA YL E+GF+P  + +    EL F V  ++RFFDDK D+L+    G        FD+ A     G PD  L+QFLRL  L   D+FLLESIFR EVW FM  PVS  NE  V EA+ + C + LK          D ++ K EA ++ +R CA++R  ER ALQ T ++ + + +ALD KEYYQERRLKDL LD PWE DE  P      R+PG G LDW
Sbjct:   84 GLIATENVRKGDAVISIPNDFCLTADKARQVYTDMGFMSDKYDGWTGDLGLIALLILRERAKLAEDYSDSYMSKEDSSKRELFAEWAATLPSMEEMMGEHPLLWVEDDQEELQSSSTKKIYRLLDDAEEDASWLEDKMWSKDRSLFPEKDADKQPCFTLEGFKWALSIANSRCVFVDGSLKLAPIIDFSNHNDFETV-EVTGGFFGTFGTTAGVQVKADKKYKKGDEIFVSYGPKSAAEYLLEHGFMPDSTKTTAVAELTFEVDENDRFFDDKADVLEFETGGAPIEPVQAFDVVAAPGKDGQPDPALMQFLRLAKLGNTDAFLLESIFRKEVWGFMAYPVSEKNEREVIEAIISSCTDALKEMNEINDAATDEVNSKDEAISKNKRACATLRCIERRALQRTLEYVQREEEALDLKEYYQERRLKDLGLDSPWEGDENNPDVGWGARKPGDGGLDW 539          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A7S2FAY5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAY5_9STRA)

HSP 1 Score: 287 bits (734), Expect = 5.200e-87
Identity = 189/458 (41.27%), Postives = 256/458 (55.90%), Query Frame = 0
Query:   95 AFHAWLTKSGVKLGDNVVLAGRSPLS--GGRGLTTTKAVENGQQVLAMPQSLGVTAAGVKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMP---AKGELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGM--FGSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSE-VTCELEFTVPADNRFFDDKEDILQLNGLGTSSTFDLTAVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPTERRPGG---GELDW 541
            AF  WL ++GV+   +    GR+  S   G G+   K V  G +V+A+P  L +T    ++S +   L  ++GWTG TG+IA QLL+E++QG +S   PWI  +P     G LE+PLF     +A  D  STR I     +V ED+ WL++    +   +  AD+   E +RWAVG+ LSRSFFV+G   L PLVDFANH  + + +E +GG  G+  F   AV + + R + AGEE  V+YG +  A YLEE GFVPP    E    EL F +   +RFFDDK D+L+   L  S++FDL      D ++VQFLRL CL G D+FLLE +F NE+W FM  PVS  NE AV   + +RC   L      A+E ++   G   A        SVR+GE  ALQ T  W   D + L+ K+YYQERRLK+L LD  W  ++        GG   G +DW
Sbjct:   76 AFMDWLEQNGVQ--SDTAEVGRADASRGSGMGIRLKKKVGKGDKVVAVPLQLCMTVETARSSAVGPLLENFDGWTGATGIIAAQLLFEKSQGARSKFFPWIELLPPARTPGALELPLFGG---MAGVDKCSTRPIKDLEDEVTEDFEWLSEQ---EEVSLLSADL---EAWRWAVGIVLSRSFFVHGGTCLAPLVDFANHDPANL-REISGGFVGIPPFAKKAVCIFSDRPFAAGEELTVNYGRRSGACYLEEYGFVPPNDLDENCLVELVFGLDEKDRFFDDKADVLEQQELDMSASFDLGFGSEADPDMVQFLRLSCLKGADAFLLEPVFSNELWGFMSYPVSEENERAVGNLVLSRCRTALATL--RAEEADEPSQGLGPAV------ISVRQGEIRALQATVSWWTRDLELLNLKQYYQERRLKELNLDKEWSPEDGQTESSFSGGRAPGNVDW 513          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A0G4GD31_VITBC (SET domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD31_VITBC)

HSP 1 Score: 286 bits (733), Expect = 1.160e-86
Identity = 178/443 (40.18%), Postives = 256/443 (57.79%), Query Frame = 0
Query:   93 LDAFHAWLTKSGVKLGDNVVLAGRSPLSGGRGLTTTKAVENGQQVLAMPQSLGVTAAGVKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMPAKGELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSA-AVVLRAARNYEAGEEFLVSYGP-KGAAGYLEENGFVPPVSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGT-SSTFDLTAVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKV-EATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPTE 531
            LD+F  WL   GVK  D+V +  +     G GL  TK ++ G+   ++P SL +T      + + ++L G      +  ++AL LL+E+++G+ S +APW+A +P K EL  P+ W + + A    S+T+ IS +  +   ++  L +    K+P VF    F  E+++WA+ +  SRSFFV+  LR+TPLVDF NH  +  V EP G   G  GS+  V LRA R+Y  G+EF VSYGP + A  +L+  GF+P  + S  +CE+E ++   + FFDDKEDIL  N   T S  +DL A   PD  L+QFLRL  +  +D+F+LE +FR EVW  M  P S +NE    + L   C   L  F    + D  +++G   EA+ERQ+L A VR  E+ ALQ T +WCE+++  L  KEYYQERRLK L LD P   DEVY  +
Sbjct:   79 LDSFKQWLANKGVK-SDSVSVDVKPSDVAGLGLICTKPIKRGEAAASVPMSLSITKESATQTPMREHLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLPTKDELNNPILWSDGERAELARSTTKAISTWLEERSLEFMRLQRRVMEKHPNVFDPATFTLENYQWAMAVVTSRSFFVDSRLRMTPLVDFVNHDPAANV-EPDGAPMGFLGSSRGVRLRADRDYAVGDEFRVSYGPERSAVEFLQMFGFIPEYAPS--SCEIEMSIREADSFFDDKEDILVNNEFRTLSQVWDLQADKDPDPTLLQFLRLREIGQKDAFILEPLFRGEVWYHMSLPFSPANEGDALKVLEDECVRLLTSFTSDDETDRRILAGSSPEASERQKLMARVRVSEKAALQSTIEWCESEALGLRLKEYYQERRLKLLNLDGPLTDDEVYADD 517          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A7S2A866_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A866_TRICV)

HSP 1 Score: 282 bits (721), Expect = 4.120e-84
Identity = 189/477 (39.62%), Postives = 250/477 (52.41%), Query Frame = 0
Query:  124 GLTTTKAVENGQQVLAMP--QSLGVTAAG--VKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQ--------GE--------------KSIMAPWIAAMPAKGELEM--PLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFP----------ADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSA-AVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFTVPADNRFFDDKEDILQLNGLGTS-----STFDLTAV-----GLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATER-----QRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPT-----ERRPGGGELDW 541
            GL  T  V +G   L++P   +L  TA G  V   GI     GY+GWTGD G+IA+ +L E A+        G+              ++++  WI ++P   E+    PL W E+D  +  +SSTR +     DV+ED AWL +  +  +   FP           D F  + + WAV +  SR+ FV+G LRL P++D ANH     V E  GG+ G FG+     +R  R Y  G+E  VSYGPK AA YL E+GFVPP + S    EL F +   +RF DDK D+L+     ++      +FDL A+     G PD  + QFLRL  L G+D+FLLESIFR E+WEFM  PVS +NE  V +A+   C   LKG      + ED   G     +      +RLCA+VR  ER AL  T ++ E D  ALD KEYYQERRLKDL LD  W  D+  P       R PG G+LDW
Sbjct:  128 GLIATDDVRSGDVALSVPYDDALQFTAKGSSVTFGGILP--EGYDGWTGDAGLIAMSVLNELARTAAADDGGGDGGAGVPLPKRKPPVQNLIEAWIKSLPTPSEMSSSHPLLWSEDDQEILQSSSTRKVYRTLDDVEEDAAWLTERVWDLDRTKFPDTVTLENGDERDCFNADGYLWAVAIVTSRAVFVDGALRLIPVLDMANHDDIGTV-EVGGGTMGAFGTTKGAEIRTGRKYSKGQEVTVSYGPKSAAEYLLEHGFVPPRAKSTAVSELTFEIDEGDRFRDDKLDVLEFETYDSAPMEPVQSFDLVAMPGGGDGQPDPAMAQFLRLAKLGGKDAFLLESIFRKEIWEFMAYPVSETNEGDVCDAIREACEGALKGMEELESKSEDAAEGAAAGEDEDENSPRRLCAAVRTAERAALSRTLEYVERDRMALDLKEYYQERRLKDLGLDSEWSEDDDNPDVGWGQTRAPGSGDLDW 601          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: K0QYB9_THAOC (Rubis-subs-bind domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYB9_THAOC)

HSP 1 Score: 263 bits (671), Expect = 7.720e-77
Identity = 169/428 (39.49%), Postives = 237/428 (55.37%), Query Frame = 0
Query:  162 GYEGWTGDTGVIALQLLWE----------------RAQGEKSIMAPWIAAMPAKGEL-EM-PLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADM-------------FGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMF--GSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPV-----SGSEVTCELEFTVPADNRFFDDKEDILQ-----LNGLGTSSTFDLT----AVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEV-DEVYPTERRPGGGELDW 541
            GY+GWTGD G++A+ LL E                R +G +++M+ WIA++P+  E+ EM PL W+E++  +   SST+ I     D+++D +WL++N ++ + E FP  +             F  + FR+AV +  SRSFFV+G LRL P VD+ANH       E  GG  GM    S  V+L++ +    G+E  +SYGPKG A Y+ ++GFVPP+      G  +T EL F V   +RF DDK DIL+     L  +  +  FD+     + G PD  ++QFLRL+ L+G+D+FLLESIFR E+W FM EPVS  NE+A   A+   C   L        ED        E     +LC+ VR  ER AL+ T  + + +++ALD KEYYQERRLK L LD  W   DE   T R PG  + DW
Sbjct:  174 GYDGWTGDVGLLAMLLLNEMARQDADSPKGVDLPRRKEGVQALMSAWIASLPSFEEMTEMHPLLWNEDEQEIMQLSSTKKIYRLLDDIEDDSSWLDENVWSADREKFPETVKIRVGDADEERQCFTVDGFRYAVAVVRSRSFFVDGALRLLPYVDYANHDDYDS-NELVGGGIGMLWGSSKGVLLKSGKALRVGDEVRISYGPKGPADYILDHGFVPPMCQLSTQGGAITAELSFEVDESDRFRDDKLDILEFETYDLAPMEPAQVFDVVGGPGSTGEPDPAMIQFLRLVKLAGKDAFLLESIFRKEIWGFMSEPVSEDNEKASVTAVQEACEAALSDMNELESEDSSASPSLNE-----QLCSMVRGSEREALERTLAYIKQEAEALDLKEYYQERRLKTLGLDSEWTPEDEFGSTTRVPGAADYDW 595          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: A0A7S4T3Q7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T3Q7_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.800e-76
Identity = 177/479 (36.95%), Postives = 252/479 (52.61%), Query Frame = 0
Query:  124 GLTTTKAVENGQQVLAMPQSLG----VTAAGVKNSGIAKYLT--GYEGWTGDTGVIALQLLWERAQGE------------------KSIMAPWIAAMPAKGELEM--PLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPA--------------DMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSA-AVVLRAA--RNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGSEVTCELEF---TVPADNRFFDDKEDILQLNG-----LGTSSTFDLTAV-----GLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPWEVDEVYPT-----ERRPGGGELDW 541
            GL TT+ V   Q VLA+P S G    +    +    + K L   GY+GWTGD G++++ LL E A+                    + ++  W+ ++P   E++   PL W+EED  +A +SST+ I     DV++D +WL +  ++ +   FP               ++F  + F++A+ L  SRS++V+G LRL P++DFANH       E  GG+ G FG+   VV+R++  ++Y   EEF +SYGPK AA YL E+GFVPP   +    EL F   T    +RF DDK DIL+        +  + TFD+ +      G PD  ++QFLRL+ L G+D+FLLESIFR EVWEFM EPVS  NE +V + +   C   LK                      + LCA VR  ER AL  T ++ + + +ALD KEYYQERRLK+L LD  W  D+ +        R PGG + DW
Sbjct:  111 GLFTTENVNKNQVVLAIPYSDGPDQLILTPDLATKVVYKDLLPDGYDGWTGDAGLLSMLLLNEFARAASDDDNELGISLPKRNLDAQELITKWVQSLPTPNEMKKHHPLLWEEEDQEVAQSSSTKKIYRTLDDVEDDVSWLEERVWSADRSKFPEQITLNDGVGGETTMELFTTKGFKYALALVNSRSYYVDGALRLIPILDFANHQDLST-DEVCGGTMGTFGTTKGVVIRSSSVKSYNPKEEFFISYGPKSAADYLLEHGFVPPKCVNTCVSELTFDVDTASGKDRFADDKLDILEFETYDSAPMDPTQTFDVVSEVGVQDGEPDLAMMQFLRLVKLGGKDAFLLESIFRKEVWEFMSEPVSERNEGSVVDTVVDACTKALKEMDELEXXXXXXXXXXXXEDTPKSLCAKVRNAERKALTRTLEYMQREKEALDLKEYYQERRLKNLGLDSDWNEDDEHSDVGWGQTRAPGGADYDW 588          
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Match: B8C224_THAPS (Rubis-subs-bind domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C224_THAPS)

HSP 1 Score: 260 bits (665), Expect = 5.820e-76
Identity = 166/433 (38.34%), Postives = 235/433 (54.27%), Query Frame = 0
Query:  162 GYEGWTGDTGVIALQLLWE-------------------RAQGEKSIMAPWIAAMPAKGELE--MPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVFPADM-------------FGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAGGSTGMFGSA-AVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPV------SGSEVTCELEFTVPADNRFFDDKEDILQ-----LNGLGTSSTFDLT----AVGLPDAELVQFLRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNELKGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSKALDRKEYYQERRLKDLQLDLPW--EVDEV-YPTERRPGGGELDW 541
            GY+GWTGD G++A+ +L E                   R +G +S+M+ W+A++P+  E+E   PL W+EE            I     D+D+D +WL++  ++ +   FP  +             F  E FR+AV L  SRSFFV+G LRL P +DFANH     ++   GG   ++GSA   ++++ +  E G+E  +SYGPKG A YL ++GFVPP+      +G  +T EL F +   +RF DDK D+L+     L  +     FD+T    + G PD  ++QFLRL+ L G+D+FLLESIFR E+W FM EPVS +NE     A+   C   L    G    D   +S K+      RLC  VR  ER AL+ T  + + +++ALD KEYYQERRLK L LD  W  E D+V +   R PGG + DW
