prot_S-latissima_F_contig96.17341.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17341.1
Unique Nameprot_S-latissima_F_contig96.17341.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length422
Homology
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 8.490e-168
Identity = 250/399 (62.66%), Postives = 297/399 (74.44%), Query Frame = 0
Query:   25 ETGKCDPGLKYLREINLASEEIEEYEKLARSWIPALIEFEAGSADDGWKTVSTYFGVNVCTIPKPAEDGSNLVVCRGQMPLPAEITLELLRDQFVKVYNDSVTLAQQMRASDPMSRETKILYQLPCEDGEFIRIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSVERPEVPNMEKLCKRIRSTVKTSGYVFRETADG-TIRVTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVKGKLVDTAKACAALKAPPTIWPTAVAWRKNFELPIPRPSAGDAASKVSVKFWADNKVAFRIRGASGGATTGWKSAEAVSDLSEGGWVSYPSQTPVCVEFALQPEVGSMASLGAANGDKVDAADVELHE-KEACVLEWKGSGWFKGFTVFHIVDVA 421
            E GK DPGLK+LREI L  EE   Y  LAR WIP L+ FEA  +D+GWK  ST FGV V + P P +  S+LV+CRGQ+PL  ++T E+++ QFV V+N S  LAQQMRASDPMSRETKILYQ+PCE+GE IRI WGSFKA GVAWARDFCFLQHA  +TD ATGER+FCVV+GS+ERPEVP+MEKLCKRIRSTVKTSG VFRE  DG  +R TYVVNVNPNGWIP+KIVN IC NQAMNVSRVK KL +TAKA AALK    I+P A+ WR+  E P+ RP+ G AAS VSVKF A +KV FR+ GA+  ATT W  AEA + +  G  V+YP+ TP  + F L+PE  S  +     G  V A+DVEL E K + VLEWKG+GWF G  ++H+V+VA
Sbjct:   71 ENGKQDPGLKFLREIQLTPEEDARYASLARGWIPDLVGFEA--SDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATA-ATTDWAPAEASTGVGAGETVTYPADTPTTMTFKLRPEAAS-GNGARRGGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEVA 465          
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: A0A6P8ILE6_ACTTE (uncharacterized protein LOC116302589 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ILE6_ACTTE)

HSP 1 Score: 97.4 bits (241), Expect = 2.260e-18
Identity = 73/242 (30.17%), Postives = 121/242 (50.00%), Query Frame = 0
Query:   35 YLREIN-LASEEIEEYEKLARSWIPALIEFEAGSADDGWKTVSTYFGVNVCTIPKPAEDGSNLVVCRGQMPLPAEITLELLRDQFVKVYNDSVTLAQQMRASDPMSRETKILYQLPCE----DGEFIRIVWGSFKAVGVA-WARDFCFLQHACTTTDAATGERIFCVVAGSVERPEVPNMEKLCKRIRSTVKTSGYVFRETAD--GTIRVTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVK 268
            +L EI  L  EEI+EY KLA++W+  L+  +A ++D G+  + T   V++     P +    + + RGQ  +   +  + +R   +    DS      M   D   ++  +L++ P      D  F  I WG         W RD C+L++     D   G ++   VA S++RPE P ME   K +R+ +  SGYVFR+  D    ++VTY+V  +P GW+P   VN     +A+N++R++
Sbjct:  102 FLGEIPALTEEEIQEYTKLAKTWVQGLL--DASTSDKGFNYICTKENVDIYQGHDPDK---KIQLVRGQTKIKCSV--DEMRAFMIAPTTDSFRRLFHM--IDVHFQDGLVLHRFPTNYKHPDVPFYSIKWGIMGIQSSPLWLRDVCWLEYGDMMNDE-NGVQMGFGVASSIKRPECPTMENY-KLVRADMMCSGYVFRKVPDEPDCMQVTYIVQADPKGWLPKWAVNMFAWQEALNLARIR 332          
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: A0A7R9YNF4_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNF4_DIALT)

HSP 1 Score: 77.8 bits (190), Expect = 5.870e-12
Identity = 41/133 (30.83%), Postives = 75/133 (56.39%), Query Frame = 0
Query:  157 RIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSVERPEVPNMEKLCKRIRSTVKTSGYVFRETADGTIR--VTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVKGKLVDTAKACAALKAPPTI 287
            ++ W  F A      RDFC+L+H  +   A  G R+F  +  SV+R E P+M +    +R+ + ++GYVFR++A+G+    + YVV ++P G +P  +VN +  +QA N + ++  + +   A   L+ P ++
Sbjct:  247 QVEWACFAAPPPLAPRDFCWLEHT-SFARAPDGSRLFFSLCSSVQREEAPDMWQSHGYVRAELTSTGYVFRQSAEGSDDWDLFYVVQIDPKGIVPKWVVNLVATDQAANAAAMRDAVTERTAAEEVLRGPDSL 378          
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: A0A8J5XZB1_DIALT (START domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZB1_DIALT)

