prot_S-latissima_F_contig96.17334.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig96.17334.1
Unique Nameprot_S-latissima_F_contig96.17334.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length360
Homology
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A6H5KIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ2_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.240e-124
Identity = 230/363 (63.36%), Postives = 269/363 (74.10%), Query Frame = 0
Query:    9 LLPFWERETTSDSASKSDEHKHSMILISVPAVLESALRAVARDIDGVDADLREKISRHLPPLEDKEPSAEQTAXXXXXXXXXXXXXXXXKVESGDNVRTGGATRGGEGMALPPSILAKAFPHMRRLMP---SSGGEGAVAKGGGMLGLLQGGGLVFPDAPGNR-AALKQGDERRRYEERRNRLLVLREQKEYARMTSNIQRAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQDAEESHTAVGVHKLAPRP-EPEVAVGGRGVLEEN--DPNRVGGVREYELAPTTGLDEKR----GGVSE-AGVQNVVRG 359
             LP WE  +++++  KS+E   SMILI+VP  LESALRAV RD+DGVD+DLREKIS  LP +ED+E +A    XXXXXX            E  ++   GGA  GG  + L P+ LA+A PH+RRLM      GG+G  A  GG+L LLQGGGLVFPDA G   AA+K G+E+R Y+ERR+RLL+LREQKEY RM  NIQRAPRETVRDIQASFKFQ GMGANMVVA+FTTFIISYWASK+IVG+N SHR+VIGLVG +FIMLVELLVFVTRSLKADEVLE AR+DAEESHTAVGVH+LAPRP EP   +GGRG LE+N    +R G   EYEL PT G DE R    GGVS+  G++ VV G
Sbjct:    7 FLPLWEPSSSANATEKSEEATPSMILIAVPPALESALRAVVRDLDGVDSDLREKISERLPTIEDQEQAAAAXXXXXXXXP-----------EEAESAPAGGARAGGARVTLNPATLARALPHIRRLMARGSGEGGDGHAASLGGLLELLQGGGLVFPDARGAASAAMKHGEEKRAYQERRDRLLLLREQKEYQRMIDNIQRAPRETVRDIQASFKFQVGMGANMVVAVFTTFIISYWASKFIVGDNKSHRLVIGLVGAMFIMLVELLVFVTRSLKADEVLEDARRDAEESHTAVGVHRLAPRPGEP---MGGRGTLEQNRTSSSRRGREGEYELVPTRGEDELREGRGGGVSKPVGIRRVVEG 355          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: D8LUD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUD3_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 5.560e-68
Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 0
Query:  139 GGEGAVAKGGGMLGLLQGGGLVFPDAPGNR-AALKQGDERRRYEERRNRLLVLREQKEYARMTSNIQRAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQ 289
            GG+G  A  GG+LGLLQGGGLVFPDA G   AA+K G+E+R Y+ERR+RLL+LREQKEY RM  NIQRAPRETVRDIQASFKFQ GMGANMVVA+FTTFIISYWASK+IVG+N SHR+VIGLVG +FIMLVELLVFVTRSLKADEVLE AR+
Sbjct:    8 GGDGHAASVGGLLGLLQGGGLVFPDARGAASAAMKHGEEKRAYQERRDRLLLLREQKEYQRMIDNIQRAPRETVRDIQASFKFQVGMGANMVVAVFTTFIISYWASKFIVGDNKSHRLVIGLVGAMFIMLVELLVFVTRSLKADEVLEDARR 159          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A836CG91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG91_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.390e-21
Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 0
Query:  153 LLQGGGLVFPDAPGNRAALKQGDERRRYEERRNRLLVLREQKEYARMTSNIQ--RAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLE-AARQDA 291
            LL+GGGL+FP++   R A K  D +  + +RR  L +  E++EY RMT++I+  R  R    DIQ + KFQA +GANMV+A  T F + YW SKY V  + +HR+  GLVG   I +VE+LVFV R+ +ADE  + AAR+ +
Sbjct:    9 LLRGGGLIFPESVAAREATKHRDAQ--FAQRRQHLELAHEEREYERMTASIRGPRRDRHGPSDIQVTLKFQAAVGANMVLAGLTMFGLCYWVSKYFVSRD-AHRMAAGLVGAFAITVVEMLVFVIRASRADEARDYAARRSS 147          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A1V9Y9U8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9U8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.250e-7
Identity = 38/117 (32.48%), Postives = 68/117 (58.12%), Query Frame = 0
Query:  176 ERRRYEERRNRLLVLREQKEYARMTSNIQRAPRETVRDIQA-SFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQDA 291
            +RR+Y +RR       E+K Y +M   ++R   ++    +  S      +GANM+ AM T F ++Y+ S+ +  N T+ R+++GL  TV +M+VE+++F+ RS K +E+    R+ A
Sbjct:   60 QRRQYLQRRQ------EEKTYNQMLGKLERPKADSAMQREMKSVSQHLSIGANMIAAMATAFFVAYYISRSLTDNETT-RLLVGLAATVAMMVVEMVLFIARSTKQEELARRQRKGA 169          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A5D6XW23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW23_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 9.300e-7
Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 0
Query:  181 EERRNRLLVLREQKEYARMTSNIQ-RAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLE 285
            E+RR +L  L E+  Y R+  N++ +     +   Q S +    +GANMV+A  T FI  Y  ++ +  + T  R+VIGLVG + +M++E+++F+TR+ K  EVLE
Sbjct:  102 EQRRRKLRRLDEEMRYGRLVHNVKSKTQAAELEQFQTSTRQHLSIGANMVMARVTAFIALYMVARVLTDSETM-RVVIGLVGAIVMMVIEMVLFITRAAKY-EVLE 205          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A0P1A7H8_PLAHL (ATPase, vacuolar ER assembly factor, Vma12 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7H8_PLAHL)

HSP 1 Score: 59.7 bits (143), Expect = 9.430e-7
Identity = 35/102 (34.31%), Postives = 64/102 (62.75%), Query Frame = 0
Query:  183 RRNRLLVLREQKEYARMTSNIQ-RAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEV 283
            RR +L  L E+  Y+ M  N++ R+  + +   Q + +    +GANMV+A  T FI  Y+ ++ +  N T+ R+V GLVG +F+M++E+++F+TR+ K + +
Sbjct:  106 RRRKLQRLDEEMRYSSMVRNVKTRSVDKELLHHQTNIRQHLSIGANMVMARLTAFIAVYFLARNLTQNETT-RLVAGLVGAIFMMIIEMILFITRAAKIESI 206          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A067BM81_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BM81_SAPPC)

HSP 1 Score: 58.5 bits (140), Expect = 1.180e-6
Identity = 41/123 (33.33%), Postives = 72/123 (58.54%), Query Frame = 0
Query:  177 RRRYEERRNRLLVLREQKEYARMTSNIQRAPRETVRDIQASFKFQA---GMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQDAEESHT 296
            RR+Y +RR       E+K Y +M   ++R   ++  D+Q   K  +    +GANM+  M T F ++Y+ ++ +  N TS R+++GL  T+ +M+VE+++++TRS K +E+  A RQ   E  T
Sbjct:   61 RRQYLQRRQ------EEKSYNQMLGKLERPKADS--DMQREMKSVSQHLSIGANMIAGMATAFFVAYYIARSVTDNETS-RLLMGLAATIAMMVVEMVLYITRSTKQEEL--ARRQRKSEGRT 172          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A024TYG1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYG1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.950e-6
Identity = 37/128 (28.91%), Postives = 74/128 (57.81%), Query Frame = 0
Query:  166 GNRAALKQGDERRRY-EERRNRLLVLREQKEYARMTSNIQRAPRETVRDIQASFKF---QAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQ 289
            G  +  ++  +R +Y E RR  L  ++E+KEY +M   + +  R++  ++Q   K       +G NM+ AM T F ++Y+ S+ +  N T+ R++ GL G + +M+VE+++++ R+ K +E+    R+
Sbjct:   44 GENSEQRENAKRTKYLETRRQYLQRVQEEKEYNKMLGKLSKPKRDS--EMQKEMKSVTQHVSIGINMIAAMATAFFVAYYISRTVTDNETT-RLLAGLAGAISMMMVEMVLYMARATKQEELARIMRK 168          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A6G0X2X7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2X7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.720e-5
Identity = 32/110 (29.09%), Postives = 66/110 (60.00%), Query Frame = 0
Query:  183 RRNRLLVLREQKEYARMTSNIQRAPRETVRDIQASFKF---QAGMGANMVVAMFTTFIISYWASKYIVGNNTSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQ 289
            RR  L  ++++KEY +M  +I +  R+   D+Q   K       +G NM+ AM T F ++Y+ ++ +  + T+ +++ GL G + +M+VE+++++ R+ K +E+   AR+
Sbjct:   64 RRQYLQRIQDEKEYNQMLGSISKPKRD--HDMQKEMKSVTQHVSIGLNMIAAMATAFFVAYYVARTVTQDETT-KLLAGLAGAIAMMMVEMVLYMARATKQEELARIARK 170          
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Match: A0A225X0Y7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0Y7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.740e-5
Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0
Query:  175 DERRRY-EERRNRLLVLREQKEYARMTSNI--QRAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNNTS-HRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQ 289
            D+R +Y  +RR +L  L E+  Y  M  N+  Q A  E  +  Q S +    +GANMV+A  T FI  Y+ ++ +  N T+  R+V GL G V +M++E+++F+TR+ K + +    R+
Sbjct:   94 DQRAKYLAKRRLKLQRLDEEMRYGSMVRNVKTQSAAAELAQH-QTSVRQHLSIGANMVMARITAFIAVYFVARNLTQNETTVRRLVAGLGGAVVMMVIEMVLFITRAAKFESIEHRQRK 211          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig96.17334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KIJ2_9PHAE1.240e-12463.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUD3_ECTSI5.560e-6879.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CG91_9STRA1.390e-2145.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9Y9U8_9STRA6.250e-732.48Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A5D6XW23_9STRA9.300e-736.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1A7H8_PLAHL9.430e-734.31ATPase, vacuolar ER assembly factor, Vma12 n=1 Tax... [more]
A0A067BM81_SAPPC1.180e-633.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024TYG1_9STRA3.950e-628.91Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0X2X7_9STRA4.720e-529.09Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A225X0Y7_9STRA4.740e-534.45Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021013ATPase, vacuolar ER assembly factor, Vma12PFAMPF11712Vma12coord: 152..279
e-value: 4.2E-12
score: 46.3
IPR021013ATPase, vacuolar ER assembly factor, Vma12PANTHERPTHR31394FAMILY NOT NAMEDcoord: 153..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..359
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..254
NoneNo IPR availableTMHMMTMhelixcoord: 220..242
NoneNo IPR availableTMHMMTMhelixcoord: 255..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig96contigS-latissima_F_contig96:146479..167135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig96.17334.1mRNA_S-latissima_F_contig96.17334.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig96 146479..167209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig96.17334.1 ID=prot_S-latissima_F_contig96.17334.1|Name=mRNA_S-latissima_F_contig96.17334.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=360bp
MLSEDREPLLPFWERETTSDSASKSDEHKHSMILISVPAVLESALRAVAR
DIDGVDADLREKISRHLPPLEDKEPSAEQTAAAAAAATAAAAAAAAAKVE
SGDNVRTGGATRGGEGMALPPSILAKAFPHMRRLMPSSGGEGAVAKGGGM
LGLLQGGGLVFPDAPGNRAALKQGDERRRYEERRNRLLVLREQKEYARMT
SNIQRAPRETVRDIQASFKFQAGMGANMVVAMFTTFIISYWASKYIVGNN
TSHRIVIGLVGTVFIMLVELLVFVTRSLKADEVLEAARQDAEESHTAVGV
HKLAPRPEPEVAVGGRGVLEENDPNRVGGVREYELAPTTGLDEKRGGVSE
AGVQNVVRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021013ATPase_Vma12