Sbjct:  169 GYDGWTGDVGLLAMLVLNEMARLNVDGGSDNKGIDLPTRKEGIQSLMSAWVASLPSPVEMEGMHPLMWNEEXXXXXXXXXXXKIYRLLDDIDDDSSWLDEKVWSLDRSTFPESVKIQVGDEVEERPCFSQEGFRYAVSLVRSRSFFVDGSLRLLPYLDFANHDDFDSLELVGGGIGTLWGSAKGALMKSGKALEVGDEIRISYGPKGPADYLLDHGFVPPMCQTTSGTGGAITAELSFEIDDSDRFRDDKLDVLEYETYDLAPMEPLQVFDVTGGPGSTGEPDPAMIQFLRLINLGGKDAFLLESIFRKEIWGFMSEPVSEANERLAVMAVVEACEKALSEMEGPVGGDITSLSEKM------RLCNMVRESERQALERTLIYVKQEAEALDLKEYYQERRLKSLGLDSEWSPENDDVGWAGNRVPGGADYDW 595          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCQ4_9PHAE7.840e-26172.64SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZE37_9STRA1.860e-13047.92Putative ribulose-1,5-bisphosphate carboxylase/oxy... [more]
A0A6S9FGC7_HETAK1.620e-10944.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2NWX9_9STRA2.610e-8741.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2FAY5_9STRA5.200e-8741.27Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A0G4GD31_VITBC1.160e-8640.18SET domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2A866_TRICV4.120e-8439.62Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0QYB9_THAOC7.720e-7739.49Rubis-subs-bind domain-containing protein n=1 Tax=... [more]
A0A7S4T3Q7_9STRA1.800e-7636.95Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8C224_THAPS5.820e-7638.34Rubis-subs-bind domain-containing protein n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036464Rubisco LSMT, substrate-binding domain superfamilyGENE3D3.90.1420.10coord: 350..512
e-value: 9.4E-48
score: 164.1
IPR036464Rubisco LSMT, substrate-binding domain superfamilySUPERFAMILY81822RuBisCo LSMT C-terminal, substrate-binding domaincoord: 342..518
NoneNo IPR availableGENE3D3.90.1410.10coord: 91..344
e-value: 3.6E-42
score: 146.4
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 40..512
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..541
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.72
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 93..346
IPR001214SET domainPFAMPF00856SETcoord: 122..330
e-value: 8.9E-6
score: 26.2
IPR001214SET domainPROSITEPS50280SETcoord: 154..330
score: 9.986
IPR015353Rubisco LSMT, substrate-binding domainPFAMPF09273Rubis-subs-bindcoord: 365..485
e-value: 7.8E-24
score: 84.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:337526..343005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17343.1mRNA_S-latissima_F_contig96.17343.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 337515..343620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17343.1 ID=prot_S-latissima_F_contig96.17343.1|Name=mRNA_S-latissima_F_contig96.17343.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=542bp
MGVLPVLVTAVLTADVFLSLCSRAQAFYVPSSIPSQRRPQCSSSRSSHAK
DAVSHRKHCISGLALVAHPASRRPRAAATPRMAFDPDVTPGVLDAFHAWL
TKSGVKLGDNVVLAGRSPLSGGRGLTTTKAVENGQQVLAMPQSLGVTAAG
VKNSGIAKYLTGYEGWTGDTGVIALQLLWERAQGEKSIMAPWIAAMPAKG
ELEMPLFWDEEDLALADASSTRGISGFSADVDEDYAWLNQNAFAKNPEVF
PADMFGPEDFRWAVGLALSRSFFVNGELRLTPLVDFANHSSSRVVKEPAG
GSTGMFGSAAVVLRAARNYEAGEEFLVSYGPKGAAGYLEENGFVPPVSGS
EVTCELEFTVPADNRFFDDKEDILQLNGLGTSSTFDLTAVGLPDAELVQF
LRLLCLSGEDSFLLESIFRNEVWEFMEEPVSRSNEEAVNEALSTRCNNEL
KGFFGSAKEDEDLMSGKVEATERQRLCASVRRGERVALQMTQKWCETDSK
ALDRKEYYQERRLKDLQLDLPWEVDEVYPTERRPGGGELDW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036464Rubisco_LSMT_subst-bd_sf
IPR001214SET_dom
IPR015353Rubisco_LSMT_subst-bd