HSP 1 Score: 77.8 bits (190), Expect = 9.600e-12
Identity = 41/133 (30.83%), Postives = 75/133 (56.39%), Query Frame = 0
Query:  157 RIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSVERPEVPNMEKLCKRIRSTVKTSGYVFRETADGTIR--VTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVKGKLVDTAKACAALKAPPTI 287
            ++ W  F A      RDFC+L+H  +   A  G R+F  +  SV+R E P+M +    +R+ + ++GYVFR++A+G+    + YVV ++P G +P  +VN +  +QA N + ++  + +   A   L+ P ++
Sbjct:  245 QVEWACFAAPPPLAPRDFCWLEHT-SFARAPDGSRLFFSLCSSVQREEAPDMWQSHGYVRAELTSTGYVFRQSAEGSDDWDLFYVVQIDPKGIVPKWVVNLVATDQAANAAAMRDAVTERTAAEEVLRGPDSL 376          
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: L8H5Y9_ACACA (START domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5Y9_ACACA)

HSP 1 Score: 60.1 bits (144), Expect = 2.930e-6
Identity = 59/218 (27.06%), Postives = 97/218 (44.50%), Query Frame = 0
Query:   68 ADDGWKTVSTYFGVNVCTIPKPAEDGSNLVVC-RGQMPLPAEITLELLRDQFVKV----YNDSVTLAQQMRASDPMSRETKILYQLPCEDGEFIRIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSVERPEVPNMEKLCKRIRSTVKTSGYVFRE------TADGTIRVTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVKGKLVDT 274
            AD+GW       G+ + +   P +     V C RG+  +PA  T E+LR   V+V    Y D + L                 Y++  E    +R+    F A     +RDF  +     T D      +F  V  S+ER ++P  E     +R  +K+SG+V +       T      +TY+V +NP GWIP  +VNT+ ++Q + ++ +K  ++ T
Sbjct:   66 ADEGWVFWKEQDGITIHSKDHPDDP----VRCFRGKGIIPA--TAEVLRLHLVQVDLRKYWDDMFLGG--------------TYKI--ELTPTVRVCNYKFSAPWPVASRDFVIIAGEKITDDG-----LFVTVVNSIERDDIPVEEGF---VRGMLKSSGFVIKPLDNDPVTGKPRCEITYLVQLNPMGWIPTIVVNTVNVSQPLCINTLKNAILLT 253          
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Match: A0A7S4DQV3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DQV3_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 2.850e-5
Identity = 46/168 (27.38%), Postives = 76/168 (45.24%), Query Frame = 0
Query:  120 KVYNDSVTLAQQMRASDPMSRETKILYQLPCEDGEFIRIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSVERP--EVP-NMEKLCKRIRSTVKTSGYVFRETADGTIRVTYVVNVNPNGWIPNKIVNTICMNQAMNVSRVKGKLVDTAKACAALKAP 284
            K +++S   A+ M+ +DPM  + K         G  +   + +F       ARDF F +   T  D +       V A   E P  + P +       IR ++  SGY+ +     T  VTY+V V+P GW+P  +V  +  +QA+NV+R++       K   +L+ P
Sbjct:   74 KFWSESKNWAKHMKIADPMFIKGK-----KQRIGNGLYQNYAAFALPAGVTARDFTFHELIVTLNDNS-------VAAICWEEPWKDYPMDTSYFPSYIRGSIIMSGYLAKPLTPNTCEVTYLVQVDPKGWLPAWVVEVVAPDQALNVTRLRDYFKALRKHMPSLRRP 229          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JFK6_9PHAE8.490e-16862.66START domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6P8ILE6_ACTTE2.260e-1830.17uncharacterized protein LOC116302589 n=1 Tax=Actin... [more]
A0A7R9YNF4_DIALT5.870e-1230.83Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A8J5XZB1_DIALT9.600e-1230.83START domain-containing protein n=1 Tax=Diacronema... [more]
L8H5Y9_ACACA2.930e-627.06START domain containing protein n=1 Tax=Acanthamoe... [more]
A0A7S4DQV3_9EUKA2.850e-527.38Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 71..275
e-value: 2.5E-24
score: 88.1
IPR002913START domainPFAMPF01852STARTcoord: 156..268
e-value: 7.4E-9
score: 35.3
IPR002913START domainPROSITEPS50848STARTcoord: 65..255
score: 13.92
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 50..271
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 50..271
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 64..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:287498..326807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17341.1mRNA_S-latissima_F_contig96.17341.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 287474..326847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17341.1 ID=prot_S-latissima_F_contig96.17341.1|Name=mRNA_S-latissima_F_contig96.17341.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=422bp
MSSNNSVDGSASMDGDDSSFEHDSETGKCDPGLKYLREINLASEEIEEYE
KLARSWIPALIEFEAGSADDGWKTVSTYFGVNVCTIPKPAEDGSNLVVCR
GQMPLPAEITLELLRDQFVKVYNDSVTLAQQMRASDPMSRETKILYQLPC
EDGEFIRIVWGSFKAVGVAWARDFCFLQHACTTTDAATGERIFCVVAGSV
ERPEVPNMEKLCKRIRSTVKTSGYVFRETADGTIRVTYVVNVNPNGWIPN
KIVNTICMNQAMNVSRVKGKLVDTAKACAALKAPPTIWPTAVAWRKNFEL
PIPRPSAGDAASKVSVKFWADNKVAFRIRGASGGATTGWKSAEAVSDLSE
GGWVSYPSQTPVCVEFALQPEVGSMASLGAANGDKVDAADVELHEKEACV
LEWKGSGWFKGFTVFHIVDVA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom